Genomic map of Stx2-converting phage 1717 (NC_011357)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_011357
Definition
Stx2-converting phage 1717, complete prophage genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
62147
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
77
%GC
50.91
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_002274263.1 NC_011357_p52 phage terminase, small subunit phrog_641 terminase small subunit head and packaging 1 32950 33513
YP_002274215.1 NC_011357_p4 hypothetical protein phrog_3323 unknown function unknown function -1 3413 3547
YP_002274233.1 NC_011357_p22 hypothetical protein phrog_1331 unknown function unknown function 1 12498 12659
YP_002274236.1 NC_011357_p25 truncated transposase phrog_1013 transposase integration and excision 1 14947 15348
YP_002274268.1 NC_011357_p57 prophage portal protein phrog_1289 portal protein head and packaging 1 40060 41283
YP_002274288.1 NC_011357_p77 penicillin-binding protein 6b phrog_5304 peptidase other 1 60783 61955
YP_002274232.1 NC_011357_p21 CII protein phrog_191 CII-like transcriptional activator transcription regulation 1 12169 12465
YP_002274254.1 NC_011357_p43 hypothetical protein phrog_143 unknown function unknown function 1 26819 28756
YP_002274282.1 NC_011357_p71 outer membrane protein Lom precursor phrog_108 Lom outer membrane protein other 1 55326 55925
YP_002274222.1 NC_011357_p11 Bet recombination protein phrog_252 Bet-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 6637 7422
YP_002274285.1 NC_011357_p74 hypothetical protein phrog_6583 T3SS secreted effector Ibe moron, auxiliary metabolic gene and host takeover 1 57985 58590
YP_002274277.1 NC_011357_p66 phage minor tail protein L phrog_18 minor tail protein tail 1 47839 48537
YP_002274226.1 NC_011357_p15 single-stranded DNA binding protein phrog_646 unknown function unknown function -1 8148 8516
YP_002274266.1 NC_011357_p55 phage head maturation protease phrog_617 major head protein head and packaging 1 36517 38487
YP_002274213.1 NC_011357_p2 hypothetical protein phrog_1229 unknown function unknown function -1 2312 2656
YP_002274257.1 NC_011357_p46 phage-related lysozyme phrog_7 endolysin lysis 1 29677 30174
YP_002274228.1 NC_011357_p17 N protein phrog_271 anti-termination protein N-like transcription regulation -1 9018 9362
YP_002274229.1 NC_011357_p18 hypothetical protein phrog_2602 unknown function unknown function -1 10019 10540
YP_002274231.1 NC_011357_p20 Cro protein phrog_3 transcriptional repressor transcription regulation 1 11812 12027
YP_002274250.1 NC_011357_p39 antiterminator Q protein phrog_943 anti-termination protein Q-like transcription regulation 1 23578 24066
YP_002274256.1 NC_011357_p45 holin protein S-like protein phrog_20 holin lysis 1 29462 29677
YP_002274286.1 NC_011357_p75 hypothetical protein phrog_808 unknown function unknown function -1 58815 59345
YP_002274265.1 NC_011357_p54 transposase phrog_151 transposase integration and excision -1 35070 35396
YP_002274240.1 NC_011357_p29 hypothetical protein phrog_1785 unknown function unknown function 1 18228 18443
YP_002274221.1 NC_011357_p10 exonuclease phrog_149 exonuclease DNA, RNA and nucleotide metabolism -1 5960 6640
YP_002274278.1 NC_011357_p67 phage antirepressor protein phrog_245 anti-repressor Ant transcription regulation 1 49227 50150
YP_002274241.1 NC_011357_p30 hypothetical protein phrog_343 unknown function unknown function 1 18445 18777
YP_002274245.1 NC_011357_p34 NinE protein phrog_288 unknown function unknown function 1 20296 20478
YP_002274284.1 NC_011357_p73 hypothetical protein phrog_576 tail fiber protein tail 1 57266 57574
YP_002274242.1 NC_011357_p31 hypothetical protein phrog_599 Lar-like restriction alleviation protein moron, auxiliary metabolic gene and host takeover 1 18947 19372
YP_002274253.1 NC_011357_p42 hypothetical protein phrog_4407 unknown function unknown function -1 26252 26575
YP_002274262.1 NC_011357_p51 restriction endonuclease phrog_589 HNH endonuclease DNA, RNA and nucleotide metabolism 1 32293 32658
YP_002274270.1 NC_011357_p59 bacteriophage head-tail adaptor phrog_25 head closure Hc1 connector 1 41616 41966
YP_002274224.1 NC_011357_p13 Kil protein phrog_2461 Kil protein for bacterial septation inhibition other -1 7799 8068
YP_002274259.1 NC_011357_p48 hypothetical protein phrog_129 transcriptional regulator transcription regulation 1 30811 31308
YP_002274255.1 NC_011357_p44 hypothetical protein phrog_8301 unknown function unknown function 1 28939 29385
YP_002274237.1 NC_011357_p26 transposase phrog_623 transposase integration and excision 1 15345 15692
YP_002274280.1 NC_011357_p69 tail component phrog_32 tail assembly protein tail 1 50840 51520
YP_002274223.1 NC_011357_p12 Gam phrog_259 gam-like host nuclease inhibitor moron, auxiliary metabolic gene and host takeover -1 7428 7844
YP_002274225.1 NC_011357_p14 regulatory protein cIII phrog_550 CIII anti-termination transcription regulation -1 7911 8075
YP_002274251.1 NC_011357_p40 verocytotoxin 2 variant 2c subunit A phrog_866 Shiga toxin subunit A moron, auxiliary metabolic gene and host takeover 1 24715 25674
YP_002274271.1 NC_011357_p60 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 41963 42409
YP_002274273.1 NC_011357_p62 tail assembly chaperone phrog_344 tail assembly chaperone tail 1 43530 43904
YP_002274216.1 NC_011357_p5 hypothetical protein phrog_631 unknown function unknown function -1 3544 4059
YP_002274244.1 NC_011357_p33 DNA N-6-adenine-methyltransferase of bacteriophage phrog_111 DNA methyltransferase other 1 19772 20299
YP_002274275.1 NC_011357_p64 tail tape measure protein phrog_339 tail length tape measure protein tail 1 44263 47505
YP_002274281.1 NC_011357_p70 tail fiber component J phrog_31 central tail fiber J tail 1 51780 55259
YP_002274246.1 NC_011357_p35 Ant antirepressor protein phrog_377 anti-repressor Ant transcription regulation 1 20753 21517
YP_002274214.1 NC_011357_p3 hypothetical protein phrog_924 unknown function unknown function -1 2844 3194
YP_002274243.1 NC_011357_p32 NinB protein phrog_72 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 19230 19775
YP_002274269.1 NC_011357_p58 hypothetical protein phrog_40 head-tail adaptor Ad1 connector 1 41280 41606
YP_002274283.1 NC_011357_p72 tail fiber protein phrog_366 tail fiber protein tail 1 55990 57303
YP_002274234.1 NC_011357_p23 bacteriophage DNA replication protein O phrog_345 replication initiation O-like DNA, RNA and nucleotide metabolism 1 12646 13467
YP_002274218.1 NC_011357_p7 DksA-like zinc finger domain containing protein phrog_54 DksA-like zinc-finger protein other -1 5005 5226
YP_002274239.1 NC_011357_p28 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 17369 17980
YP_002274261.1 NC_011357_p50 hypothetical protein singleton unknown function unknown function -1 32093 32251
YP_002274252.1 NC_011357_p41 verocytotoxin 2 variant 2c subunit B phrog_851 Shiga toxin subunit B moron, auxiliary metabolic gene and host takeover 1 25686 25955
YP_002274260.1 NC_011357_p49 hypothetical protein phrog_875 unknown function unknown function 1 31305 31562
YP_002274287.1 NC_011357_p76 hypothetical protein phrog_14889 unknown function unknown function -1 59450 59734
YP_002274230.1 NC_011357_p19 repressor phrog_4 transcriptional repressor transcription regulation -1 11042 11695
YP_002274227.1 NC_011357_p16 hypothetical protein phrog_2471 unknown function unknown function -1 8699 8959
YP_002274212.1 NC_011357_p1 integrase phrog_1 integrase integration and excision 1 884 2062
YP_002274219.1 NC_011357_p8 hypothetical protein phrog_303 unknown function unknown function -1 5325 5606
YP_002274220.1 NC_011357_p9 hypothetical protein phrog_292 unknown function unknown function -1 5617 5808
YP_002274274.1 NC_011357_p63 hypothetical protein phrog_337 tail protein tail 1 43928 44143
YP_002274217.1 NC_011357_p6 hypothetical protein phrog_250 unknown function unknown function -1 4061 5008
YP_002274272.1 NC_011357_p61 major tail subunit phrog_158 major tail protein tail 1 42679 43524
YP_002274238.1 NC_011357_p27 transposase phrog_688 transposase integration and excision 1 15742 17280
YP_002274264.1 NC_011357_p53 transposase OrfB phrog_157 transposase integration and excision -1 34183 35073
YP_002274247.1 NC_011357_p36 DNA-binding protein Roi of bacteriophage phrog_63 anti-repressor Ant transcription regulation 1 21586 22314
YP_002274248.1 NC_011357_p37 NinG protein phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 1 22314 22919
YP_002274267.1 NC_011357_p56 phage portal protein phrog_12 portal protein head and packaging 1 38699 40063
YP_002274276.1 NC_011357_p65 minor tail protein phrog_14 minor tail protein tail 1 47498 47839
YP_002274258.1 NC_011357_p47 Rz lysis protein phrog_13 Rz-like spanin lysis 1 30171 30608
YP_002274249.1 NC_011357_p38 NinI protein phrog_246 NinI-like serine-threonine phosphatase other 1 22916 23587
YP_002274235.1 NC_011357_p24 DnaB helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 13464 14840
YP_002274279.1 NC_011357_p68 tail component K-like protein phrog_30 minor tail protein tail 1 50204 50785