| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_011288 |
Definition |
Mycobacterium phage Fruitloop, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus. |
DB of origin |
REFSEQ |
Length |
58471 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
102 |
%GC |
61.77 |
Number of singletons |
3 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_002241687.1 | NC_011288_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 587 | 2224 |
| YP_002241754.1 | NC_011288_p69 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45821 | 46036 |
| YP_002241763.1 | NC_011288_p78 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 48745 | 49029 |
| YP_002241690.1 | NC_011288_p5 | scaffold | phrog_2592 | head scaffolding protein | head and packaging | 1 | 4394 | 5044 |
| YP_002241700.1 | NC_011288_p15 | hypothetical protein | phrog_106 | minor tail protein | tail | 1 | 13058 | 14767 |
| YP_002241783.1 | NC_011288_p98 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 55083 | 55244 |
| YP_002241778.1 | NC_011288_p93 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 53838 | 54005 |
| YP_002241782.1 | NC_011288_p97 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 54848 | 55090 |
| YP_002241729.1 | NC_011288_p44 | hypothetical protein | phrog_3949 | transcriptional repressor | transcription regulation | -1 | 35091 | 35504 |
| YP_002241753.1 | NC_011288_p68 | hypothetical protein | phrog_7196 | unknown function | unknown function | 1 | 45627 | 45818 |
| YP_002241752.1 | NC_011288_p67 | hypothetical protein | phrog_2447 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 44726 | 45490 |
| YP_002241695.1 | NC_011288_p10 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 7131 | 7505 |
| YP_002241775.1 | NC_011288_p90 | hypothetical protein | phrog_7643 | unknown function | unknown function | 1 | 52430 | 52768 |
| YP_002241732.1 | NC_011288_p47 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 37117 | 37326 |
| YP_002241773.1 | NC_011288_p88 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 52115 | 52294 |
| YP_002241751.1 | NC_011288_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44454 | 44726 |
| YP_002241709.1 | NC_011288_p24 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 24297 | 25277 |
| YP_002241764.1 | NC_011288_p79 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 49022 | 49300 |
| YP_002241777.1 | NC_011288_p92 | hypothetical protein | phrog_2474 | MerR-like transcriptional regulator | transcription regulation | 1 | 53617 | 53841 |
| YP_002241745.1 | NC_011288_p60 | hypothetical protein | phrog_3290 | single strand annealing protein | DNA, RNA and nucleotide metabolism | 1 | 41616 | 42194 |
| YP_002241750.1 | NC_011288_p65 | hypothetical protein | phrog_2259 | Rnase H | DNA, RNA and nucleotide metabolism | 1 | 43885 | 44457 |
| YP_002241747.1 | NC_011288_p62 | hypothetical protein | phrog_6938 | unknown function | unknown function | 1 | 43224 | 43451 |
| YP_002241758.1 | NC_011288_p73 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 47530 | 47709 |
| YP_002241743.1 | NC_011288_p58 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 41130 | 41360 |
| YP_002241757.1 | NC_011288_p72 | hypothetical protein | phrog_4738 | transcriptional repressor | transcription regulation | 1 | 47330 | 47533 |
| YP_002241701.1 | NC_011288_p16 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 14838 | 16547 |
| YP_002241711.1 | NC_011288_p26 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 25628 | 25912 |
| YP_002241723.1 | NC_011288_p38 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 31313 | 31549 |
| YP_002241692.1 | NC_011288_p7 | hypothetical protein | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 5884 | 6450 |
| YP_002241727.1 | NC_011288_p42 | hypothetical protein | phrog_2268 | antitoxin from a toxin-antitoxin system | moron, auxiliary metabolic gene and host takeover | 1 | 34108 | 34356 |
| YP_002241784.1 | NC_011288_p99 | glycosyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 55261 | 56697 |
| YP_002241688.1 | NC_011288_p3 | portal | phrog_104 | portal protein | head and packaging | 1 | 2255 | 3625 |
| YP_002241719.1 | NC_011288_p34 | Exo | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29529 | 30350 |
| YP_002241768.1 | NC_011288_p83 | hypothetical protein | phrog_6520 | unknown function | unknown function | 1 | 50150 | 50569 |
| YP_002241760.1 | NC_011288_p75 | hypothetical protein | phrog_2591 | unknown function | unknown function | 1 | 48070 | 48255 |
| YP_002241721.1 | NC_011288_p36 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 30645 | 30737 |
| YP_002241759.1 | NC_011288_p74 | hypothetical protein | phrog_1546 | unknown function | unknown function | 1 | 47706 | 48077 |
| YP_002241742.1 | NC_011288_p57 | hypothetical protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40613 | 40978 |
| YP_002241785.1 | NC_011288_p100 | hypothetical protein | phrog_3297 | kinase | other | 1 | 56715 | 57173 |
| YP_002241755.1 | NC_011288_p70 | hypothetical protein | phrog_2582 | unknown function | unknown function | 1 | 46117 | 46470 |
| YP_002241691.1 | NC_011288_p6 | capsid | phrog_267 | major head protein | head and packaging | 1 | 5063 | 5884 |
| YP_002241716.1 | NC_011288_p31 | holin | phrog_443 | holin | lysis | 1 | 28680 | 28913 |
| YP_002241717.1 | NC_011288_p32 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 28910 | 29284 |
| YP_002241766.1 | NC_011288_p81 | hypothetical protein | phrog_3381 | unknown function | unknown function | 1 | 49490 | 49693 |
| YP_002241787.1 | NC_011288_p102 | hypothetical protein | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 57379 | 58002 |
| YP_002241746.1 | NC_011288_p61 | hypothetical protein | phrog_2233 | unknown function | unknown function | 1 | 42550 | 43227 |
| YP_002241765.1 | NC_011288_p80 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | 1 | 49297 | 49464 |
| YP_002241704.1 | NC_011288_p19 | hypothetical protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 19963 | 21849 |
| YP_002241733.1 | NC_011288_p48 | hypothetical protein | phrog_1840 | excisionase | integration and excision | 1 | 37415 | 37678 |
| YP_002241708.1 | NC_011288_p23 | hypothetical protein | phrog_2012 | minor tail protein | tail | 1 | 23662 | 24300 |
| YP_002241705.1 | NC_011288_p20 | hypothetical protein | phrog_2106 | minor tail protein | tail | 1 | 21852 | 23012 |
| YP_002241713.1 | NC_011288_p28 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 26288 | 26521 |
| YP_002241734.1 | NC_011288_p49 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 37675 | 37824 |
| YP_002241744.1 | NC_011288_p59 | hypothetical protein | phrog_2632 | unknown function | unknown function | 1 | 41357 | 41602 |
| YP_002241774.1 | NC_011288_p89 | hypothetical protein | singleton | unknown function | unknown function | 1 | 52276 | 52392 |
| YP_002241780.1 | NC_011288_p95 | hypothetical protein | phrog_11849 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 54200 | 54352 |
| YP_002241770.1 | NC_011288_p85 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 51126 | 51539 |
| YP_002241739.1 | NC_011288_p54 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 39383 | 39718 |
| YP_002241738.1 | NC_011288_p53 | hypothetical protein | phrog_7605 | unknown function | unknown function | 1 | 39191 | 39379 |
| YP_002241702.1 | NC_011288_p17 | hypothetical protein | phrog_732 | minor tail protein | tail | 1 | 16584 | 17432 |
| YP_002241689.1 | NC_011288_p4 | head assembly | phrog_1522 | head maturation protease | head and packaging | 1 | 3612 | 4367 |
| YP_002241707.1 | NC_011288_p22 | hypothetical protein | phrog_2005 | minor tail protein | tail | 1 | 23394 | 23648 |
| YP_002241728.1 | NC_011288_p43 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 34367 | 34858 |
| YP_002241698.1 | NC_011288_p13 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8578 | 9129 |
| YP_002241693.1 | NC_011288_p8 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 6447 | 6779 |
| YP_002241725.1 | NC_011288_p40 | integrase | phrog_1 | integrase | integration and excision | 1 | 32560 | 33678 |
| YP_002241730.1 | NC_011288_p45 | hypothetical protein | phrog_2104 | unknown function | unknown function | 1 | 35701 | 36060 |
| YP_002241735.1 | NC_011288_p50 | hypothetical protein | phrog_3381 | unknown function | unknown function | 1 | 37821 | 37997 |
| YP_002241748.1 | NC_011288_p63 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 43508 | 43678 |
| YP_002241731.1 | NC_011288_p46 | hypothetical protein | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 36116 | 37120 |
| YP_002241741.1 | NC_011288_p56 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 40116 | 40616 |
| YP_002241703.1 | NC_011288_p18 | hypothetical protein | phrog_346 | minor tail protein | tail | 1 | 17429 | 19966 |
| YP_002241710.1 | NC_011288_p25 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25282 | 25479 |
| YP_002241771.1 | NC_011288_p86 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 51589 | 51855 |
| YP_002241740.1 | NC_011288_p55 | WhiB/HNH endonuclease | phrog_1333 | unknown function | unknown function | 1 | 39718 | 40119 |
| YP_002241724.1 | NC_011288_p39 | hypothetical protein | phrog_5419 | unknown function | unknown function | -1 | 31771 | 32115 |
| YP_002241786.1 | NC_011288_p101 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 57137 | 57382 |
| YP_002241694.1 | NC_011288_p9 | hypothetical protein | phrog_1929 | head-tail connector protein | connector | 1 | 6782 | 7111 |
| YP_002241756.1 | NC_011288_p71 | hypothetical protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 46844 | 47176 |
| YP_002241697.1 | NC_011288_p12 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8578 | 9514 |
| YP_002241726.1 | NC_011288_p41 | hypothetical protein | phrog_1213 | RelE-like toxin | moron, auxiliary metabolic gene and host takeover | 1 | 33800 | 34111 |
| YP_002241686.1 | NC_011288_p1 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 109 | 564 |
| YP_002241722.1 | NC_011288_p37 | hypothetical protein | phrog_357 | transcriptional repressor | transcription regulation | -1 | 30786 | 31358 |
| YP_002241737.1 | NC_011288_p52 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 38913 | 39194 |
| YP_002241715.1 | NC_011288_p30 | LysB | phrog_102 | endolysin | lysis | 1 | 27672 | 28670 |
| YP_002241776.1 | NC_011288_p91 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 52881 | 53507 |
| YP_002241712.1 | NC_011288_p27 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 26062 | 26214 |
| YP_002241706.1 | NC_011288_p21 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 23030 | 23371 |
| YP_002241749.1 | NC_011288_p64 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 43656 | 43811 |
| YP_002241714.1 | NC_011288_p29 | LysA | phrog_700 | endolysin | lysis | 1 | 26518 | 27672 |
| YP_002241736.1 | NC_011288_p51 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 37994 | 38665 |
| YP_002241767.1 | NC_011288_p82 | hypothetical protein | phrog_11026 | unknown function | unknown function | 1 | 49695 | 50153 |
| YP_002241699.1 | NC_011288_p14 | tapemeasure protein | phrog_1942 | tail length tape measure protein | tail | 1 | 9533 | 13057 |
| YP_002241779.1 | NC_011288_p94 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 54018 | 54203 |
| YP_002241718.1 | NC_011288_p33 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 29309 | 29542 |
| YP_002241781.1 | NC_011288_p96 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 54438 | 54851 |
| YP_002241761.1 | NC_011288_p76 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 48252 | 48602 |
| YP_002241696.1 | NC_011288_p11 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 7632 | 8441 |
| YP_002241720.1 | NC_011288_p35 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 30437 | 30652 |
| YP_002241769.1 | NC_011288_p84 | hypothetical protein | phrog_2021 | unknown function | unknown function | 1 | 50566 | 51129 |
| YP_002241762.1 | NC_011288_p77 | hypothetical protein | phrog_16849 | unknown function | unknown function | 1 | 48599 | 48748 |
| YP_002241772.1 | NC_011288_p87 | hypothetical protein | phrog_6625 | unknown function | unknown function | 1 | 51855 | 52118 |