| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_011291 |
Definition |
Mycobacterium phage Brujita, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chebruvirinae; Brujitavirus. |
DB of origin |
REFSEQ |
Length |
47057 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
74 |
%GC |
66.77 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_002241986.1 | NC_011291_p3 | hypothetical protein | phrog_16366 | membrane associated protein | moron, auxiliary metabolic gene and host takeover | 1 | 2122 | 2292 |
| YP_002241985.1 | NC_011291_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 522 | 2081 |
| YP_002242027.1 | NC_011291_p44 | hypothetical protein | phrog_5806 | unknown function | unknown function | 1 | 32923 | 33054 |
| YP_002241993.1 | NC_011291_p10 | hypothetical protein | phrog_1531 | head closure | connector | 1 | 7530 | 7922 |
| YP_002241984.1 | NC_011291_p1 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 62 | 541 |
| YP_002242018.1 | NC_011291_p35 | excisionase | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 29623 | 29778 |
| YP_002242028.1 | NC_011291_p45 | hypothetical protein | phrog_11260 | unknown function | unknown function | 1 | 33015 | 33137 |
| YP_002242054.1 | NC_011291_p71 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 44764 | 45021 |
| YP_002242042.1 | NC_011291_p59 | hypothetical protein | phrog_5921 | unknown function | unknown function | 1 | 39173 | 39319 |
| YP_002242038.1 | NC_011291_p55 | DNA methyltransferase | phrog_67 | DNA methyltransferase | other | 1 | 37346 | 37996 |
| YP_002242010.1 | NC_011291_p27 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 24377 | 25072 |
| YP_002242003.1 | NC_011291_p20 | hypothetical protein | phrog_732 | minor tail protein | tail | 1 | 18241 | 19092 |
| YP_002242020.1 | NC_011291_p37 | hypothetical protein | phrog_3507 | unknown function | unknown function | 1 | 30641 | 30940 |
| YP_002242026.1 | NC_011291_p43 | hypothetical protein | phrog_5559 | unknown function | unknown function | 1 | 32747 | 32926 |
| YP_002242050.1 | NC_011291_p67 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 43528 | 43734 |
| YP_002242033.1 | NC_011291_p50 | hypothetical protein | phrog_4387 | unknown function | unknown function | 1 | 35851 | 36060 |
| YP_002242015.1 | NC_011291_p32 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 27623 | 27982 |
| YP_002241990.1 | NC_011291_p7 | capsid | phrog_10 | major head protein | head and packaging | 1 | 5105 | 6652 |
| YP_002242055.1 | NC_011291_p72 | hypothetical protein | phrog_4447 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 45035 | 45931 |
| YP_002242034.1 | NC_011291_p51 | hypothetical protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 36162 | 36533 |
| YP_002242012.1 | NC_011291_p29 | LysA | phrog_6707 | endolysin | lysis | 1 | 25302 | 26246 |
| YP_002242040.1 | NC_011291_p57 | hypothetical protein | phrog_2060 | DNA methyltransferase | other | 1 | 38345 | 38749 |
| YP_002242039.1 | NC_011291_p56 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 37993 | 38289 |
| YP_002241992.1 | NC_011291_p9 | hypothetical protein | phrog_442 | head-tail adaptor | connector | 1 | 7024 | 7533 |
| YP_002242004.1 | NC_011291_p21 | hypothetical protein | phrog_346 | minor tail protein | tail | 1 | 19089 | 21620 |
| YP_002242029.1 | NC_011291_p46 | HNH endonuclease | phrog_1492 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 33137 | 33628 |
| YP_002242023.1 | NC_011291_p40 | hypothetical protein | phrog_4656 | unknown function | unknown function | 1 | 31964 | 32209 |
| YP_002242008.1 | NC_011291_p25 | hypothetical protein | phrog_8357 | unknown function | unknown function | 1 | 23946 | 24176 |
| YP_002242006.1 | NC_011291_p23 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 23116 | 23517 |
| YP_002242052.1 | NC_011291_p69 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 44086 | 44514 |
| YP_002241991.1 | NC_011291_p8 | hypothetical protein | phrog_9538 | head-tail connector protein | connector | 1 | 6729 | 7007 |
| YP_002241994.1 | NC_011291_p11 | hypothetical protein | phrog_2325 | minor tail protein | tail | 1 | 7922 | 8362 |
| YP_002241987.1 | NC_011291_p4 | portal | phrog_12 | portal protein | head and packaging | 1 | 2289 | 3710 |
| YP_002242013.1 | NC_011291_p30 | LysB | phrog_102 | endolysin | lysis | 1 | 26243 | 27409 |
| YP_002242007.1 | NC_011291_p24 | hypothetical protein | phrog_8501 | minor tail protein | tail | 1 | 23533 | 23931 |
| YP_002242047.1 | NC_011291_p64 | hypothetical protein | phrog_3599 | unknown function | unknown function | 1 | 41657 | 42181 |
| YP_002242021.1 | NC_011291_p38 | hypothetical protein | phrog_5015 | unknown function | unknown function | 1 | 30937 | 31458 |
| YP_002242001.1 | NC_011291_p18 | hypothetical protein | phrog_6832 | unknown function | unknown function | 1 | 16328 | 16498 |
| YP_002242000.1 | NC_011291_p17 | hypothetical protein | phrog_106 | minor tail protein | tail | 1 | 14601 | 16328 |
| YP_002242014.1 | NC_011291_p31 | hypothetical protein | phrog_6116 | holin | lysis | 1 | 27423 | 27626 |
| YP_002242056.1 | NC_011291_p73 | hypothetical protein | phrog_1721 | galactosyl transferase | moron, auxiliary metabolic gene and host takeover | 1 | 45931 | 46629 |
| YP_002242032.1 | NC_011291_p49 | RecT | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 34787 | 35854 |
| YP_002242009.1 | NC_011291_p26 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 24189 | 24377 |
| YP_002242017.1 | NC_011291_p34 | hypothetical protein | phrog_2328 | transcriptional repressor | transcription regulation | -1 | 29082 | 29468 |
| YP_002242046.1 | NC_011291_p63 | hypothetical protein | phrog_1408 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 40794 | 41660 |
| YP_002242035.1 | NC_011291_p52 | hypothetical protein | phrog_15611 | unknown function | unknown function | 1 | 36520 | 36822 |
| YP_002242030.1 | NC_011291_p47 | hypothetical protein | phrog_4702 | unknown function | unknown function | 1 | 33628 | 33777 |
| YP_002242044.1 | NC_011291_p61 | hypothetical protein | phrog_14517 | unknown function | unknown function | 1 | 39754 | 40662 |
| YP_002242011.1 | NC_011291_p28 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 25093 | 25227 |
| YP_002242002.1 | NC_011291_p19 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 16495 | 18228 |
| YP_002242019.1 | NC_011291_p36 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 29775 | 30644 |
| YP_002242057.1 | NC_011291_p74 | hypothetical protein | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 46629 | 46919 |
| YP_002241999.1 | NC_011291_p16 | tapemeasure protein | phrog_2337 | tail length tape measure protein | tail | 1 | 10774 | 14604 |
| YP_002242041.1 | NC_011291_p58 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 38746 | 39180 |
| YP_002242031.1 | NC_011291_p48 | endonuclease | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism | 1 | 33774 | 34781 |
| YP_002242037.1 | NC_011291_p54 | hypothetical protein | phrog_35837 | unknown function | unknown function | 1 | 37230 | 37349 |
| YP_002242036.1 | NC_011291_p53 | RusA | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 36853 | 37233 |
| YP_002241996.1 | NC_011291_p13 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 8865 | 9665 |
| YP_002242025.1 | NC_011291_p42 | hypothetical protein | phrog_5803 | unknown function | unknown function | 1 | 32481 | 32750 |
| YP_002242043.1 | NC_011291_p60 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 39319 | 39651 |
| YP_002242051.1 | NC_011291_p68 | hypothetical protein | phrog_20391 | unknown function | unknown function | 1 | 43784 | 44089 |
| YP_002241997.1 | NC_011291_p14 | hypothetical protein | phrog_621 | tail assembly chaperone | tail | 1 | 9777 | 10271 |
| YP_002242048.1 | NC_011291_p65 | hypothetical protein | phrog_20896 | unknown function | unknown function | 1 | 42178 | 42474 |
| YP_002241989.1 | NC_011291_p6 | prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 4164 | 5108 |
| YP_002242053.1 | NC_011291_p70 | hypothetical protein | phrog_23534 | unknown function | unknown function | 1 | 44511 | 44762 |
| YP_002242016.1 | NC_011291_p33 | integrase | phrog_1 | integrase | integration and excision | -1 | 28055 | 28948 |
| YP_002242024.1 | NC_011291_p41 | hypothetical protein | phrog_4981 | unknown function | unknown function | 1 | 32206 | 32481 |
| YP_002242022.1 | NC_011291_p39 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 31520 | 31951 |
| YP_002242045.1 | NC_011291_p62 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 40659 | 40793 |
| YP_002241998.1 | NC_011291_p15 | hypothetical protein | phrog_25545 | unknown function | unknown function | 1 | 10393 | 10770 |
| YP_002242049.1 | NC_011291_p66 | peptidase | phrog_908 | unknown function | unknown function | 1 | 42486 | 43373 |
| YP_002241988.1 | NC_011291_p5 | hypothetical protein | phrog_21017 | unknown function | unknown function | 1 | 3710 | 4141 |
| YP_002241995.1 | NC_011291_p12 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 8355 | 8774 |
| YP_002242005.1 | NC_011291_p22 | hypothetical protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 21613 | 23103 |