Genomic map of Pseudomonas phage PT2 (NC_011107)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_011107
Definition
Pseudomonas phage PT2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Krylovirinae; Phikmvvirus; Pseudomonas virus PT2.
DB of origin
REFSEQ
Length
42961
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
62.18
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_002117817.1 NC_011107_p38 capsid protein phrog_267 major head protein head and packaging 1 24543 25550
YP_002117818.1 NC_011107_p39 tail tubular protein A phrog_446 tail protein tail 1 25647 26201
YP_002117791.1 NC_011107_p12 hypothetical protein phrog_5433 unknown function unknown function 1 5013 5432
YP_002117811.1 NC_011107_p32 hypothetical protein phrog_6575 unknown function unknown function 1 21009 21260
YP_002117812.1 NC_011107_p33 hypothetical protein phrog_3986 unknown function unknown function 1 21260 21847
YP_002117780.1 NC_011107_p1 hypothetical protein phrog_21618 unknown function unknown function 1 901 1122
YP_002117783.1 NC_011107_p4 hypothetical protein phrog_1448 unknown function unknown function 1 2258 2797
YP_002117820.1 NC_011107_p41 internal virion protein A phrog_805 internal virion protein head and packaging 1 28684 29229
YP_002117815.1 NC_011107_p36 head-tail connector protein phrog_449 head-tail adaptor connector 1 21986 23518
YP_002117829.1 NC_011107_p50 hypothetical protein phrog_6597 holin lysis 1 40711 40911
YP_002117833.1 NC_011107_p54 hypothetical protein phrog_7171 minor head protein head and packaging 1 42131 42325
YP_002117823.1 NC_011107_p44 tail fiber protein phrog_6953 tail fiber protein tail 1 35944 36699
YP_002117798.1 NC_011107_p19 hypothetical protein phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 8541 9731
YP_002117825.1 NC_011107_p46 tail fiber protein phrog_4176 tail fiber protein tail 1 37129 38007
YP_002117805.1 NC_011107_p26 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 15445 16386
YP_002117782.1 NC_011107_p3 hypothetical protein phrog_7124 unknown function unknown function 1 2020 2247
YP_002117781.1 NC_011107_p2 hypothetical protein phrog_5722 unknown function unknown function 1 1736 2020
YP_002117788.1 NC_011107_p9 hypothetical protein phrog_4342 unknown function unknown function 1 4105 4392
YP_002117789.1 NC_011107_p10 hypothetical protein phrog_4955 unknown function unknown function 1 4389 4625
YP_002117793.1 NC_011107_p14 DNA binding protein phrog_6982 DNA polymerase DNA, RNA and nucleotide metabolism 1 5863 6672
YP_002117810.1 NC_011107_p31 T3/T7-like RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 18389 20836
YP_002117816.1 NC_011107_p37 scaffolding protein phrog_1018 head scaffolding protein head and packaging 1 23522 24490
YP_002117801.1 NC_011107_p22 hypothetical protein phrog_7292 unknown function unknown function 1 11276 11611
YP_002117787.1 NC_011107_p8 hypothetical protein phrog_27649 unknown function unknown function 1 3794 4105
YP_002117822.1 NC_011107_p43 virion protein phrog_342 internal virion protein with endolysin domain head and packaging 1 31929 35942
YP_002117828.1 NC_011107_p49 DNA maturase B phrog_38 terminase large subunit head and packaging 1 38909 40714
YP_002117830.1 NC_011107_p51 hypothetical protein phrog_7 endolysin lysis 1 40908 41390
YP_002117806.1 NC_011107_p27 DNA endonuclease VII phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 16376 16816
YP_002117794.1 NC_011107_p15 hypothetical protein phrog_9409 unknown function unknown function 1 6752 7171
YP_002117799.1 NC_011107_p20 hypothetical protein phrog_1614 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 9721 10332
YP_002117813.1 NC_011107_p34 structural protein phrog_3112 virion structural protein head and packaging 1 21678 21974
YP_002117800.1 NC_011107_p21 ATP-dependent DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 10332 11279
YP_002117802.1 NC_011107_p23 exonuclease phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 11608 14031
YP_002117796.1 NC_011107_p17 hypothetical protein phrog_9768 unknown function unknown function 1 7474 7602
YP_002117821.1 NC_011107_p42 internal virion protein phrog_2083 internal virion lysozyme motif head and packaging 1 29229 31925
YP_002117804.1 NC_011107_p25 hypothetical protein phrog_862 unknown function unknown function 1 14396 15445
YP_002117786.1 NC_011107_p7 hypothetical protein phrog_7027 unknown function unknown function 1 3520 3747
YP_002117792.1 NC_011107_p13 hypothetical protein phrog_6915 unknown function unknown function 1 5501 5860
YP_002117784.1 NC_011107_p5 hypothetical protein phrog_31343 unknown function unknown function 1 2847 3086
YP_002117832.1 NC_011107_p53 hypothetical protein phrog_6908 minor head protein head and packaging 1 41767 42081
YP_002117819.1 NC_011107_p40 tail tubular protein B phrog_457 tail protein tail 1 26204 28684
YP_002117809.1 NC_011107_p30 hypothetical protein phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 18234 18380
YP_002117807.1 NC_011107_p28 hypothetical protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 16813 17859
YP_002117797.1 NC_011107_p18 DnaG-like primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 7670 8494
YP_002117808.1 NC_011107_p29 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 17869 18237
YP_002117785.1 NC_011107_p6 hypothetical protein phrog_6951 unknown function unknown function 1 3165 3533
YP_002117826.1 NC_011107_p47 hypothetical protein phrog_4950 tail fiber protein tail 1 38202 38594
YP_002117824.1 NC_011107_p45 hypothetical protein phrog_17567 unknown function unknown function 1 36699 37139
YP_002117790.1 NC_011107_p11 hypothetical protein phrog_4342 unknown function unknown function 1 4641 4934
YP_002117795.1 NC_011107_p16 hypothetical protein phrog_2563 unknown function unknown function 1 6942 7484
YP_002117827.1 NC_011107_p48 hypothetical protein phrog_891 terminase small subunit head and packaging 1 38594 38899
YP_002117803.1 NC_011107_p24 hypothetical protein phrog_5437 unknown function unknown function 1 14037 14339
YP_002117814.1 NC_011107_p35 hypothetical protein phrog_18808 unknown function unknown function 1 21895 22125
YP_002117831.1 NC_011107_p52 phage lambda Rz1-like protein phrog_214 Rz-like spanin lysis 1 41348 41677