Genomic map of Mycobacterium phage Troll4 (NC_011285)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_011285
Definition
Mycobacterium phage Troll4, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dclasvirinae; Plotvirus.
DB of origin
REFSEQ
Length
64618
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
84
%GC
59.61
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_002241498.1 NC_011285_p84 hypothetical protein phrog_780 unknown function unknown function 1 59937 60161
YP_002241423.1 NC_011285_p9 hypothetical protein phrog_64 portal protein head and packaging 1 6392 7966
YP_002241489.1 NC_011285_p75 hypothetical protein phrog_10394 unknown function unknown function 1 56756 56971
YP_002241497.1 NC_011285_p83 hypothetical protein phrog_11872 unknown function unknown function 1 59644 59940
YP_002241475.1 NC_011285_p61 hypothetical protein phrog_8720 unknown function unknown function 1 46552 47406
YP_002241479.1 NC_011285_p65 FabG/L-xylulose reductase phrog_3142 FabG-like 3-oxoacyl-(acyl-carrier-protein) reductase moron, auxiliary metabolic gene and host takeover 1 49038 49748
YP_002241455.1 NC_011285_p41 hypothetical protein phrog_11465 unknown function unknown function 1 34025 34606
YP_002241492.1 NC_011285_p78 hypothetical protein phrog_10814 unknown function unknown function 1 58016 58537
YP_002241456.1 NC_011285_p42 hypothetical protein phrog_636 unknown function unknown function -1 34612 35493
YP_002241470.1 NC_011285_p56 hypothetical protein phrog_549 unknown function unknown function 1 42852 43232
YP_002241469.1 NC_011285_p55 hypothetical protein phrog_10024 unknown function unknown function 1 42183 42671
YP_002241454.1 NC_011285_p40 LysB phrog_102 endolysin lysis 1 32756 34015
YP_002241486.1 NC_011285_p72 hypothetical protein phrog_10832 unknown function unknown function 1 55836 56189
YP_002241430.1 NC_011285_p16 hypothetical protein phrog_3990 major head protein head and packaging 1 10909 12093
YP_002241482.1 NC_011285_p68 ThyX phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 53712 54812
YP_002241444.1 NC_011285_p30 hypothetical protein phrog_346 minor tail protein tail 1 24317 26587
YP_002241427.1 NC_011285_p13 head protein phrog_115 minor head protein head and packaging 1 8792 9697
YP_002241446.1 NC_011285_p32 hypothetical protein phrog_553 minor tail protein tail 1 28635 29501
YP_002241441.1 NC_011285_p27 tapemeasure protein phrog_6435 tail length tape measure protein tail 1 16383 21155
YP_002241465.1 NC_011285_p51 hypothetical protein phrog_11197 unknown function unknown function 1 39344 39583
YP_002241433.1 NC_011285_p19 hypothetical protein phrog_4904 unknown function unknown function 1 12790 13197
YP_002241493.1 NC_011285_p79 hypothetical protein phrog_1581 unknown function unknown function 1 58537 58851
YP_002241485.1 NC_011285_p71 hypothetical protein phrog_2507 unknown function unknown function 1 55603 55839
YP_002241496.1 NC_011285_p82 hypothetical protein phrog_10449 unknown function unknown function 1 59346 59654
YP_002241450.1 NC_011285_p36 hypothetical protein phrog_9801 unknown function unknown function 1 31251 31505
YP_002241477.1 NC_011285_p63 methyltransferase phrog_6636 methyltransferase other 1 48027 48557
YP_002241426.1 NC_011285_p12 hypothetical protein phrog_2864 unknown function unknown function 1 8616 8795
YP_002241438.1 NC_011285_p24 hypothetical protein phrog_4971 major tail protein tail 1 14563 15405
YP_002241466.1 NC_011285_p52 hypothetical protein phrog_17737 unknown function unknown function 1 39641 39856
YP_002241480.1 NC_011285_p66 DNA Pol III alpha subunit phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism 1 49859 53161
YP_002241464.1 NC_011285_p50 hypothetical protein phrog_5307 unknown function unknown function 1 38676 39266
YP_002241421.1 NC_011285_p7 VIP2 phrog_15359 unknown function unknown function 1 3837 4607
YP_002241478.1 NC_011285_p64 hypothetical protein phrog_10271 unknown function unknown function 1 48554 49045
YP_002241432.1 NC_011285_p18 hypothetical protein phrog_5274 unknown function unknown function 1 12461 12793
YP_002241428.1 NC_011285_p14 hypothetical protein phrog_4866 head scaffolding protein head and packaging 1 9730 10437
YP_002241449.1 NC_011285_p35 LysA phrog_1512 endolysin lysis 1 30271 31254
YP_002241457.1 NC_011285_p43 hypothetical protein phrog_11944 unknown function unknown function -1 35577 35807
YP_002241420.1 NC_011285_p6 hypothetical protein phrog_11599 unknown function unknown function 1 2137 3840
YP_002241460.1 NC_011285_p46 hypothetical protein phrog_7969 unknown function unknown function 1 36800 37099
YP_002241495.1 NC_011285_p81 hypothetical protein phrog_25303 unknown function unknown function 1 59089 59349
YP_002241463.1 NC_011285_p49 hypothetical protein phrog_11235 unknown function unknown function 1 38304 38612
YP_002241458.1 NC_011285_p44 hypothetical protein phrog_10424 unknown function unknown function -1 35807 36292
YP_002241487.1 NC_011285_p73 hypothetical protein phrog_10494 unknown function unknown function 1 56186 56461
YP_002241468.1 NC_011285_p54 hypothetical protein phrog_10722 unknown function unknown function 1 41799 42080
YP_002241474.1 NC_011285_p60 hypothetical protein phrog_10064 unknown function unknown function 1 45480 46388
YP_002241462.1 NC_011285_p48 hypothetical protein phrog_13277 unknown function unknown function 1 38207 38311
YP_002241422.1 NC_011285_p8 terminase phrog_2 terminase large subunit head and packaging 1 4604 6370
YP_002241429.1 NC_011285_p15 hypothetical protein phrog_5042 unknown function unknown function 1 10453 10872
YP_002241440.1 NC_011285_p26 hypothetical protein phrog_6778 tail assembly chaperone tail 1 16163 16381
YP_002241490.1 NC_011285_p76 hypothetical protein phrog_658 unknown function unknown function 1 56975 57415
YP_002241443.1 NC_011285_p29 hypothetical protein phrog_1885 minor tail protein tail 1 22662 24317
YP_002241437.1 NC_011285_p23 major tail subunit phrog_5278 unknown function unknown function 1 14373 14573
YP_002241415.1 NC_011285_p1 hypothetical protein phrog_5460 unknown function unknown function 1 1 309
YP_002241439.1 NC_011285_p25 hypothetical protein phrog_4336 tail assembly chaperone tail 1 15487 16140
YP_002241467.1 NC_011285_p53 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 39859 41802
YP_002241451.1 NC_011285_p37 hypothetical protein phrog_21841 unknown function unknown function 1 31519 31776
YP_002241431.1 NC_011285_p17 hypothetical protein phrog_5318 unknown function unknown function 1 12090 12458
YP_002241484.1 NC_011285_p70 hypothetical protein phrog_1981 unknown function unknown function 1 55017 55637
YP_002241459.1 NC_011285_p45 hypothetical protein phrog_9402 unknown function unknown function 1 36370 36759
YP_002241424.1 NC_011285_p10 hypothetical protein phrog_1375 unknown function unknown function 1 7986 8198
YP_002241461.1 NC_011285_p47 hypothetical protein phrog_421 unknown function unknown function 1 37101 38210
YP_002241419.1 NC_011285_p5 hypothetical protein phrog_12064 unknown function unknown function 1 1965 2126
YP_002241425.1 NC_011285_p11 tail assembly/metal protease phrog_5556 tail protein tail 1 8195 8656
YP_002241445.1 NC_011285_p31 hypothetical protein phrog_382 minor tail protein with lysin activity tail 1 26587 28635
YP_002241435.1 NC_011285_p21 hypothetical protein phrog_4995 unknown function unknown function 1 13549 13968
YP_002241473.1 NC_011285_p59 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 44619 45479
YP_002241494.1 NC_011285_p80 hypothetical protein phrog_8685 unknown function unknown function 1 58848 59096
YP_002241418.1 NC_011285_p4 hypothetical protein phrog_10761 unknown function unknown function 1 1772 1936
YP_002241447.1 NC_011285_p33 hypothetical protein phrog_6443 unknown function unknown function 1 29511 29831
YP_002241434.1 NC_011285_p20 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 13190 13552
YP_002241472.1 NC_011285_p58 hypothetical protein phrog_8491 unknown function unknown function 1 44417 44605
YP_002241491.1 NC_011285_p77 hypothetical protein phrog_10149 unknown function unknown function 1 57427 57999
YP_002241417.1 NC_011285_p3 hypothetical protein phrog_10843 unknown function unknown function 1 1568 1762
YP_002241452.1 NC_011285_p38 hypothetical protein phrog_8515 unknown function unknown function 1 31776 32315
YP_002241442.1 NC_011285_p28 hypothetical protein phrog_7161 minor tail protein tail 1 21145 22665
YP_002241481.1 NC_011285_p67 hypothetical protein phrog_10638 unknown function unknown function 1 53163 53684
YP_002241448.1 NC_011285_p34 hypothetical protein phrog_3758 virion structural protein head and packaging 1 29834 30262
YP_002241416.1 NC_011285_p2 hypothetical protein phrog_7407 unknown function unknown function 1 421 1524
YP_002241436.1 NC_011285_p22 hypothetical protein phrog_10150 unknown function unknown function 1 14005 14361
YP_002241471.1 NC_011285_p57 hypothetical protein phrog_1218 exonuclease DNA, RNA and nucleotide metabolism 1 43237 44415
YP_002241488.1 NC_011285_p74 hypothetical protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 56464 56697
YP_002241453.1 NC_011285_p39 hypothetical protein phrog_726 unknown function unknown function 1 32299 32754
YP_002241476.1 NC_011285_p62 nucleotidase phrog_415 polynucleotide kinase other 1 47410 48027
YP_002241483.1 NC_011285_p69 hypothetical protein phrog_18095 unknown function unknown function 1 54809 54985