| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_011055 |
Definition |
Mycobacterium phage Porky, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus. |
DB of origin |
REFSEQ |
Length |
76312 |
Host Name |
Mycobacterium |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
147 |
%GC |
62.84 |
Number of singletons |
2 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_002014453.1 | NC_011055_p132 | hypothetical protein | phrog_9837 | unknown function | unknown function | -1 | 71233 | 71595 |
| YP_002014468.1 | NC_011055_p147 | hypothetical protein | phrog_8627 | unknown function | unknown function | 1 | 75786 | 76199 |
| YP_002014374.1 | NC_011055_p53 | Msmeg_3136 | phrog_950 | unknown function | unknown function | -1 | 38535 | 39308 |
| YP_002014356.1 | NC_011055_p35 | LysB | phrog_102 | endolysin | lysis | 1 | 31695 | 32552 |
| YP_002014442.1 | NC_011055_p121 | hypothetical protein | phrog_2296 | unknown function | unknown function | 1 | 68028 | 68165 |
| YP_002014349.1 | NC_011055_p28 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 27355 | 28317 |
| YP_002014348.1 | NC_011055_p27 | hypothetical protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 24514 | 27354 |
| YP_002014444.1 | NC_011055_p123 | hypothetical protein | phrog_2897 | unknown function | unknown function | 1 | 68341 | 68472 |
| YP_002014457.1 | NC_011055_p136 | hypothetical protein | phrog_2287 | unknown function | unknown function | -1 | 72380 | 72586 |
| YP_002014377.1 | NC_011055_p56 | hypothetical protein | phrog_2852 | unknown function | unknown function | 1 | 40155 | 40292 |
| YP_002014372.1 | NC_011055_p51 | integrase | phrog_1 | integrase | integration and excision | 1 | 37298 | 38179 |
| YP_002014379.1 | NC_011055_p58 | hypothetical protein | phrog_2463 | unknown function | unknown function | 1 | 41136 | 41282 |
| YP_002014369.1 | NC_011055_p48 | hypothetical protein | phrog_2759 | unknown function | unknown function | -1 | 36064 | 36459 |
| YP_002014383.1 | NC_011055_p62 | hypothetical protein | phrog_3463 | unknown function | unknown function | 1 | 42425 | 42532 |
| YP_002014467.1 | NC_011055_p146 | hypothetical protein | phrog_2762 | unknown function | unknown function | 1 | 75520 | 75741 |
| YP_002014363.1 | NC_011055_p42 | hypothetical protein | phrog_647 | unknown function | unknown function | -1 | 34549 | 34896 |
| YP_002014328.1 | NC_011055_p7 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1834 | 3504 |
| YP_002014419.1 | NC_011055_p98 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 57668 | 58927 |
| YP_002014359.1 | NC_011055_p38 | Lsr2 | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 33496 | 33882 |
| YP_002014358.1 | NC_011055_p37 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 32972 | 33217 |
| YP_002014366.1 | NC_011055_p45 | hypothetical protein | phrog_2893 | unknown function | unknown function | -1 | 35422 | 35625 |
| YP_002014460.1 | NC_011055_p139 | hypothetical protein | phrog_4496 | unknown function | unknown function | -1 | 73584 | 73937 |
| YP_002014355.1 | NC_011055_p34 | hypothetical protein | phrog_2424 | unknown function | unknown function | 1 | 31360 | 31698 |
| YP_002014345.1 | NC_011055_p24 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 19667 | 21262 |
| YP_002014398.1 | NC_011055_p77 | hypothetical protein | phrog_1673 | unknown function | unknown function | 1 | 48207 | 48443 |
| YP_002014439.1 | NC_011055_p118 | hypothetical protein | phrog_2174 | unknown function | unknown function | 1 | 67222 | 67683 |
| YP_002014336.1 | NC_011055_p15 | hypothetical protein | phrog_2805 | minor tail protein | tail | 1 | 9371 | 9751 |
| YP_002014402.1 | NC_011055_p81 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 50671 | 50859 |
| YP_002014459.1 | NC_011055_p138 | hypothetical protein | phrog_3174 | unknown function | unknown function | -1 | 73184 | 73579 |
| YP_002014367.1 | NC_011055_p46 | hypothetical protein | phrog_2702 | unknown function | unknown function | -1 | 35684 | 35899 |
| YP_002014353.1 | NC_011055_p32 | LysA | phrog_317 | endolysin | lysis | 1 | 29478 | 30980 |
| YP_002014408.1 | NC_011055_p87 | 5'-hydroxyl kinase, a 3'-phosphatase and a 2',3'-cyclic phosphodiesterase | phrog_505 | polynucleotide kinase | other | 1 | 52375 | 53316 |
| YP_002014333.1 | NC_011055_p12 | hypothetical protein | phrog_2796 | head-tail connector protein | connector | 1 | 8279 | 8458 |
| YP_002014382.1 | NC_011055_p61 | hypothetical protein | phrog_2744 | unknown function | unknown function | 1 | 42101 | 42406 |
| YP_002014436.1 | NC_011055_p115 | hypothetical protein | phrog_3167 | unknown function | unknown function | 1 | 66236 | 66577 |
| YP_002014411.1 | NC_011055_p90 | RNA ligase | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 53605 | 54930 |
| YP_002014422.1 | NC_011055_p101 | hypothetical protein | phrog_2785 | unknown function | unknown function | 1 | 60253 | 60609 |
| YP_002014414.1 | NC_011055_p93 | hypothetical protein | phrog_2853 | unknown function | unknown function | 1 | 56062 | 56220 |
| YP_002014364.1 | NC_011055_p43 | hypothetical protein | phrog_722 | unknown function | unknown function | -1 | 34917 | 35192 |
| YP_002014404.1 | NC_011055_p83 | hypothetical protein | phrog_2747 | unknown function | unknown function | 1 | 51091 | 51312 |
| YP_002014407.1 | NC_011055_p86 | hypothetical protein | phrog_2894 | unknown function | unknown function | 1 | 52026 | 52220 |
| YP_002014429.1 | NC_011055_p108 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 63022 | 63354 |
| YP_002014391.1 | NC_011055_p70 | hypothetical protein | phrog_2771 | unknown function | unknown function | 1 | 45875 | 46345 |
| YP_002014400.1 | NC_011055_p79 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 49072 | 49419 |
| YP_002014440.1 | NC_011055_p119 | hypothetical protein | phrog_2764 | unknown function | unknown function | 1 | 67680 | 67847 |
| YP_002014347.1 | NC_011055_p26 | hypothetical protein | phrog_346 | minor tail protein | tail | 1 | 22121 | 24517 |
| YP_002014409.1 | NC_011055_p88 | hypothetical protein | phrog_7164 | unknown function | unknown function | 1 | 53316 | 53513 |
| YP_002014433.1 | NC_011055_p112 | RecA | phrog_97 | UvsX-like recombinase | other | 1 | 64987 | 65949 |
| YP_002014396.1 | NC_011055_p75 | HNHc | phrog_289 | GTP-binding domain | other | 1 | 47490 | 47903 |
| YP_002014334.1 | NC_011055_p13 | hypothetical protein | phrog_442 | head-tail adaptor | connector | 1 | 8458 | 9024 |
| YP_002014435.1 | NC_011055_p114 | hypothetical protein | phrog_2755 | unknown function | unknown function | 1 | 66070 | 66243 |
| YP_002014384.1 | NC_011055_p63 | hypothetical protein | phrog_2147 | unknown function | unknown function | 1 | 42540 | 42773 |
| YP_002014329.1 | NC_011055_p8 | hypothetical protein | phrog_2845 | unknown function | unknown function | 1 | 3516 | 3737 |
| YP_002014373.1 | NC_011055_p52 | hypothetical protein | phrog_2842 | unknown function | unknown function | 1 | 38318 | 38557 |
| YP_002014365.1 | NC_011055_p44 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35189 | 35386 |
| YP_002014395.1 | NC_011055_p74 | hypothetical protein | phrog_2793 | unknown function | unknown function | 1 | 47260 | 47493 |
| YP_002014343.1 | NC_011055_p22 | tape measure protein | phrog_2723 | tail length tape measure protein | tail | 1 | 13168 | 17904 |
| YP_002014341.1 | NC_011055_p20 | hypothetical protein | phrog_5940 | tail assembly chaperone | tail | 1 | 12381 | 12662 |
| YP_002014421.1 | NC_011055_p100 | Clp protease | phrog_94 | head maturation protease | head and packaging | 1 | 59477 | 60256 |
| YP_002014361.1 | NC_011055_p40 | hypothetical protein | phrog_21527 | unknown function | unknown function | -1 | 34188 | 34319 |
| YP_002014362.1 | NC_011055_p41 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 34340 | 34516 |
| YP_002014323.1 | NC_011055_p2 | hypothetical protein | phrog_2829 | unknown function | unknown function | 1 | 446 | 604 |
| YP_002014393.1 | NC_011055_p72 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 46716 | 47084 |
| YP_002014401.1 | NC_011055_p80 | DnaB | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 49412 | 50674 |
| YP_002014461.1 | NC_011055_p140 | hypothetical protein | phrog_1438 | unknown function | unknown function | -1 | 73942 | 74115 |
| YP_002014394.1 | NC_011055_p73 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 47084 | 47257 |
| YP_002014339.1 | NC_011055_p18 | hypothetical protein | phrog_5711 | head fiber protein | head and packaging | 1 | 11194 | 11667 |
| YP_002014380.1 | NC_011055_p59 | hypothetical protein | phrog_2800 | unknown function | unknown function | 1 | 41279 | 41557 |
| YP_002014418.1 | NC_011055_p97 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 57165 | 57671 |
| YP_002014417.1 | NC_011055_p96 | hypothetical protein | phrog_2788 | unknown function | unknown function | 1 | 56797 | 57132 |
| YP_002014370.1 | NC_011055_p49 | hypothetical protein | singleton | unknown function | unknown function | -1 | 36745 | 36933 |
| YP_002014360.1 | NC_011055_p39 | hypothetical protein | phrog_4396 | unknown function | unknown function | -1 | 34015 | 34143 |
| YP_002014406.1 | NC_011055_p85 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 51667 | 52029 |
| YP_002014346.1 | NC_011055_p25 | hypothetical protein | phrog_732 | minor tail protein | tail | 1 | 21271 | 22104 |
| YP_002014451.1 | NC_011055_p130 | hypothetical protein | phrog_13319 | unknown function | unknown function | -1 | 70231 | 70683 |
| YP_002014430.1 | NC_011055_p109 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 63351 | 63944 |
| YP_002014330.1 | NC_011055_p9 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 3721 | 5280 |
| YP_002014403.1 | NC_011055_p82 | hypothetical protein | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 50841 | 51116 |
| YP_002014399.1 | NC_011055_p78 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 48440 | 49090 |
| YP_002014423.1 | NC_011055_p102 | hypothetical protein | phrog_2757 | unknown function | unknown function | 1 | 60610 | 60900 |
| YP_002014456.1 | NC_011055_p135 | hypothetical protein | phrog_3730 | unknown function | unknown function | -1 | 72265 | 72390 |
| YP_002014428.1 | NC_011055_p107 | HNH endonuclease | phrog_1492 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 62562 | 63008 |
| YP_002014463.1 | NC_011055_p142 | hypothetical protein | phrog_2795 | unknown function | unknown function | -1 | 74352 | 74555 |
| YP_002014452.1 | NC_011055_p131 | hypothetical protein | phrog_1915 | unknown function | unknown function | -1 | 70680 | 71114 |
| YP_002014455.1 | NC_011055_p134 | hypothetical protein | phrog_4547 | unknown function | unknown function | -1 | 71942 | 72259 |
| YP_002014332.1 | NC_011055_p11 | capsid protein | phrog_10 | major head protein | head and packaging | 1 | 6663 | 8156 |
| YP_002014350.1 | NC_011055_p29 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 28387 | 28815 |
| YP_002014432.1 | NC_011055_p111 | hypothetical protein | phrog_1941 | unknown function | unknown function | 1 | 64737 | 64979 |
| YP_002014431.1 | NC_011055_p110 | pol III epsilon | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 63955 | 64740 |
| YP_002014368.1 | NC_011055_p47 | hypothetical protein | phrog_2815 | unknown function | unknown function | -1 | 35918 | 36064 |
| YP_002014378.1 | NC_011055_p57 | hypothetical protein | phrog_923 | unknown function | unknown function | 1 | 40289 | 41134 |
| YP_002014325.1 | NC_011055_p4 | hypothetical protein | phrog_3858 | unknown function | unknown function | 1 | 783 | 935 |
| YP_002014465.1 | NC_011055_p144 | hypothetical protein | phrog_2904 | unknown function | unknown function | 1 | 74788 | 75147 |
| YP_002014327.1 | NC_011055_p6 | hypothetical protein | phrog_2202 | unknown function | unknown function | -1 | 1475 | 1798 |
| YP_002014449.1 | NC_011055_p128 | hypothetical protein | phrog_2942 | unknown function | unknown function | -1 | 69765 | 70019 |
| YP_002014337.1 | NC_011055_p16 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 9729 | 10133 |
| YP_002014446.1 | NC_011055_p125 | hypothetical protein | phrog_6448 | unknown function | unknown function | 1 | 68619 | 68732 |
| YP_002014445.1 | NC_011055_p124 | hypothetical protein | phrog_3016 | unknown function | unknown function | 1 | 68456 | 68617 |
| YP_002014340.1 | NC_011055_p19 | hypothetical protein | phrog_621 | tail assembly chaperone | tail | 1 | 11788 | 12249 |
| YP_002014388.1 | NC_011055_p67 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 44446 | 44856 |
| YP_002014322.1 | NC_011055_p1 | hypothetical protein | phrog_4110 | unknown function | unknown function | 1 | 267 | 449 |
| YP_002014416.1 | NC_011055_p95 | hypothetical protein | phrog_7833 | unknown function | unknown function | 1 | 56673 | 56795 |
| YP_002014425.1 | NC_011055_p104 | HNH endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 61269 | 61559 |
| YP_002014354.1 | NC_011055_p33 | holin | phrog_526 | holin | lysis | 1 | 30984 | 31367 |
| YP_002014426.1 | NC_011055_p105 | hypothetical protein | phrog_2846 | unknown function | unknown function | 1 | 62013 | 62237 |
| YP_002014447.1 | NC_011055_p126 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 68997 | 69260 |
| YP_002014331.1 | NC_011055_p10 | hypothetical protein | phrog_2753 | head maturation protease | head and packaging | 1 | 5283 | 6575 |
| YP_002014454.1 | NC_011055_p133 | hypothetical protein | phrog_1587 | unknown function | unknown function | -1 | 71611 | 71958 |
| YP_002014427.1 | NC_011055_p106 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 62234 | 62497 |
| YP_002014324.1 | NC_011055_p3 | hypothetical protein | phrog_2775 | unknown function | unknown function | 1 | 601 | 786 |
| YP_002014335.1 | NC_011055_p14 | hypothetical protein | phrog_1531 | head closure | connector | 1 | 9039 | 9374 |
| YP_002014462.1 | NC_011055_p141 | hypothetical protein | phrog_2772 | unknown function | unknown function | -1 | 74119 | 74346 |
| YP_002014410.1 | NC_011055_p89 | hypothetical protein | phrog_2844 | unknown function | unknown function | 1 | 53510 | 53608 |
| YP_002014397.1 | NC_011055_p76 | hypothetical protein | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 47900 | 48217 |
| YP_002014438.1 | NC_011055_p117 | hypothetical protein | phrog_2279 | unknown function | unknown function | 1 | 66802 | 67038 |
| YP_002014413.1 | NC_011055_p92 | WhiB/HNH endo | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 55785 | 56045 |
| YP_002014338.1 | NC_011055_p17 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 10160 | 11134 |
| YP_002014415.1 | NC_011055_p94 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 56217 | 56669 |
| YP_002014448.1 | NC_011055_p127 | hypothetical protein | phrog_2579 | ParB C-terminal domain | DNA, RNA and nucleotide metabolism | -1 | 69257 | 69646 |
| YP_002014387.1 | NC_011055_p66 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 43481 | 44449 |
| YP_002014385.1 | NC_011055_p64 | hypothetical protein | phrog_2221 | unknown function | unknown function | 1 | 42773 | 42934 |
| YP_002014434.1 | NC_011055_p113 | hypothetical protein | phrog_2965 | unknown function | unknown function | 1 | 65946 | 66083 |
| YP_002014405.1 | NC_011055_p84 | hypothetical protein | phrog_3836 | unknown function | unknown function | 1 | 51305 | 51670 |
| YP_002014344.1 | NC_011055_p23 | hypothetical protein | phrog_106 | minor tail protein | tail | 1 | 17934 | 19595 |
| YP_002014376.1 | NC_011055_p55 | hypothetical protein | phrog_3071 | unknown function | unknown function | 1 | 40060 | 40158 |
| YP_002014381.1 | NC_011055_p60 | hypothetical protein | phrog_4633 | unknown function | unknown function | 1 | 41866 | 42054 |
| YP_002014342.1 | NC_011055_p21 | endo VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 12697 | 13167 |
| YP_002014326.1 | NC_011055_p5 | terminase small subunit | phrog_83 | terminase small subunit | head and packaging | 1 | 997 | 1389 |
| YP_002014466.1 | NC_011055_p145 | hypothetical protein | phrog_8080 | unknown function | unknown function | -1 | 75194 | 75412 |
| YP_002014450.1 | NC_011055_p129 | hypothetical protein | phrog_9808 | unknown function | unknown function | -1 | 70016 | 70234 |
| YP_002014352.1 | NC_011055_p31 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 29120 | 29404 |
| YP_002014441.1 | NC_011055_p120 | hypothetical protein | phrog_2823 | unknown function | unknown function | 1 | 67831 | 68031 |
| YP_002014437.1 | NC_011055_p116 | hypothetical protein | phrog_23135 | unknown function | unknown function | 1 | 66570 | 66842 |
| YP_002014392.1 | NC_011055_p71 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 46345 | 46713 |
| YP_002014371.1 | NC_011055_p50 | hypothetical protein | phrog_38765 | unknown function | unknown function | 1 | 36926 | 37093 |
| YP_002014357.1 | NC_011055_p36 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 32549 | 32965 |
| YP_002014458.1 | NC_011055_p137 | hypothetical protein | phrog_2883 | unknown function | unknown function | -1 | 72632 | 73144 |
| YP_002014390.1 | NC_011055_p69 | hypothetical protein | phrog_2750 | unknown function | unknown function | 1 | 45564 | 45875 |
| YP_002014351.1 | NC_011055_p30 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 28802 | 28987 |
| YP_002014424.1 | NC_011055_p103 | hypothetical protein | phrog_1969 | unknown function | unknown function | 1 | 60905 | 61216 |
| YP_002014386.1 | NC_011055_p65 | hypothetical protein | phrog_762 | unknown function | unknown function | 1 | 42981 | 43484 |
| YP_002014375.1 | NC_011055_p54 | hypothetical protein | phrog_2745 | transcriptional repressor | transcription regulation | -1 | 39403 | 39843 |
| YP_002014389.1 | NC_011055_p68 | hypothetical protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 44849 | 45571 |
| YP_002014412.1 | NC_011055_p91 | hypothetical protein | phrog_1590 | unknown function | unknown function | 1 | 54967 | 55788 |
| YP_002014443.1 | NC_011055_p122 | hypothetical protein | phrog_2925 | unknown function | unknown function | 1 | 68162 | 68341 |
| YP_002014464.1 | NC_011055_p143 | hypothetical protein | phrog_8479 | unknown function | unknown function | -1 | 74559 | 74723 |
| YP_002014420.1 | NC_011055_p99 | ssb | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 58920 | 59360 |