| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_011057 |
Definition |
Mycobacterium phage Phaedrus, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Pipefishvirus; unclassified Pipefishvirus. |
DB of origin |
REFSEQ |
Length |
68090 |
Host Name |
Mycobacterium |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
98 |
%GC |
67.56 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_002014702.1 | NC_011057_p91 | hypothetical protein | phrog_1010 | unknown function | unknown function | -1 | 64703 | 65191 |
| YP_002014644.1 | NC_011057_p33 | hypothetical protein | phrog_948 | unknown function | unknown function | 1 | 33763 | 34188 |
| YP_002014705.1 | NC_011057_p94 | hypothetical protein | phrog_4825 | unknown function | unknown function | 1 | 66865 | 67038 |
| YP_002014651.1 | NC_011057_p40 | hypothetical protein | phrog_2804 | virion structural protein | head and packaging | 1 | 37933 | 38658 |
| YP_002014614.1 | NC_011057_p3 | PAPS reductase | phrog_2302 | phosphoadenosine phosphosulfate reductase | moron, auxiliary metabolic gene and host takeover | 1 | 958 | 2040 |
| YP_002014678.1 | NC_011057_p67 | hypothetical protein | phrog_1031 | unknown function | unknown function | 1 | 57955 | 58359 |
| YP_002014639.1 | NC_011057_p28 | hypothetical protein | phrog_837 | minor tail protein | tail | 1 | 27492 | 28535 |
| YP_002014653.1 | NC_011057_p42 | hypothetical protein | phrog_955 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 38947 | 39384 |
| YP_002014625.1 | NC_011057_p14 | hypothetical protein | phrog_779 | unknown function | unknown function | 1 | 13057 | 13866 |
| YP_002014642.1 | NC_011057_p31 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 32138 | 33340 |
| YP_002014657.1 | NC_011057_p46 | hypothetical protein | phrog_870 | unknown function | unknown function | -1 | 42590 | 43135 |
| YP_002014704.1 | NC_011057_p93 | hypothetical protein | phrog_2972 | unknown function | unknown function | -1 | 66451 | 66687 |
| YP_002014649.1 | NC_011057_p38 | hypothetical protein | phrog_941 | unknown function | unknown function | 1 | 37182 | 37505 |
| YP_002014698.1 | NC_011057_p87 | hypothetical protein | phrog_6428 | unknown function | unknown function | -1 | 63370 | 63582 |
| YP_002014655.1 | NC_011057_p44 | LysA | phrog_700 | endolysin | lysis | 1 | 40388 | 41455 |
| YP_002014666.1 | NC_011057_p55 | hypothetical protein | phrog_6482 | unknown function | unknown function | -1 | 53117 | 53392 |
| YP_002014689.1 | NC_011057_p78 | hypothetical protein | phrog_6460 | unknown function | unknown function | -1 | 60941 | 61111 |
| YP_002014648.1 | NC_011057_p37 | hypothetical protein | phrog_915 | unknown function | unknown function | 1 | 36817 | 37185 |
| YP_002014626.1 | NC_011057_p15 | hypothetical protein | phrog_970 | unknown function | unknown function | 1 | 13882 | 14487 |
| YP_002014629.1 | NC_011057_p18 | hypothetical protein | phrog_2344 | unknown function | unknown function | 1 | 15379 | 15858 |
| YP_002014709.1 | NC_011057_p98 | hypothetical protein | phrog_5930 | unknown function | unknown function | 1 | 67739 | 68041 |
| YP_002014647.1 | NC_011057_p36 | hypothetical protein | phrog_3329 | unknown function | unknown function | 1 | 35445 | 36794 |
| YP_002014617.1 | NC_011057_p6 | hypothetical protein | phrog_6317 | unknown function | unknown function | -1 | 4504 | 4755 |
| YP_002014703.1 | NC_011057_p92 | hypothetical protein | phrog_1221 | unknown function | unknown function | -1 | 65265 | 66323 |
| YP_002014664.1 | NC_011057_p53 | hypothetical protein | phrog_6342 | unknown function | unknown function | -1 | 50563 | 51303 |
| YP_002014660.1 | NC_011057_p49 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 45383 | 47080 |
| YP_002014634.1 | NC_011057_p23 | hypothetical protein | phrog_901 | unknown function | unknown function | 1 | 18924 | 19295 |
| YP_002014662.1 | NC_011057_p51 | hypothetical protein | phrog_3892 | unknown function | unknown function | -1 | 47537 | 47884 |
| YP_002014640.1 | NC_011057_p29 | hypothetical protein | phrog_746 | minor tail protein | tail | 1 | 28532 | 30757 |
| YP_002014650.1 | NC_011057_p39 | hypothetical protein | phrog_892 | tail fiber protein | tail | 1 | 37523 | 37933 |
| YP_002014681.1 | NC_011057_p70 | hypothetical protein | phrog_6511 | unknown function | unknown function | 1 | 58822 | 58974 |
| YP_002014619.1 | NC_011057_p8 | hypothetical protein | phrog_6276 | unknown function | unknown function | -1 | 5465 | 5761 |
| YP_002014697.1 | NC_011057_p86 | hypothetical protein | phrog_6199 | unknown function | unknown function | -1 | 62946 | 63305 |
| YP_002014632.1 | NC_011057_p21 | hypothetical protein | phrog_783 | head-tail adaptor | connector | 1 | 17655 | 18395 |
| YP_002014631.1 | NC_011057_p20 | hypothetical protein | phrog_792 | major tail protein | tail | 1 | 16275 | 17354 |
| YP_002014667.1 | NC_011057_p56 | excise | phrog_6936 | unknown function | unknown function | -1 | 53389 | 53526 |
| YP_002014692.1 | NC_011057_p81 | hypothetical protein | phrog_7541 | unknown function | unknown function | -1 | 61612 | 61944 |
| YP_002014665.1 | NC_011057_p54 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 51300 | 53117 |
| YP_002014676.1 | NC_011057_p65 | hypothetical protein | phrog_4938 | unknown function | unknown function | 1 | 57190 | 57354 |
| YP_002014615.1 | NC_011057_p4 | hypothetical protein | phrog_2159 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 2037 | 2606 |
| YP_002014690.1 | NC_011057_p79 | hypothetical protein | phrog_6338 | unknown function | unknown function | -1 | 61108 | 61266 |
| YP_002014613.1 | NC_011057_p2 | hypothetical protein | phrog_6307 | unknown function | unknown function | 1 | 737 | 961 |
| YP_002014669.1 | NC_011057_p58 | hypothetical protein | phrog_993 | unknown function | unknown function | -1 | 53966 | 54577 |
| YP_002014707.1 | NC_011057_p96 | hypothetical protein | phrog_6097 | unknown function | unknown function | 1 | 67292 | 67528 |
| YP_002014635.1 | NC_011057_p24 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 19399 | 19692 |
| YP_002014680.1 | NC_011057_p69 | hypothetical protein | phrog_1306 | unknown function | unknown function | -1 | 58633 | 58767 |
| YP_002014700.1 | NC_011057_p89 | hypothetical protein | phrog_6114 | unknown function | unknown function | -1 | 63962 | 64141 |
| YP_002014658.1 | NC_011057_p47 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43184 | 44797 |
| YP_002014687.1 | NC_011057_p76 | hypothetical protein | phrog_4461 | unknown function | unknown function | -1 | 60685 | 60783 |
| YP_002014673.1 | NC_011057_p62 | hypothetical protein | phrog_996 | unknown function | unknown function | 1 | 55915 | 56682 |
| YP_002014685.1 | NC_011057_p74 | hypothetical protein | phrog_6691 | unknown function | unknown function | -1 | 60085 | 60297 |
| YP_002014706.1 | NC_011057_p95 | hypothetical protein | phrog_5733 | unknown function | unknown function | 1 | 67050 | 67295 |
| YP_002014659.1 | NC_011057_p48 | hypothetical protein | phrog_36161 | unknown function | unknown function | -1 | 44797 | 45243 |
| YP_002014708.1 | NC_011057_p97 | hypothetical protein | phrog_6432 | unknown function | unknown function | 1 | 67519 | 67674 |
| YP_002014661.1 | NC_011057_p50 | hypothetical protein | phrog_6400 | unknown function | unknown function | -1 | 47175 | 47537 |
| YP_002014654.1 | NC_011057_p43 | hypothetical protein | phrog_636 | unknown function | unknown function | -1 | 39429 | 40373 |
| YP_002014637.1 | NC_011057_p26 | tape measure protein | phrog_934 | tail length tape measure protein | tail | 1 | 20311 | 26055 |
| YP_002014674.1 | NC_011057_p63 | hypothetical protein | phrog_1016 | unknown function | unknown function | 1 | 56718 | 56966 |
| YP_002014696.1 | NC_011057_p85 | hypothetical protein | phrog_5355 | unknown function | unknown function | -1 | 62716 | 62871 |
| YP_002014679.1 | NC_011057_p68 | hypothetical protein | phrog_4885 | unknown function | unknown function | 1 | 58363 | 58620 |
| YP_002014671.1 | NC_011057_p60 | hypothetical protein | phrog_6105 | unknown function | unknown function | -1 | 54825 | 55175 |
| YP_002014616.1 | NC_011057_p5 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 2603 | 4363 |
| YP_002014699.1 | NC_011057_p88 | hypothetical protein | phrog_5411 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 63582 | 63962 |
| YP_002014670.1 | NC_011057_p59 | hypothetical protein | phrog_6656 | unknown function | unknown function | -1 | 54598 | 54828 |
| YP_002014693.1 | NC_011057_p82 | hypothetical protein | phrog_7414 | unknown function | unknown function | -1 | 61941 | 62228 |
| YP_002014641.1 | NC_011057_p30 | hypothetical protein | phrog_356 | minor tail protein | tail | 1 | 30759 | 32141 |
| YP_002014627.1 | NC_011057_p16 | hypothetical protein | phrog_565 | holin | lysis | 1 | 14604 | 14918 |
| YP_002014682.1 | NC_011057_p71 | hypothetical protein | phrog_6229 | unknown function | unknown function | 1 | 58985 | 59320 |
| YP_002014638.1 | NC_011057_p27 | hypothetical protein | phrog_838 | unknown function | unknown function | 1 | 26065 | 27495 |
| YP_002014652.1 | NC_011057_p41 | hypothetical protein | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 38714 | 38950 |
| YP_002014622.1 | NC_011057_p11 | hypothetical protein | phrog_859 | portal protein | head and packaging | 1 | 8125 | 10557 |
| YP_002014691.1 | NC_011057_p80 | hypothetical protein | phrog_4392 | unknown function | unknown function | -1 | 61259 | 61612 |
| YP_002014620.1 | NC_011057_p9 | hypothetical protein | phrog_781 | unknown function | unknown function | 1 | 5866 | 6201 |
| YP_002014630.1 | NC_011057_p19 | hypothetical protein | phrog_2525 | unknown function | unknown function | 1 | 15855 | 16187 |
| YP_002014623.1 | NC_011057_p12 | hypothetical protein | phrog_2069 | unknown function | unknown function | 1 | 10557 | 10763 |
| YP_002014701.1 | NC_011057_p90 | hypothetical protein | phrog_6469 | unknown function | unknown function | -1 | 64138 | 64560 |
| YP_002014621.1 | NC_011057_p10 | hypothetical protein | phrog_776 | portal protein | head and packaging | 1 | 6231 | 8135 |
| YP_002014612.1 | NC_011057_p1 | hypothetical protein | phrog_723 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 73 | 693 |
| YP_002014686.1 | NC_011057_p75 | WhiB/HNH endo | phrog_960 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 60363 | 60692 |
| YP_002014663.1 | NC_011057_p52 | helicase | phrog_906 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | -1 | 47923 | 50529 |
| YP_002014628.1 | NC_011057_p17 | hypothetical protein | phrog_2272 | unknown function | unknown function | 1 | 14921 | 15382 |
| YP_002014645.1 | NC_011057_p34 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 34199 | 34852 |
| YP_002014646.1 | NC_011057_p35 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 34849 | 35448 |
| YP_002014618.1 | NC_011057_p7 | RuvC | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 4752 | 5222 |
| YP_002014695.1 | NC_011057_p84 | hypothetical protein | phrog_2089 | unknown function | unknown function | -1 | 62507 | 62701 |
| YP_002014624.1 | NC_011057_p13 | hypothetical protein | phrog_777 | major head protein | head and packaging | 1 | 10943 | 12958 |
| YP_002014672.1 | NC_011057_p61 | hypothetical protein | phrog_982 | unknown function | unknown function | -1 | 55252 | 55521 |
| YP_002014675.1 | NC_011057_p64 | hypothetical protein | phrog_6404 | unknown function | unknown function | 1 | 56963 | 57193 |
| YP_002014643.1 | NC_011057_p32 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 33371 | 33754 |
| YP_002014633.1 | NC_011057_p22 | hypothetical protein | phrog_810 | unknown function | unknown function | 1 | 18392 | 18913 |
| YP_002014688.1 | NC_011057_p77 | hypothetical protein | phrog_6304 | unknown function | unknown function | -1 | 60780 | 60944 |
| YP_002014656.1 | NC_011057_p45 | LysB | phrog_102 | endolysin | lysis | 1 | 41456 | 42520 |
| YP_002014694.1 | NC_011057_p83 | hypothetical protein | phrog_7490 | unknown function | unknown function | -1 | 62225 | 62413 |
| YP_002014677.1 | NC_011057_p66 | hypothetical protein | phrog_645 | Rnase E | DNA, RNA and nucleotide metabolism | 1 | 57351 | 57950 |
| YP_002014684.1 | NC_011057_p73 | hypothetical protein | phrog_4974 | unknown function | unknown function | -1 | 59842 | 60030 |
| YP_002014668.1 | NC_011057_p57 | hypothetical protein | phrog_3025 | unknown function | unknown function | -1 | 53523 | 53969 |
| YP_002014636.1 | NC_011057_p25 | hypothetical protein | phrog_1118 | tail assembly chaperone | tail | 1 | 19692 | 20285 |
| YP_002014683.1 | NC_011057_p72 | hypothetical protein | phrog_928 | unknown function | unknown function | 1 | 59302 | 59829 |