Genomic map of Mycobacterium virus Boomer (NC_011054)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_011054
Definition
Mycobacterium phage Boomer, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus.
DB of origin
REFSEQ
Length
58037
Host Name
Mycobacterium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
105
%GC
61.12
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_002014247.1 NC_011054_p31 hypothetical protein phrog_5492 unknown function unknown function 1 26105 26278
YP_002014250.1 NC_011054_p34 holin phrog_443 holin lysis 1 28593 28826
YP_002014256.1 NC_011054_p40 hypothetical protein phrog_7480 unknown function unknown function -1 31115 31324
YP_002014258.1 NC_011054_p42 hypothetical protein phrog_2437 unknown function unknown function -1 31769 31942
YP_002014267.1 NC_011054_p51 hypothetical protein phrog_2025 unknown function unknown function 1 37307 37522
YP_002014236.1 NC_011054_p20 hypothetical protein phrog_382 minor tail protein with lysin activity tail 1 19746 21632
YP_002014301.1 NC_011054_p85 hypothetical protein phrog_647 unknown function unknown function 1 49678 49962
YP_002014230.1 NC_011054_p14 hypothetical protein phrog_15976 tail assembly chaperone tail 1 8822 9325
YP_002014229.1 NC_011054_p13 hypothetical protein phrog_621 tail assembly chaperone tail 1 8296 8940
YP_002014227.1 NC_011054_p11 hypothetical protein phrog_813 head-tail adaptor connector 1 6948 7352
YP_002014262.1 NC_011054_p46 integrase phrog_1 integrase integration and excision 1 33186 34475
YP_002014245.1 NC_011054_p29 hypothetical protein phrog_1172 unknown function unknown function 1 25673 25813
YP_002014222.1 NC_011054_p6 scaffold protein phrog_4638 head scaffolding protein head and packaging 1 4408 4944
YP_002014234.1 NC_011054_p18 hypothetical protein phrog_732 minor tail protein tail 1 16367 17215
YP_002014315.1 NC_011054_p99 hypothetical protein singleton unknown function unknown function 1 54009 54398
YP_002014304.1 NC_011054_p88 hypothetical protein phrog_13181 unknown function unknown function 1 50735 50950
YP_002014309.1 NC_011054_p93 hypothetical protein phrog_10901 unknown function unknown function 1 52083 52358
YP_002014249.1 NC_011054_p33 LysB phrog_102 endolysin lysis 1 27576 28577
YP_002014274.1 NC_011054_p58 hypothetical protein phrog_1797 unknown function unknown function 1 39232 39855
YP_002014284.1 NC_011054_p68 hypothetical protein phrog_2632 unknown function unknown function 1 43345 43614
YP_002014303.1 NC_011054_p87 hypothetical protein phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover 1 50213 50584
YP_002014296.1 NC_011054_p80 hypothetical protein phrog_1943 unknown function unknown function 1 48517 48711
YP_002014219.1 NC_011054_p3 terminase phrog_2 terminase large subunit head and packaging 1 797 2158
YP_002014306.1 NC_011054_p90 hypothetical protein phrog_6540 unknown function unknown function 1 51135 51431
YP_002014313.1 NC_011054_p97 hypothetical protein phrog_2474 MerR-like transcriptional regulator transcription regulation 1 53595 53819
YP_002014285.1 NC_011054_p69 hypothetical protein phrog_3290 single strand annealing protein DNA, RNA and nucleotide metabolism 1 43611 44189
YP_002014307.1 NC_011054_p91 hypothetical protein phrog_1545 unknown function unknown function 1 51589 51744
YP_002014291.1 NC_011054_p75 hypothetical protein phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 1 46670 47575
YP_002014261.1 NC_011054_p45 hypothetical protein phrog_7147 unknown function unknown function -1 32481 32801
YP_002014242.1 NC_011054_p26 hypothetical protein phrog_37923 unknown function unknown function 1 24970 25131
YP_002014268.1 NC_011054_p52 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 37608 37805
YP_002014271.1 NC_011054_p55 hypothetical protein phrog_27299 unknown function unknown function 1 38417 38641
YP_002014286.1 NC_011054_p70 HNHc phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44186 44542
YP_002014244.1 NC_011054_p28 hypothetical protein phrog_932 unknown function unknown function 1 25527 25676
YP_002014293.1 NC_011054_p77 hypothetical protein phrog_2080 unknown function unknown function 1 47927 48151
YP_002014282.1 NC_011054_p66 hypothetical protein phrog_2078 unknown function unknown function 1 42969 43127
YP_002014232.1 NC_011054_p16 hypothetical protein phrog_106 minor tail protein tail 1 12829 14538
YP_002014243.1 NC_011054_p27 hypothetical protein phrog_411 unknown function unknown function 1 25224 25520
YP_002014318.1 NC_011054_p102 glycosyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 55216 56655
YP_002014224.1 NC_011054_p8 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 5928 6299
YP_002014266.1 NC_011054_p50 hypothetical protein phrog_130 anti-repressor Ant transcription regulation 1 36306 37310
YP_002014269.1 NC_011054_p53 hypothetical protein phrog_2021 unknown function unknown function 1 37849 38232
YP_002014231.1 NC_011054_p15 tape measure protein phrog_1942 tail length tape measure protein tail 1 9322 12828
YP_002014298.1 NC_011054_p82 hypothetical protein phrog_2591 unknown function unknown function 1 49129 49314
YP_002014238.1 NC_011054_p22 hypothetical protein phrog_240 head protein head and packaging 1 22813 23154
YP_002014302.1 NC_011054_p86 hypothetical protein phrog_722 unknown function unknown function 1 49955 50143
YP_002014235.1 NC_011054_p19 hypothetical protein phrog_346 minor tail protein tail 1 17212 19749
YP_002014246.1 NC_011054_p30 hypothetical protein phrog_747 unknown function unknown function 1 25887 26108
YP_002014253.1 NC_011054_p37 exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 29442 30263
YP_002014225.1 NC_011054_p9 hypothetical protein phrog_763 head-tail adaptor connector 1 6296 6625
YP_002014221.1 NC_011054_p5 head assembly protein phrog_193 head maturation protease head and packaging 1 3604 4329
YP_002014272.1 NC_011054_p56 hypothetical protein phrog_24657 unknown function unknown function 1 38638 38985
YP_002014217.1 NC_011054_p1 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41 373
YP_002014319.1 NC_011054_p103 hypothetical protein phrog_3297 kinase other 1 56660 57130
YP_002014239.1 NC_011054_p23 hypothetical protein phrog_2005 minor tail protein tail 1 23177 23431
YP_002014223.1 NC_011054_p7 hypothetical protein phrog_10 major head protein head and packaging 1 5007 5915
YP_002014308.1 NC_011054_p92 hypothetical protein phrog_5186 unknown function unknown function 1 51741 51914
YP_002014279.1 NC_011054_p63 hypothetical protein phrog_2096 unknown function unknown function 1 41835 42329
YP_002014281.1 NC_011054_p65 hypothetical protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 42607 42972
YP_002014289.1 NC_011054_p73 hypothetical protein phrog_1311 unknown function unknown function 1 46160 46336
YP_002014270.1 NC_011054_p54 hypothetical protein phrog_1816 unknown function unknown function 1 38229 38420
YP_002014295.1 NC_011054_p79 hypothetical protein phrog_11384 unknown function unknown function 1 48233 48520
YP_002014251.1 NC_011054_p35 hypothetical protein phrog_404 minor tail protein tail 1 28823 29197
YP_002014260.1 NC_011054_p44 hypothetical protein singleton unknown function unknown function -1 32155 32361
YP_002014252.1 NC_011054_p36 hypothetical protein phrog_2004 unknown function unknown function 1 29222 29455
YP_002014241.1 NC_011054_p25 hypothetical protein phrog_754 minor tail protein tail 1 24077 24886
YP_002014320.1 NC_011054_p104 hypothetical protein phrog_1693 unknown function unknown function 1 57133 57339
YP_002014264.1 NC_011054_p48 hypothetical protein phrog_2838 transcriptional repressor transcription regulation -1 35276 36022
YP_002014218.1 NC_011054_p2 hypothetical protein phrog_4479 terminase small subunit head and packaging 1 445 699
YP_002014255.1 NC_011054_p39 hypothetical protein phrog_35991 unknown function unknown function 1 30801 31001
YP_002014237.1 NC_011054_p21 hypothetical protein phrog_2106 minor tail protein tail 1 21629 22795
YP_002014297.1 NC_011054_p81 hypothetical protein phrog_1573 DNA methyltransferase other 1 48708 49136
YP_002014287.1 NC_011054_p71 hypothetical protein phrog_2070 unknown function unknown function 1 44539 44742
YP_002014240.1 NC_011054_p24 hypothetical protein phrog_2012 minor tail protein tail 1 23382 24080
YP_002014278.1 NC_011054_p62 hypothetical protein phrog_1333 unknown function unknown function 1 41344 41847
YP_002014294.1 NC_011054_p78 hypothetical protein phrog_9299 unknown function unknown function 1 48148 48240
YP_002014228.1 NC_011054_p12 major tail subunit phrog_476 major tail protein tail 1 7386 8270
YP_002014257.1 NC_011054_p41 hypothetical protein phrog_5648 unknown function unknown function -1 31428 31787
YP_002014321.1 NC_011054_p105 hypothetical protein phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 57336 57947
YP_002014259.1 NC_011054_p43 hypothetical protein phrog_5497 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 31924 32154
YP_002014248.1 NC_011054_p32 LysA phrog_700 endolysin lysis 1 26275 27576
YP_002014300.1 NC_011054_p84 hypothetical protein phrog_3447 unknown function unknown function 1 49469 49681
YP_002014273.1 NC_011054_p57 hypothetical protein phrog_780 unknown function unknown function 1 38978 39235
YP_002014226.1 NC_011054_p10 hypothetical protein phrog_1929 head-tail connector protein connector 1 6632 6958
YP_002014311.1 NC_011054_p95 hypothetical protein phrog_2247 unknown function unknown function 1 52597 52851
YP_002014317.1 NC_011054_p101 hypothetical protein phrog_1385 unknown function unknown function 1 54793 55035
YP_002014292.1 NC_011054_p76 hypothetical protein phrog_4296 unknown function unknown function 1 47572 47934
YP_002014233.1 NC_011054_p17 hypothetical protein phrog_110 minor tail protein tail 1 14621 16330
YP_002014254.1 NC_011054_p38 hypothetical protein phrog_1791 unknown function unknown function 1 30281 30571
YP_002014314.1 NC_011054_p98 hypothetical protein phrog_1869 unknown function unknown function 1 53816 53980
YP_002014290.1 NC_011054_p74 hypothetical protein phrog_5500 unknown function unknown function 1 46449 46673
YP_002014277.1 NC_011054_p61 WhiB phrog_658 unknown function unknown function 1 41006 41353
YP_002014312.1 NC_011054_p96 hypothetical protein phrog_1467 unknown function unknown function 1 52848 53486
YP_002014265.1 NC_011054_p49 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 36015 36248
YP_002014305.1 NC_011054_p89 hypothetical protein phrog_1901 unknown function unknown function 1 50947 51138
YP_002014299.1 NC_011054_p83 hypothetical protein phrog_3647 unknown function unknown function 1 49311 49472
YP_002014288.1 NC_011054_p72 DNA methylase phrog_116 DNA methyltransferase other 1 44736 46163
YP_002014276.1 NC_011054_p60 hypothetical protein phrog_1849 unknown function unknown function 1 40731 41009
YP_002014220.1 NC_011054_p4 portal protein phrog_104 portal protein head and packaging 1 2199 3620
YP_002014263.1 NC_011054_p47 hypothetical protein phrog_29286 unknown function unknown function -1 34556 34813
YP_002014316.1 NC_011054_p100 hypothetical protein phrog_1186 unknown function unknown function 1 54380 54796
YP_002014280.1 NC_011054_p64 hypothetical protein phrog_472 WhiB transcriptional factor transcription regulation 1 42326 42610
YP_002014275.1 NC_011054_p59 hypothetical protein phrog_3416 unknown function unknown function 1 39890 40651
YP_002014283.1 NC_011054_p67 hypothetical protein phrog_1834 unknown function unknown function 1 43127 43357
YP_002014310.1 NC_011054_p94 hypothetical protein phrog_6816 unknown function unknown function 1 52358 52600