Genomic map of Mycobacterium virus Fruitloop (NC_011288)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_011288
Definition
Mycobacterium phage Fruitloop, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus.
DB of origin
REFSEQ
Length
58471
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
102
%GC
61.77
Number of singletons
3
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_002241687.1 NC_011288_p2 terminase phrog_9 terminase large subunit head and packaging 1 587 2224
YP_002241754.1 NC_011288_p69 hypothetical protein singleton unknown function unknown function 1 45821 46036
YP_002241763.1 NC_011288_p78 hypothetical protein phrog_647 unknown function unknown function 1 48745 49029
YP_002241690.1 NC_011288_p5 scaffold phrog_2592 head scaffolding protein head and packaging 1 4394 5044
YP_002241700.1 NC_011288_p15 hypothetical protein phrog_106 minor tail protein tail 1 13058 14767
YP_002241783.1 NC_011288_p98 hypothetical protein phrog_2057 unknown function unknown function 1 55083 55244
YP_002241778.1 NC_011288_p93 hypothetical protein phrog_1869 unknown function unknown function 1 53838 54005
YP_002241782.1 NC_011288_p97 hypothetical protein phrog_1385 unknown function unknown function 1 54848 55090
YP_002241729.1 NC_011288_p44 hypothetical protein phrog_3949 transcriptional repressor transcription regulation -1 35091 35504
YP_002241753.1 NC_011288_p68 hypothetical protein phrog_7196 unknown function unknown function 1 45627 45818
YP_002241752.1 NC_011288_p67 hypothetical protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 44726 45490
YP_002241695.1 NC_011288_p10 hypothetical protein phrog_813 head-tail adaptor connector 1 7131 7505
YP_002241775.1 NC_011288_p90 hypothetical protein phrog_7643 unknown function unknown function 1 52430 52768
YP_002241732.1 NC_011288_p47 hypothetical protein phrog_2025 unknown function unknown function 1 37117 37326
YP_002241773.1 NC_011288_p88 hypothetical protein phrog_1091 unknown function unknown function 1 52115 52294
YP_002241751.1 NC_011288_p66 hypothetical protein singleton unknown function unknown function 1 44454 44726
YP_002241709.1 NC_011288_p24 hypothetical protein phrog_754 minor tail protein tail 1 24297 25277
YP_002241764.1 NC_011288_p79 hypothetical protein phrog_722 unknown function unknown function 1 49022 49300
YP_002241777.1 NC_011288_p92 hypothetical protein phrog_2474 MerR-like transcriptional regulator transcription regulation 1 53617 53841
YP_002241745.1 NC_011288_p60 hypothetical protein phrog_3290 single strand annealing protein DNA, RNA and nucleotide metabolism 1 41616 42194
YP_002241750.1 NC_011288_p65 hypothetical protein phrog_2259 Rnase H DNA, RNA and nucleotide metabolism 1 43885 44457
YP_002241747.1 NC_011288_p62 hypothetical protein phrog_6938 unknown function unknown function 1 43224 43451
YP_002241758.1 NC_011288_p73 hypothetical protein phrog_1943 unknown function unknown function 1 47530 47709
YP_002241743.1 NC_011288_p58 hypothetical protein phrog_1834 unknown function unknown function 1 41130 41360
YP_002241757.1 NC_011288_p72 hypothetical protein phrog_4738 transcriptional repressor transcription regulation 1 47330 47533
YP_002241701.1 NC_011288_p16 hypothetical protein phrog_110 minor tail protein tail 1 14838 16547
YP_002241711.1 NC_011288_p26 hypothetical protein phrog_411 unknown function unknown function 1 25628 25912
YP_002241723.1 NC_011288_p38 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 31313 31549
YP_002241692.1 NC_011288_p7 hypothetical protein phrog_2377 head-tail adaptor Ad1 connector 1 5884 6450
YP_002241727.1 NC_011288_p42 hypothetical protein phrog_2268 antitoxin from a toxin-antitoxin system moron, auxiliary metabolic gene and host takeover 1 34108 34356
YP_002241784.1 NC_011288_p99 glycosyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 55261 56697
YP_002241688.1 NC_011288_p3 portal phrog_104 portal protein head and packaging 1 2255 3625
YP_002241719.1 NC_011288_p34 Exo phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 29529 30350
YP_002241768.1 NC_011288_p83 hypothetical protein phrog_6520 unknown function unknown function 1 50150 50569
YP_002241760.1 NC_011288_p75 hypothetical protein phrog_2591 unknown function unknown function 1 48070 48255
YP_002241721.1 NC_011288_p36 hypothetical protein phrog_1839 unknown function unknown function 1 30645 30737
YP_002241759.1 NC_011288_p74 hypothetical protein phrog_1546 unknown function unknown function 1 47706 48077
YP_002241742.1 NC_011288_p57 hypothetical protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 40613 40978
YP_002241785.1 NC_011288_p100 hypothetical protein phrog_3297 kinase other 1 56715 57173
YP_002241755.1 NC_011288_p70 hypothetical protein phrog_2582 unknown function unknown function 1 46117 46470
YP_002241691.1 NC_011288_p6 capsid phrog_267 major head protein head and packaging 1 5063 5884
YP_002241716.1 NC_011288_p31 holin phrog_443 holin lysis 1 28680 28913
YP_002241717.1 NC_011288_p32 hypothetical protein phrog_404 minor tail protein tail 1 28910 29284
YP_002241766.1 NC_011288_p81 hypothetical protein phrog_3381 unknown function unknown function 1 49490 49693
YP_002241787.1 NC_011288_p102 hypothetical protein phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 57379 58002
YP_002241746.1 NC_011288_p61 hypothetical protein phrog_2233 unknown function unknown function 1 42550 43227
YP_002241765.1 NC_011288_p80 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision 1 49297 49464
YP_002241704.1 NC_011288_p19 hypothetical protein phrog_382 minor tail protein with lysin activity tail 1 19963 21849
YP_002241733.1 NC_011288_p48 hypothetical protein phrog_1840 excisionase integration and excision 1 37415 37678
YP_002241708.1 NC_011288_p23 hypothetical protein phrog_2012 minor tail protein tail 1 23662 24300
YP_002241705.1 NC_011288_p20 hypothetical protein phrog_2106 minor tail protein tail 1 21852 23012
YP_002241713.1 NC_011288_p28 hypothetical protein phrog_747 unknown function unknown function 1 26288 26521
YP_002241734.1 NC_011288_p49 hypothetical protein phrog_1816 unknown function unknown function 1 37675 37824
YP_002241744.1 NC_011288_p59 hypothetical protein phrog_2632 unknown function unknown function 1 41357 41602
YP_002241774.1 NC_011288_p89 hypothetical protein singleton unknown function unknown function 1 52276 52392
YP_002241780.1 NC_011288_p95 hypothetical protein phrog_11849 membrane protein moron, auxiliary metabolic gene and host takeover 1 54200 54352
YP_002241770.1 NC_011288_p85 hypothetical protein phrog_647 unknown function unknown function 1 51126 51539
YP_002241739.1 NC_011288_p54 hypothetical protein phrog_658 unknown function unknown function 1 39383 39718
YP_002241738.1 NC_011288_p53 hypothetical protein phrog_7605 unknown function unknown function 1 39191 39379
YP_002241702.1 NC_011288_p17 hypothetical protein phrog_732 minor tail protein tail 1 16584 17432
YP_002241689.1 NC_011288_p4 head assembly phrog_1522 head maturation protease head and packaging 1 3612 4367
YP_002241707.1 NC_011288_p22 hypothetical protein phrog_2005 minor tail protein tail 1 23394 23648
YP_002241728.1 NC_011288_p43 hypothetical protein phrog_1948 unknown function unknown function -1 34367 34858
YP_002241698.1 NC_011288_p13 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8578 9129
YP_002241693.1 NC_011288_p8 hypothetical protein phrog_763 head-tail adaptor connector 1 6447 6779
YP_002241725.1 NC_011288_p40 integrase phrog_1 integrase integration and excision 1 32560 33678
YP_002241730.1 NC_011288_p45 hypothetical protein phrog_2104 unknown function unknown function 1 35701 36060
YP_002241735.1 NC_011288_p50 hypothetical protein phrog_3381 unknown function unknown function 1 37821 37997
YP_002241748.1 NC_011288_p63 hypothetical protein phrog_2070 unknown function unknown function 1 43508 43678
YP_002241731.1 NC_011288_p46 hypothetical protein phrog_130 anti-repressor Ant transcription regulation 1 36116 37120
YP_002241741.1 NC_011288_p56 hypothetical protein phrog_2096 unknown function unknown function 1 40116 40616
YP_002241703.1 NC_011288_p18 hypothetical protein phrog_346 minor tail protein tail 1 17429 19966
YP_002241710.1 NC_011288_p25 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25282 25479
YP_002241771.1 NC_011288_p86 hypothetical protein phrog_1901 unknown function unknown function 1 51589 51855
YP_002241740.1 NC_011288_p55 WhiB/HNH endonuclease phrog_1333 unknown function unknown function 1 39718 40119
YP_002241724.1 NC_011288_p39 hypothetical protein phrog_5419 unknown function unknown function -1 31771 32115
YP_002241786.1 NC_011288_p101 hypothetical protein phrog_1693 unknown function unknown function 1 57137 57382
YP_002241694.1 NC_011288_p9 hypothetical protein phrog_1929 head-tail connector protein connector 1 6782 7111
YP_002241756.1 NC_011288_p71 hypothetical protein phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover 1 46844 47176
YP_002241697.1 NC_011288_p12 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8578 9514
YP_002241726.1 NC_011288_p41 hypothetical protein phrog_1213 RelE-like toxin moron, auxiliary metabolic gene and host takeover 1 33800 34111
YP_002241686.1 NC_011288_p1 hypothetical protein phrog_226 minor tail protein tail 1 109 564
YP_002241722.1 NC_011288_p37 hypothetical protein phrog_357 transcriptional repressor transcription regulation -1 30786 31358
YP_002241737.1 NC_011288_p52 hypothetical protein phrog_1849 unknown function unknown function 1 38913 39194
YP_002241715.1 NC_011288_p30 LysB phrog_102 endolysin lysis 1 27672 28670
YP_002241776.1 NC_011288_p91 hypothetical protein phrog_1467 unknown function unknown function 1 52881 53507
YP_002241712.1 NC_011288_p27 hypothetical protein phrog_1172 unknown function unknown function 1 26062 26214
YP_002241706.1 NC_011288_p21 hypothetical protein phrog_240 head protein head and packaging 1 23030 23371
YP_002241749.1 NC_011288_p64 hypothetical protein phrog_1311 unknown function unknown function 1 43656 43811
YP_002241714.1 NC_011288_p29 LysA phrog_700 endolysin lysis 1 26518 27672
YP_002241736.1 NC_011288_p51 hypothetical protein phrog_1797 unknown function unknown function 1 37994 38665
YP_002241767.1 NC_011288_p82 hypothetical protein phrog_11026 unknown function unknown function 1 49695 50153
YP_002241699.1 NC_011288_p14 tapemeasure protein phrog_1942 tail length tape measure protein tail 1 9533 13057
YP_002241779.1 NC_011288_p94 hypothetical protein phrog_1694 unknown function unknown function 1 54018 54203
YP_002241718.1 NC_011288_p33 hypothetical protein phrog_2004 unknown function unknown function 1 29309 29542
YP_002241781.1 NC_011288_p96 hypothetical protein phrog_1186 unknown function unknown function 1 54438 54851
YP_002241761.1 NC_011288_p76 hypothetical protein phrog_722 unknown function unknown function 1 48252 48602
YP_002241696.1 NC_011288_p11 major tail subunit phrog_476 major tail protein tail 1 7632 8441
YP_002241720.1 NC_011288_p35 hypothetical protein phrog_1791 unknown function unknown function 1 30437 30652
YP_002241769.1 NC_011288_p84 hypothetical protein phrog_2021 unknown function unknown function 1 50566 51129
YP_002241762.1 NC_011288_p77 hypothetical protein phrog_16849 unknown function unknown function 1 48599 48748
YP_002241772.1 NC_011288_p87 hypothetical protein phrog_6625 unknown function unknown function 1 51855 52118