| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_011222 |
Definition |
Bacteroides phage B40-8, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
44929 |
Host Name |
Bacteroides fragilis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
46 |
%GC |
38.62 |
Number of singletons |
4 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_002221559.1 | NC_011222_p21 | hypothetical protein | phrog_11233 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 24038 | 24340 |
| YP_002221562.1 | NC_011222_p24 | hypothetical protein | phrog_34953 | unknown function | unknown function | 1 | 26651 | 27574 |
| YP_002221548.1 | NC_011222_p10 | peptidase | phrog_894 | endolysin | lysis | 1 | 15396 | 15794 |
| YP_002221550.1 | NC_011222_p12 | hypothetical protein | phrog_33469 | unknown function | unknown function | 1 | 16817 | 17062 |
| YP_002221576.1 | NC_011222_p38 | large subunit phage terminase | phrog_38 | terminase large subunit | head and packaging | 1 | 36086 | 37279 |
| YP_002221558.1 | NC_011222_p20 | hypothetical protein | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism | 1 | 23091 | 24035 |
| YP_002221561.1 | NC_011222_p23 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25668 | 26591 |
| YP_002221566.1 | NC_011222_p28 | hypothetical protein | phrog_23774 | unknown function | unknown function | 1 | 29792 | 30229 |
| YP_002221582.1 | NC_011222_p44 | hypothetical protein | phrog_8189 | unknown function | unknown function | 1 | 42598 | 43911 |
| YP_002221560.1 | NC_011222_p22 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 24889 | 25626 |
| YP_002221567.1 | NC_011222_p29 | hypothetical protein | phrog_36372 | unknown function | unknown function | 1 | 30226 | 30540 |
| YP_002221547.1 | NC_011222_p9 | hypothetical protein | phrog_15037 | unknown function | unknown function | 1 | 14977 | 15372 |
| YP_002221551.1 | NC_011222_p13 | hypothetical protein | phrog_28533 | unknown function | unknown function | 1 | 17380 | 17796 |
| YP_002221565.1 | NC_011222_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29473 | 29832 |
| YP_002221542.1 | NC_011222_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6152 | 6478 |
| YP_002221541.1 | NC_011222_p3 | hypothetical protein | phrog_20660 | tail length tape measure protein | tail | 1 | 3012 | 6152 |
| YP_002221543.1 | NC_011222_p5 | hypothetical protein | phrog_19383 | unknown function | unknown function | 1 | 6492 | 8324 |
| YP_002221554.1 | NC_011222_p16 | putatitve thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 19768 | 20565 |
| YP_002221571.1 | NC_011222_p33 | hypothetical protein | phrog_28660 | unknown function | unknown function | 1 | 32864 | 33238 |
| YP_002221546.1 | NC_011222_p8 | hypothetical protein | phrog_31915 | unknown function | unknown function | 1 | 14509 | 14868 |
| YP_002221549.1 | NC_011222_p11 | hypothetical protein | phrog_14010 | unknown function | unknown function | 1 | 15801 | 16406 |
| YP_002221581.1 | NC_011222_p43 | MP1 | phrog_7231 | virion structural protein | head and packaging | 1 | 41213 | 42529 |
| YP_002221575.1 | NC_011222_p37 | hypothetical protein | phrog_645 | Rnase E | DNA, RNA and nucleotide metabolism | 1 | 35166 | 35768 |
| YP_002221540.1 | NC_011222_p2 | hypothetical protein | phrog_8914 | virion structural protein | head and packaging | 1 | 2248 | 3000 |
| YP_002221578.1 | NC_011222_p40 | MP3 | phrog_7376 | portal protein | head and packaging | 1 | 38151 | 39884 |
| YP_002221556.1 | NC_011222_p18 | essential recombination function protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 21658 | 22290 |
| YP_002221572.1 | NC_011222_p34 | hypothetical protein | phrog_30925 | unknown function | unknown function | 1 | 33433 | 33723 |
| YP_002221584.1 | NC_011222_p46 | hypothetical protein | phrog_8145 | unknown function | unknown function | 1 | 44350 | 44919 |
| YP_002221552.1 | NC_011222_p14 | hypothetical protein | phrog_674 | unknown function | unknown function | 1 | 18042 | 18878 |
| YP_002221579.1 | NC_011222_p41 | hypothetical protein | phrog_30900 | unknown function | unknown function | 1 | 39847 | 40245 |
| YP_002221555.1 | NC_011222_p17 | hypothetical protein | phrog_33979 | unknown function | unknown function | 1 | 21009 | 21404 |
| YP_002221539.1 | NC_011222_p1 | hypothetical protein | phrog_34779 | unknown function | unknown function | 1 | 825 | 1151 |
| YP_002221570.1 | NC_011222_p32 | single-strand binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 32017 | 32442 |
| YP_002221577.1 | NC_011222_p39 | major protein 2 | phrog_8193 | major head protein | head and packaging | 1 | 37365 | 38003 |
| YP_002221580.1 | NC_011222_p42 | hypothetical protein | phrog_7970 | virion structural protein | head and packaging | 1 | 40245 | 41162 |
| YP_002221545.1 | NC_011222_p7 | tail fiber protein | phrog_33450 | tail fiber protein | tail | 1 | 8724 | 14417 |
| YP_002221573.1 | NC_011222_p35 | hypothetical protein | phrog_9236 | pyrophosphatase | other | 1 | 33747 | 34349 |
| YP_002221544.1 | NC_011222_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8384 | 8731 |
| YP_002221553.1 | NC_011222_p15 | DNA N-6-adenine-methyltransferase | phrog_111 | DNA methyltransferase | other | 1 | 19275 | 19757 |
| YP_002221569.1 | NC_011222_p31 | hypothetical protein | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 31326 | 31757 |
| YP_002221557.1 | NC_011222_p19 | hypothetical protein | phrog_757 | DNA methyltransferase | other | 1 | 22365 | 23078 |
| YP_002221568.1 | NC_011222_p30 | hypothetical protein | phrog_6141 | unknown function | unknown function | 1 | 30689 | 31339 |
| YP_002221564.1 | NC_011222_p26 | conserved phage protein pRha | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 28513 | 29217 |
| YP_002221563.1 | NC_011222_p25 | hypothetical protein | phrog_1770 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 27579 | 28157 |
| YP_002221583.1 | NC_011222_p45 | hypothetical protein | phrog_6195 | tail protein | tail | 1 | 43908 | 44360 |
| YP_002221574.1 | NC_011222_p36 | hypothetical protein | phrog_32578 | unknown function | unknown function | 1 | 34356 | 35021 |