| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_011267 |
Definition |
Mycobacterium phage Solon, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus. |
DB of origin |
REFSEQ |
Length |
49487 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
86 |
%GC |
63.84 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_002223989.1 | NC_011267_p48 | hypothetical protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 35734 | 36525 |
| YP_002224022.1 | NC_011267_p81 | hypothetical protein | phrog_2212 | unknown function | unknown function | -1 | 47349 | 47450 |
| YP_002223960.1 | NC_011267_p19 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 14322 | 14717 |
| YP_002223998.1 | NC_011267_p57 | hypothetical protein | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 39313 | 39789 |
| YP_002224012.1 | NC_011267_p71 | repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 44293 | 44805 |
| YP_002223956.1 | NC_011267_p15 | capsid | phrog_10 | major head protein | head and packaging | 1 | 12191 | 13189 |
| YP_002223984.1 | NC_011267_p43 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 32556 | 32912 |
| YP_002224014.1 | NC_011267_p73 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 45363 | 45632 |
| YP_002223994.1 | NC_011267_p53 | DNA topoisomerase primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38163 | 38687 |
| YP_002223967.1 | NC_011267_p26 | hypothetical protein | phrog_1543 | minor tail protein | tail | 1 | 21530 | 21712 |
| YP_002224008.1 | NC_011267_p67 | hypothetical protein | phrog_1763 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 42507 | 42689 |
| YP_002223947.1 | NC_011267_p6 | hypothetical protein | phrog_8174 | minor tail protein | tail | 1 | 3532 | 4383 |
| YP_002223944.1 | NC_011267_p3 | hypothetical protein | phrog_7087 | unknown function | unknown function | 1 | 1417 | 1653 |
| YP_002223980.1 | NC_011267_p39 | hypothetical protein | phrog_2387 | nucleotide kinase | other | -1 | 31612 | 32007 |
| YP_002223977.1 | NC_011267_p36 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 29282 | 29566 |
| YP_002223986.1 | NC_011267_p45 | hypothetical protein | phrog_1781 | unknown function | unknown function | -1 | 34806 | 35036 |
| YP_002223970.1 | NC_011267_p29 | hypothetical protein | phrog_981 | minor tail protein | tail | 1 | 23995 | 24342 |
| YP_002224003.1 | NC_011267_p62 | DnaB-like helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 40838 | 41647 |
| YP_002223968.1 | NC_011267_p27 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 21712 | 23514 |
| YP_002223958.1 | NC_011267_p17 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 13511 | 13960 |
| YP_002223950.1 | NC_011267_p9 | LysA | phrog_317 | endolysin | lysis | 1 | 5234 | 6628 |
| YP_002224017.1 | NC_011267_p76 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 46017 | 46184 |
| YP_002223988.1 | NC_011267_p47 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 35555 | 35737 |
| YP_002223962.1 | NC_011267_p21 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 15176 | 16027 |
| YP_002223955.1 | NC_011267_p14 | scaffold | phrog_233 | head scaffolding protein | head and packaging | 1 | 11669 | 12181 |
| YP_002224021.1 | NC_011267_p80 | hypothetical protein | phrog_5533 | unknown function | unknown function | -1 | 47134 | 47319 |
| YP_002223963.1 | NC_011267_p22 | tail scaffold protein | phrog_393 | tail assembly chaperone | tail | 1 | 16148 | 16947 |
| YP_002223948.1 | NC_011267_p7 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 4396 | 4653 |
| YP_002224016.1 | NC_011267_p75 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 45829 | 46017 |
| YP_002224010.1 | NC_011267_p69 | hypothetical protein | phrog_1584 | unknown function | unknown function | -1 | 43533 | 43859 |
| YP_002223972.1 | NC_011267_p31 | hypothetical protein | phrog_346 | minor tail protein | tail | 1 | 24711 | 26564 |
| YP_002223987.1 | NC_011267_p46 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 35067 | 35558 |
| YP_002223952.1 | NC_011267_p11 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 7606 | 9294 |
| YP_002223982.1 | NC_011267_p41 | hypothetical protein | phrog_1860 | unknown function | unknown function | -1 | 32174 | 32269 |
| YP_002223959.1 | NC_011267_p18 | hypothetical protein | phrog_320 | head closure Hc1 | connector | 1 | 13960 | 14322 |
| YP_002223981.1 | NC_011267_p40 | hypothetical protein | phrog_2035 | unknown function | unknown function | -1 | 32007 | 32186 |
| YP_002223942.1 | NC_011267_p1 | hypothetical protein | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 598 | 894 |
| YP_002223946.1 | NC_011267_p5 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 2826 | 3518 |
| YP_002223953.1 | NC_011267_p12 | portal | phrog_104 | portal protein | head and packaging | 1 | 9291 | 10733 |
| YP_002223978.1 | NC_011267_p37 | serine integrase | phrog_95 | integrase | integration and excision | 1 | 29637 | 31220 |
| YP_002224024.1 | NC_011267_p83 | hypothetical protein | phrog_828 | unknown function | unknown function | 1 | 47822 | 48028 |
| YP_002223964.1 | NC_011267_p23 | tail scaffold | phrog_330 | tail assembly chaperone | tail | 1 | 16148 | 16525 |
| YP_002224023.1 | NC_011267_p82 | hypothetical protein | phrog_2985 | unknown function | unknown function | 1 | 47584 | 47739 |
| YP_002223985.1 | NC_011267_p44 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 32940 | 34769 |
| YP_002224011.1 | NC_011267_p70 | hypothetical protein | phrog_1809 | unknown function | unknown function | -1 | 43856 | 44251 |
| YP_002223951.1 | NC_011267_p10 | LysB | phrog_102 | endolysin | lysis | 1 | 6618 | 7586 |
| YP_002223954.1 | NC_011267_p13 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 10730 | 11611 |
| YP_002223975.1 | NC_011267_p34 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 28458 | 28649 |
| YP_002224018.1 | NC_011267_p77 | hypothetical protein | phrog_2093 | unknown function | unknown function | -1 | 46181 | 46309 |
| YP_002224013.1 | NC_011267_p72 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 45067 | 45366 |
| YP_002224027.1 | NC_011267_p86 | hypothetical protein | phrog_15028 | unknown function | unknown function | 1 | 48781 | 49251 |
| YP_002223991.1 | NC_011267_p50 | RDF/NrdC | phrog_221 | metallo-phosphoesterase | other | -1 | 36663 | 37430 |
| YP_002224000.1 | NC_011267_p59 | hypothetical protein | phrog_722 | unknown function | unknown function | -1 | 39859 | 40107 |
| YP_002223995.1 | NC_011267_p54 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38533 | 39048 |
| YP_002223961.1 | NC_011267_p20 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 14721 | 15167 |
| YP_002223969.1 | NC_011267_p28 | hypothetical protein | phrog_352 | minor tail protein | tail | 1 | 23552 | 23998 |
| YP_002223973.1 | NC_011267_p32 | hypothetical protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 26557 | 28035 |
| YP_002223965.1 | NC_011267_p24 | tape measure | phrog_305 | tail length tape measure protein | tail | 1 | 16959 | 19430 |
| YP_002224019.1 | NC_011267_p78 | hypothetical protein | phrog_932 | unknown function | unknown function | -1 | 46330 | 46479 |
| YP_002223990.1 | NC_011267_p49 | hypothetical protein | phrog_1782 | site-specific recombination directionality factor RDF | integration and excision | -1 | 36518 | 36658 |
| YP_002223974.1 | NC_011267_p33 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 28128 | 28448 |
| YP_002224007.1 | NC_011267_p66 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42387 | 42503 |
| YP_002224025.1 | NC_011267_p84 | hypothetical protein | phrog_11620 | unknown function | unknown function | 1 | 48025 | 48189 |
| YP_002223949.1 | NC_011267_p8 | HNH endonuclease | phrog_1492 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 4653 | 5234 |
| YP_002223966.1 | NC_011267_p25 | hypothetical protein | phrog_106 | minor tail protein | tail | 1 | 19454 | 21511 |
| YP_002223992.1 | NC_011267_p51 | hypothetical protein | phrog_1503 | unknown function | unknown function | -1 | 37427 | 37606 |
| YP_002223945.1 | NC_011267_p4 | hypothetical protein | phrog_1197 | tail protein | tail | 1 | 1737 | 2807 |
| YP_002223993.1 | NC_011267_p52 | DNA primase | phrog_1167 | phosphofructokinase | other | -1 | 37603 | 38166 |
| YP_002223957.1 | NC_011267_p16 | hypothetical protein | phrog_1857 | head-tail connector protein | connector | 1 | 13275 | 13511 |
| YP_002223999.1 | NC_011267_p58 | hypothetical protein | phrog_1019 | unknown function | unknown function | -1 | 39776 | 39862 |
| YP_002223943.1 | NC_011267_p2 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 929 | 1369 |
| YP_002224001.1 | NC_011267_p60 | hypothetical protein | phrog_647 | unknown function | unknown function | -1 | 40100 | 40387 |
| YP_002224005.1 | NC_011267_p64 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 41777 | 42070 |
| YP_002223971.1 | NC_011267_p30 | hypothetical protein | phrog_1397 | unknown function | unknown function | 1 | 24339 | 24686 |
| YP_002224006.1 | NC_011267_p65 | hypothetical protein | phrog_2184 | unknown function | unknown function | -1 | 42067 | 42390 |
| YP_002224002.1 | NC_011267_p61 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 40563 | 40838 |
| YP_002223976.1 | NC_011267_p35 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 28646 | 29161 |
| YP_002223996.1 | NC_011267_p55 | hypothetical protein | phrog_1783 | unknown function | unknown function | -1 | 39027 | 39185 |
| YP_002224004.1 | NC_011267_p63 | hypothetical protein | phrog_1705 | unknown function | unknown function | -1 | 41634 | 41771 |
| YP_002224026.1 | NC_011267_p85 | hypothetical protein | phrog_3574 | unknown function | unknown function | 1 | 48499 | 48687 |
| YP_002223997.1 | NC_011267_p56 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 39182 | 39316 |
| YP_002224020.1 | NC_011267_p79 | hypothetical protein | phrog_5017 | unknown function | unknown function | -1 | 46769 | 47134 |
| YP_002223979.1 | NC_011267_p38 | hypothetical protein | phrog_1966 | unknown function | unknown function | -1 | 31343 | 31615 |
| YP_002224015.1 | NC_011267_p74 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 45629 | 45832 |
| YP_002224009.1 | NC_011267_p68 | RecB | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 42716 | 43540 |
| YP_002223983.1 | NC_011267_p42 | hypothetical protein | phrog_1971 | unknown function | unknown function | -1 | 32266 | 32559 |