Genomic map of Mycobacterium phage Phaedrus (NC_011057)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_011057
Definition
Mycobacterium phage Phaedrus, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Pipefishvirus; unclassified Pipefishvirus.
DB of origin
REFSEQ
Length
68090
Host Name
Mycobacterium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
98
%GC
67.56
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_002014702.1 NC_011057_p91 hypothetical protein phrog_1010 unknown function unknown function -1 64703 65191
YP_002014644.1 NC_011057_p33 hypothetical protein phrog_948 unknown function unknown function 1 33763 34188
YP_002014705.1 NC_011057_p94 hypothetical protein phrog_4825 unknown function unknown function 1 66865 67038
YP_002014651.1 NC_011057_p40 hypothetical protein phrog_2804 virion structural protein head and packaging 1 37933 38658
YP_002014614.1 NC_011057_p3 PAPS reductase phrog_2302 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover 1 958 2040
YP_002014678.1 NC_011057_p67 hypothetical protein phrog_1031 unknown function unknown function 1 57955 58359
YP_002014639.1 NC_011057_p28 hypothetical protein phrog_837 minor tail protein tail 1 27492 28535
YP_002014653.1 NC_011057_p42 hypothetical protein phrog_955 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 38947 39384
YP_002014625.1 NC_011057_p14 hypothetical protein phrog_779 unknown function unknown function 1 13057 13866
YP_002014642.1 NC_011057_p31 hypothetical protein phrog_416 minor tail protein tail 1 32138 33340
YP_002014657.1 NC_011057_p46 hypothetical protein phrog_870 unknown function unknown function -1 42590 43135
YP_002014704.1 NC_011057_p93 hypothetical protein phrog_2972 unknown function unknown function -1 66451 66687
YP_002014649.1 NC_011057_p38 hypothetical protein phrog_941 unknown function unknown function 1 37182 37505
YP_002014698.1 NC_011057_p87 hypothetical protein phrog_6428 unknown function unknown function -1 63370 63582
YP_002014655.1 NC_011057_p44 LysA phrog_700 endolysin lysis 1 40388 41455
YP_002014666.1 NC_011057_p55 hypothetical protein phrog_6482 unknown function unknown function -1 53117 53392
YP_002014689.1 NC_011057_p78 hypothetical protein phrog_6460 unknown function unknown function -1 60941 61111
YP_002014648.1 NC_011057_p37 hypothetical protein phrog_915 unknown function unknown function 1 36817 37185
YP_002014626.1 NC_011057_p15 hypothetical protein phrog_970 unknown function unknown function 1 13882 14487
YP_002014629.1 NC_011057_p18 hypothetical protein phrog_2344 unknown function unknown function 1 15379 15858
YP_002014709.1 NC_011057_p98 hypothetical protein phrog_5930 unknown function unknown function 1 67739 68041
YP_002014647.1 NC_011057_p36 hypothetical protein phrog_3329 unknown function unknown function 1 35445 36794
YP_002014617.1 NC_011057_p6 hypothetical protein phrog_6317 unknown function unknown function -1 4504 4755
YP_002014703.1 NC_011057_p92 hypothetical protein phrog_1221 unknown function unknown function -1 65265 66323
YP_002014664.1 NC_011057_p53 hypothetical protein phrog_6342 unknown function unknown function -1 50563 51303
YP_002014660.1 NC_011057_p49 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 45383 47080
YP_002014634.1 NC_011057_p23 hypothetical protein phrog_901 unknown function unknown function 1 18924 19295
YP_002014662.1 NC_011057_p51 hypothetical protein phrog_3892 unknown function unknown function -1 47537 47884
YP_002014640.1 NC_011057_p29 hypothetical protein phrog_746 minor tail protein tail 1 28532 30757
YP_002014650.1 NC_011057_p39 hypothetical protein phrog_892 tail fiber protein tail 1 37523 37933
YP_002014681.1 NC_011057_p70 hypothetical protein phrog_6511 unknown function unknown function 1 58822 58974
YP_002014619.1 NC_011057_p8 hypothetical protein phrog_6276 unknown function unknown function -1 5465 5761
YP_002014697.1 NC_011057_p86 hypothetical protein phrog_6199 unknown function unknown function -1 62946 63305
YP_002014632.1 NC_011057_p21 hypothetical protein phrog_783 head-tail adaptor connector 1 17655 18395
YP_002014631.1 NC_011057_p20 hypothetical protein phrog_792 major tail protein tail 1 16275 17354
YP_002014667.1 NC_011057_p56 excise phrog_6936 unknown function unknown function -1 53389 53526
YP_002014692.1 NC_011057_p81 hypothetical protein phrog_7541 unknown function unknown function -1 61612 61944
YP_002014665.1 NC_011057_p54 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 51300 53117
YP_002014676.1 NC_011057_p65 hypothetical protein phrog_4938 unknown function unknown function 1 57190 57354
YP_002014615.1 NC_011057_p4 hypothetical protein phrog_2159 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 2037 2606
YP_002014690.1 NC_011057_p79 hypothetical protein phrog_6338 unknown function unknown function -1 61108 61266
YP_002014613.1 NC_011057_p2 hypothetical protein phrog_6307 unknown function unknown function 1 737 961
YP_002014669.1 NC_011057_p58 hypothetical protein phrog_993 unknown function unknown function -1 53966 54577
YP_002014707.1 NC_011057_p96 hypothetical protein phrog_6097 unknown function unknown function 1 67292 67528
YP_002014635.1 NC_011057_p24 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 19399 19692
YP_002014680.1 NC_011057_p69 hypothetical protein phrog_1306 unknown function unknown function -1 58633 58767
YP_002014700.1 NC_011057_p89 hypothetical protein phrog_6114 unknown function unknown function -1 63962 64141
YP_002014658.1 NC_011057_p47 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism -1 43184 44797
YP_002014687.1 NC_011057_p76 hypothetical protein phrog_4461 unknown function unknown function -1 60685 60783
YP_002014673.1 NC_011057_p62 hypothetical protein phrog_996 unknown function unknown function 1 55915 56682
YP_002014685.1 NC_011057_p74 hypothetical protein phrog_6691 unknown function unknown function -1 60085 60297
YP_002014706.1 NC_011057_p95 hypothetical protein phrog_5733 unknown function unknown function 1 67050 67295
YP_002014659.1 NC_011057_p48 hypothetical protein phrog_36161 unknown function unknown function -1 44797 45243
YP_002014708.1 NC_011057_p97 hypothetical protein phrog_6432 unknown function unknown function 1 67519 67674
YP_002014661.1 NC_011057_p50 hypothetical protein phrog_6400 unknown function unknown function -1 47175 47537
YP_002014654.1 NC_011057_p43 hypothetical protein phrog_636 unknown function unknown function -1 39429 40373
YP_002014637.1 NC_011057_p26 tape measure protein phrog_934 tail length tape measure protein tail 1 20311 26055
YP_002014674.1 NC_011057_p63 hypothetical protein phrog_1016 unknown function unknown function 1 56718 56966
YP_002014696.1 NC_011057_p85 hypothetical protein phrog_5355 unknown function unknown function -1 62716 62871
YP_002014679.1 NC_011057_p68 hypothetical protein phrog_4885 unknown function unknown function 1 58363 58620
YP_002014671.1 NC_011057_p60 hypothetical protein phrog_6105 unknown function unknown function -1 54825 55175
YP_002014616.1 NC_011057_p5 terminase large subunit phrog_38 terminase large subunit head and packaging 1 2603 4363
YP_002014699.1 NC_011057_p88 hypothetical protein phrog_5411 HNH endonuclease DNA, RNA and nucleotide metabolism -1 63582 63962
YP_002014670.1 NC_011057_p59 hypothetical protein phrog_6656 unknown function unknown function -1 54598 54828
YP_002014693.1 NC_011057_p82 hypothetical protein phrog_7414 unknown function unknown function -1 61941 62228
YP_002014641.1 NC_011057_p30 hypothetical protein phrog_356 minor tail protein tail 1 30759 32141
YP_002014627.1 NC_011057_p16 hypothetical protein phrog_565 holin lysis 1 14604 14918
YP_002014682.1 NC_011057_p71 hypothetical protein phrog_6229 unknown function unknown function 1 58985 59320
YP_002014638.1 NC_011057_p27 hypothetical protein phrog_838 unknown function unknown function 1 26065 27495
YP_002014652.1 NC_011057_p41 hypothetical protein phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 38714 38950
YP_002014622.1 NC_011057_p11 hypothetical protein phrog_859 portal protein head and packaging 1 8125 10557
YP_002014691.1 NC_011057_p80 hypothetical protein phrog_4392 unknown function unknown function -1 61259 61612
YP_002014620.1 NC_011057_p9 hypothetical protein phrog_781 unknown function unknown function 1 5866 6201
YP_002014630.1 NC_011057_p19 hypothetical protein phrog_2525 unknown function unknown function 1 15855 16187
YP_002014623.1 NC_011057_p12 hypothetical protein phrog_2069 unknown function unknown function 1 10557 10763
YP_002014701.1 NC_011057_p90 hypothetical protein phrog_6469 unknown function unknown function -1 64138 64560
YP_002014621.1 NC_011057_p10 hypothetical protein phrog_776 portal protein head and packaging 1 6231 8135
YP_002014612.1 NC_011057_p1 hypothetical protein phrog_723 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 73 693
YP_002014686.1 NC_011057_p75 WhiB/HNH endo phrog_960 HNH endonuclease DNA, RNA and nucleotide metabolism -1 60363 60692
YP_002014663.1 NC_011057_p52 helicase phrog_906 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 47923 50529
YP_002014628.1 NC_011057_p17 hypothetical protein phrog_2272 unknown function unknown function 1 14921 15382
YP_002014645.1 NC_011057_p34 hypothetical protein phrog_282 unknown function unknown function 1 34199 34852
YP_002014646.1 NC_011057_p35 hypothetical protein phrog_282 unknown function unknown function 1 34849 35448
YP_002014618.1 NC_011057_p7 RuvC phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 4752 5222
YP_002014695.1 NC_011057_p84 hypothetical protein phrog_2089 unknown function unknown function -1 62507 62701
YP_002014624.1 NC_011057_p13 hypothetical protein phrog_777 major head protein head and packaging 1 10943 12958
YP_002014672.1 NC_011057_p61 hypothetical protein phrog_982 unknown function unknown function -1 55252 55521
YP_002014675.1 NC_011057_p64 hypothetical protein phrog_6404 unknown function unknown function 1 56963 57193
YP_002014643.1 NC_011057_p32 hypothetical protein phrog_240 head protein head and packaging 1 33371 33754
YP_002014633.1 NC_011057_p22 hypothetical protein phrog_810 unknown function unknown function 1 18392 18913
YP_002014688.1 NC_011057_p77 hypothetical protein phrog_6304 unknown function unknown function -1 60780 60944
YP_002014656.1 NC_011057_p45 LysB phrog_102 endolysin lysis 1 41456 42520
YP_002014694.1 NC_011057_p83 hypothetical protein phrog_7490 unknown function unknown function -1 62225 62413
YP_002014677.1 NC_011057_p66 hypothetical protein phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 57351 57950
YP_002014684.1 NC_011057_p73 hypothetical protein phrog_4974 unknown function unknown function -1 59842 60030
YP_002014668.1 NC_011057_p57 hypothetical protein phrog_3025 unknown function unknown function -1 53523 53969
YP_002014636.1 NC_011057_p25 hypothetical protein phrog_1118 tail assembly chaperone tail 1 19692 20285
YP_002014683.1 NC_011057_p72 hypothetical protein phrog_928 unknown function unknown function 1 59302 59829