| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_011054 |
Definition |
Mycobacterium phage Boomer, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus. |
DB of origin |
REFSEQ |
Length |
58037 |
Host Name |
Mycobacterium |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
105 |
%GC |
61.12 |
Number of singletons |
2 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_002014247.1 | NC_011054_p31 | hypothetical protein | phrog_5492 | unknown function | unknown function | 1 | 26105 | 26278 |
| YP_002014250.1 | NC_011054_p34 | holin | phrog_443 | holin | lysis | 1 | 28593 | 28826 |
| YP_002014256.1 | NC_011054_p40 | hypothetical protein | phrog_7480 | unknown function | unknown function | -1 | 31115 | 31324 |
| YP_002014258.1 | NC_011054_p42 | hypothetical protein | phrog_2437 | unknown function | unknown function | -1 | 31769 | 31942 |
| YP_002014267.1 | NC_011054_p51 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 37307 | 37522 |
| YP_002014236.1 | NC_011054_p20 | hypothetical protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 19746 | 21632 |
| YP_002014301.1 | NC_011054_p85 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 49678 | 49962 |
| YP_002014230.1 | NC_011054_p14 | hypothetical protein | phrog_15976 | tail assembly chaperone | tail | 1 | 8822 | 9325 |
| YP_002014229.1 | NC_011054_p13 | hypothetical protein | phrog_621 | tail assembly chaperone | tail | 1 | 8296 | 8940 |
| YP_002014227.1 | NC_011054_p11 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 6948 | 7352 |
| YP_002014262.1 | NC_011054_p46 | integrase | phrog_1 | integrase | integration and excision | 1 | 33186 | 34475 |
| YP_002014245.1 | NC_011054_p29 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 25673 | 25813 |
| YP_002014222.1 | NC_011054_p6 | scaffold protein | phrog_4638 | head scaffolding protein | head and packaging | 1 | 4408 | 4944 |
| YP_002014234.1 | NC_011054_p18 | hypothetical protein | phrog_732 | minor tail protein | tail | 1 | 16367 | 17215 |
| YP_002014315.1 | NC_011054_p99 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54009 | 54398 |
| YP_002014304.1 | NC_011054_p88 | hypothetical protein | phrog_13181 | unknown function | unknown function | 1 | 50735 | 50950 |
| YP_002014309.1 | NC_011054_p93 | hypothetical protein | phrog_10901 | unknown function | unknown function | 1 | 52083 | 52358 |
| YP_002014249.1 | NC_011054_p33 | LysB | phrog_102 | endolysin | lysis | 1 | 27576 | 28577 |
| YP_002014274.1 | NC_011054_p58 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 39232 | 39855 |
| YP_002014284.1 | NC_011054_p68 | hypothetical protein | phrog_2632 | unknown function | unknown function | 1 | 43345 | 43614 |
| YP_002014303.1 | NC_011054_p87 | hypothetical protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 50213 | 50584 |
| YP_002014296.1 | NC_011054_p80 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 48517 | 48711 |
| YP_002014219.1 | NC_011054_p3 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 797 | 2158 |
| YP_002014306.1 | NC_011054_p90 | hypothetical protein | phrog_6540 | unknown function | unknown function | 1 | 51135 | 51431 |
| YP_002014313.1 | NC_011054_p97 | hypothetical protein | phrog_2474 | MerR-like transcriptional regulator | transcription regulation | 1 | 53595 | 53819 |
| YP_002014285.1 | NC_011054_p69 | hypothetical protein | phrog_3290 | single strand annealing protein | DNA, RNA and nucleotide metabolism | 1 | 43611 | 44189 |
| YP_002014307.1 | NC_011054_p91 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 51589 | 51744 |
| YP_002014291.1 | NC_011054_p75 | hypothetical protein | phrog_2149 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 46670 | 47575 |
| YP_002014261.1 | NC_011054_p45 | hypothetical protein | phrog_7147 | unknown function | unknown function | -1 | 32481 | 32801 |
| YP_002014242.1 | NC_011054_p26 | hypothetical protein | phrog_37923 | unknown function | unknown function | 1 | 24970 | 25131 |
| YP_002014268.1 | NC_011054_p52 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 37608 | 37805 |
| YP_002014271.1 | NC_011054_p55 | hypothetical protein | phrog_27299 | unknown function | unknown function | 1 | 38417 | 38641 |
| YP_002014286.1 | NC_011054_p70 | HNHc | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44186 | 44542 |
| YP_002014244.1 | NC_011054_p28 | hypothetical protein | phrog_932 | unknown function | unknown function | 1 | 25527 | 25676 |
| YP_002014293.1 | NC_011054_p77 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 47927 | 48151 |
| YP_002014282.1 | NC_011054_p66 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 42969 | 43127 |
| YP_002014232.1 | NC_011054_p16 | hypothetical protein | phrog_106 | minor tail protein | tail | 1 | 12829 | 14538 |
| YP_002014243.1 | NC_011054_p27 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 25224 | 25520 |
| YP_002014318.1 | NC_011054_p102 | glycosyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 55216 | 56655 |
| YP_002014224.1 | NC_011054_p8 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 5928 | 6299 |
| YP_002014266.1 | NC_011054_p50 | hypothetical protein | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 36306 | 37310 |
| YP_002014269.1 | NC_011054_p53 | hypothetical protein | phrog_2021 | unknown function | unknown function | 1 | 37849 | 38232 |
| YP_002014231.1 | NC_011054_p15 | tape measure protein | phrog_1942 | tail length tape measure protein | tail | 1 | 9322 | 12828 |
| YP_002014298.1 | NC_011054_p82 | hypothetical protein | phrog_2591 | unknown function | unknown function | 1 | 49129 | 49314 |
| YP_002014238.1 | NC_011054_p22 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 22813 | 23154 |
| YP_002014302.1 | NC_011054_p86 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 49955 | 50143 |
| YP_002014235.1 | NC_011054_p19 | hypothetical protein | phrog_346 | minor tail protein | tail | 1 | 17212 | 19749 |
| YP_002014246.1 | NC_011054_p30 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 25887 | 26108 |
| YP_002014253.1 | NC_011054_p37 | exonuclease | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29442 | 30263 |
| YP_002014225.1 | NC_011054_p9 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 6296 | 6625 |
| YP_002014221.1 | NC_011054_p5 | head assembly protein | phrog_193 | head maturation protease | head and packaging | 1 | 3604 | 4329 |
| YP_002014272.1 | NC_011054_p56 | hypothetical protein | phrog_24657 | unknown function | unknown function | 1 | 38638 | 38985 |
| YP_002014217.1 | NC_011054_p1 | hypothetical protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41 | 373 |
| YP_002014319.1 | NC_011054_p103 | hypothetical protein | phrog_3297 | kinase | other | 1 | 56660 | 57130 |
| YP_002014239.1 | NC_011054_p23 | hypothetical protein | phrog_2005 | minor tail protein | tail | 1 | 23177 | 23431 |
| YP_002014223.1 | NC_011054_p7 | hypothetical protein | phrog_10 | major head protein | head and packaging | 1 | 5007 | 5915 |
| YP_002014308.1 | NC_011054_p92 | hypothetical protein | phrog_5186 | unknown function | unknown function | 1 | 51741 | 51914 |
| YP_002014279.1 | NC_011054_p63 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 41835 | 42329 |
| YP_002014281.1 | NC_011054_p65 | hypothetical protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 42607 | 42972 |
| YP_002014289.1 | NC_011054_p73 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 46160 | 46336 |
| YP_002014270.1 | NC_011054_p54 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 38229 | 38420 |
| YP_002014295.1 | NC_011054_p79 | hypothetical protein | phrog_11384 | unknown function | unknown function | 1 | 48233 | 48520 |
| YP_002014251.1 | NC_011054_p35 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 28823 | 29197 |
| YP_002014260.1 | NC_011054_p44 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32155 | 32361 |
| YP_002014252.1 | NC_011054_p36 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 29222 | 29455 |
| YP_002014241.1 | NC_011054_p25 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 24077 | 24886 |
| YP_002014320.1 | NC_011054_p104 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 57133 | 57339 |
| YP_002014264.1 | NC_011054_p48 | hypothetical protein | phrog_2838 | transcriptional repressor | transcription regulation | -1 | 35276 | 36022 |
| YP_002014218.1 | NC_011054_p2 | hypothetical protein | phrog_4479 | terminase small subunit | head and packaging | 1 | 445 | 699 |
| YP_002014255.1 | NC_011054_p39 | hypothetical protein | phrog_35991 | unknown function | unknown function | 1 | 30801 | 31001 |
| YP_002014237.1 | NC_011054_p21 | hypothetical protein | phrog_2106 | minor tail protein | tail | 1 | 21629 | 22795 |
| YP_002014297.1 | NC_011054_p81 | hypothetical protein | phrog_1573 | DNA methyltransferase | other | 1 | 48708 | 49136 |
| YP_002014287.1 | NC_011054_p71 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 44539 | 44742 |
| YP_002014240.1 | NC_011054_p24 | hypothetical protein | phrog_2012 | minor tail protein | tail | 1 | 23382 | 24080 |
| YP_002014278.1 | NC_011054_p62 | hypothetical protein | phrog_1333 | unknown function | unknown function | 1 | 41344 | 41847 |
| YP_002014294.1 | NC_011054_p78 | hypothetical protein | phrog_9299 | unknown function | unknown function | 1 | 48148 | 48240 |
| YP_002014228.1 | NC_011054_p12 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 7386 | 8270 |
| YP_002014257.1 | NC_011054_p41 | hypothetical protein | phrog_5648 | unknown function | unknown function | -1 | 31428 | 31787 |
| YP_002014321.1 | NC_011054_p105 | hypothetical protein | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 57336 | 57947 |
| YP_002014259.1 | NC_011054_p43 | hypothetical protein | phrog_5497 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 31924 | 32154 |
| YP_002014248.1 | NC_011054_p32 | LysA | phrog_700 | endolysin | lysis | 1 | 26275 | 27576 |
| YP_002014300.1 | NC_011054_p84 | hypothetical protein | phrog_3447 | unknown function | unknown function | 1 | 49469 | 49681 |
| YP_002014273.1 | NC_011054_p57 | hypothetical protein | phrog_780 | unknown function | unknown function | 1 | 38978 | 39235 |
| YP_002014226.1 | NC_011054_p10 | hypothetical protein | phrog_1929 | head-tail connector protein | connector | 1 | 6632 | 6958 |
| YP_002014311.1 | NC_011054_p95 | hypothetical protein | phrog_2247 | unknown function | unknown function | 1 | 52597 | 52851 |
| YP_002014317.1 | NC_011054_p101 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 54793 | 55035 |
| YP_002014292.1 | NC_011054_p76 | hypothetical protein | phrog_4296 | unknown function | unknown function | 1 | 47572 | 47934 |
| YP_002014233.1 | NC_011054_p17 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 14621 | 16330 |
| YP_002014254.1 | NC_011054_p38 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 30281 | 30571 |
| YP_002014314.1 | NC_011054_p98 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 53816 | 53980 |
| YP_002014290.1 | NC_011054_p74 | hypothetical protein | phrog_5500 | unknown function | unknown function | 1 | 46449 | 46673 |
| YP_002014277.1 | NC_011054_p61 | WhiB | phrog_658 | unknown function | unknown function | 1 | 41006 | 41353 |
| YP_002014312.1 | NC_011054_p96 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 52848 | 53486 |
| YP_002014265.1 | NC_011054_p49 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 36015 | 36248 |
| YP_002014305.1 | NC_011054_p89 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 50947 | 51138 |
| YP_002014299.1 | NC_011054_p83 | hypothetical protein | phrog_3647 | unknown function | unknown function | 1 | 49311 | 49472 |
| YP_002014288.1 | NC_011054_p72 | DNA methylase | phrog_116 | DNA methyltransferase | other | 1 | 44736 | 46163 |
| YP_002014276.1 | NC_011054_p60 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 40731 | 41009 |
| YP_002014220.1 | NC_011054_p4 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2199 | 3620 |
| YP_002014263.1 | NC_011054_p47 | hypothetical protein | phrog_29286 | unknown function | unknown function | -1 | 34556 | 34813 |
| YP_002014316.1 | NC_011054_p100 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 54380 | 54796 |
| YP_002014280.1 | NC_011054_p64 | hypothetical protein | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 42326 | 42610 |
| YP_002014275.1 | NC_011054_p59 | hypothetical protein | phrog_3416 | unknown function | unknown function | 1 | 39890 | 40651 |
| YP_002014283.1 | NC_011054_p67 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 43127 | 43357 |
| YP_002014310.1 | NC_011054_p94 | hypothetical protein | phrog_6816 | unknown function | unknown function | 1 | 52358 | 52600 |