Genomic map of Pseudomonas phage PAJU2 (NC_011373)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_011373
Definition
Pseudomonas phage PAJU2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
46872
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
79
%GC
56.26
Number of singletons
6
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_002284339.1 NC_011373_p5 hypothetical protein phrog_4810 unknown function unknown function 1 4452 4670
YP_002284359.1 NC_011373_p25 hypothetical protein phrog_245 anti-repressor Ant transcription regulation -1 22971 23831
YP_002284336.1 NC_011373_p2 terminase phrog_9 terminase large subunit head and packaging 1 455 1972
YP_002284381.1 NC_011373_p47 exonuclease phrog_149 exonuclease DNA, RNA and nucleotide metabolism -1 32424 33050
YP_002284396.1 NC_011373_p62 hypothetical protein phrog_5333 unknown function unknown function 1 39959 40138
YP_002284354.1 NC_011373_p20 hypothetical protein phrog_396 minor tail protein tail 1 15143 15631
YP_002284344.1 NC_011373_p10 structural protein phrog_4603 alpha-2;3-sialyltransferase other 1 7780 8349
YP_002284342.1 NC_011373_p8 hypothetical protein phrog_40 head-tail adaptor Ad1 connector 1 7055 7429
YP_002284358.1 NC_011373_p24 acetyl transferase phrog_6705 O-antigen acetylase moron, auxiliary metabolic gene and host takeover -1 20915 22864
YP_002284384.1 NC_011373_p50 hypothetical protein phrog_5864 unknown function unknown function -1 35060 35197
YP_002284366.1 NC_011373_p32 hypothetical protein phrog_6355 unknown function unknown function -1 27499 27744
YP_002284343.1 NC_011373_p9 head-tail adaptor phrog_25 head closure Hc1 connector 1 7439 7780
YP_002284367.1 NC_011373_p33 hypothetical protein phrog_8538 unknown function unknown function -1 27847 28302
YP_002284347.1 NC_011373_p13 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 9716 10162
YP_002284377.1 NC_011373_p43 hypothetical protein singleton unknown function unknown function -1 30934 31713
YP_002284370.1 NC_011373_p36 hypothetical protein singleton unknown function unknown function -1 28707 28919
YP_002284371.1 NC_011373_p37 hypothetical protein phrog_24508 unknown function unknown function -1 28916 29152
YP_002284351.1 NC_011373_p17 hypothetical protein singleton unknown function unknown function 1 11665 11901
YP_002284374.1 NC_011373_p40 hypothetical protein phrog_5614 unknown function unknown function -1 29657 30139
YP_002284362.1 NC_011373_p28 hypothetical protein phrog_3774 unknown function unknown function 1 25302 25670
YP_002284341.1 NC_011373_p7 hypothetical protein phrog_1289 portal protein head and packaging 1 6054 7058
YP_002284373.1 NC_011373_p39 hypothetical protein phrog_343 unknown function unknown function -1 29410 29664
YP_002284385.1 NC_011373_p51 hypothetical protein phrog_23101 unknown function unknown function -1 35194 35553
YP_002284356.1 NC_011373_p22 hypothetical protein phrog_469 tail protein tail 1 16015 18744
YP_002284340.1 NC_011373_p6 portal protein phrog_12 portal protein head and packaging 1 4663 6057
YP_002284382.1 NC_011373_p48 ssDNA annealing protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 33054 33815
YP_002284365.1 NC_011373_p31 integrase phrog_1 integrase integration and excision 1 26657 27502
YP_002284395.1 NC_011373_p61 hypothetical protein phrog_4113 unknown function unknown function 1 39752 39940
YP_002284355.1 NC_011373_p21 hypothetical protein phrog_329 minor tail protein tail 1 15636 16043
YP_002284401.1 NC_011373_p67 hypothetical protein phrog_13309 unknown function unknown function 1 41940 42155
YP_002284386.1 NC_011373_p52 hypothetical protein phrog_13871 unknown function unknown function -1 35660 36040
YP_002284378.1 NC_011373_p44 hypothetical protein phrog_16171 unknown function unknown function -1 31710 31880
YP_002284361.1 NC_011373_p27 endolysin phrog_7 endolysin lysis 1 24871 25305
YP_002284413.1 NC_011373_p79 hypothetical protein phrog_32159 unknown function unknown function 1 46571 46762
YP_002284390.1 NC_011373_p56 hypothetical protein phrog_1273 unknown function unknown function -1 37589 37933
YP_002284380.1 NC_011373_p46 hypothetical protein phrog_22237 unknown function unknown function -1 32089 32427
YP_002284409.1 NC_011373_p75 hypothetical protein phrog_21424 unknown function unknown function 1 45319 45495
YP_002284387.1 NC_011373_p53 hypothetical protein phrog_3483 unknown function unknown function -1 36037 36552
YP_002284375.1 NC_011373_p41 hypothetical protein phrog_5315 unknown function unknown function -1 30136 30282
YP_002284402.1 NC_011373_p68 NinB phrog_72 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 42148 42564
YP_002284394.1 NC_011373_p60 repressor Cro phrog_9425 transcriptional repressor transcription regulation 1 39517 39738
YP_002284363.1 NC_011373_p29 hypothetical protein phrog_3580 unknown function unknown function 1 25667 25930
YP_002284335.1 NC_011373_p1 hypothetical protein phrog_12559 terminase small subunit head and packaging 1 51 476
YP_002284399.1 NC_011373_p65 hypothetical protein phrog_17140 unknown function unknown function 1 41675 41827
YP_002284405.1 NC_011373_p71 NinG phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 1 43141 43722
YP_002284406.1 NC_011373_p72 antitermination protein Q phrog_79 anti-termination protein Q-like transcription regulation 1 43719 44093
YP_002284376.1 NC_011373_p42 hypothetical protein phrog_3230 unknown function unknown function -1 30459 30953
YP_002284388.1 NC_011373_p54 hypothetical protein phrog_4801 unknown function unknown function -1 36549 36914
YP_002284345.1 NC_011373_p11 hypothetical protein phrog_6804 unknown function unknown function 1 8331 9158
YP_002284337.1 NC_011373_p3 structural protein phrog_617 major head protein head and packaging 1 2032 4035
YP_002284368.1 NC_011373_p34 hypothetical protein phrog_34960 unknown function unknown function -1 28283 28477
YP_002284397.1 NC_011373_p63 replication protein O phrog_678 replication initiation O-like DNA, RNA and nucleotide metabolism 1 40219 41028
YP_002284400.1 NC_011373_p66 hypothetical protein phrog_8532 unknown function unknown function 1 41824 41943
YP_002284404.1 NC_011373_p70 hypothetical protein phrog_19775 unknown function unknown function 1 42830 43147
YP_002284338.1 NC_011373_p4 hypothetical protein singleton unknown function unknown function 1 4098 4442
YP_002284352.1 NC_011373_p18 tape measure protein phrog_24 tail length tape measure protein tail 1 11932 14685
YP_002284383.1 NC_011373_p49 hypothetical protein phrog_1376 unknown function unknown function -1 33823 34887
YP_002284407.1 NC_011373_p73 hypothetical protein phrog_1024 unknown function unknown function 1 44514 44906
YP_002284412.1 NC_011373_p78 endonuclease phrog_2323 HNH endonuclease DNA, RNA and nucleotide metabolism 1 46165 46560
YP_002284372.1 NC_011373_p38 hypothetical protein phrog_21008 unknown function unknown function -1 29149 29409
YP_002284364.1 NC_011373_p30 hypothetical protein phrog_3944 unknown function unknown function 1 25966 26229
YP_002284360.1 NC_011373_p26 hypothetical protein phrog_2320 unknown function unknown function 1 24107 24541
YP_002284408.1 NC_011373_p74 endolysin phrog_938 endolysin lysis 1 44903 45319
YP_002284391.1 NC_011373_p57 hypothetical protein phrog_924 unknown function unknown function -1 37950 38159
YP_002284348.1 NC_011373_p14 hypothetical protein phrog_78 tail terminator connector 1 10162 10533
YP_002284393.1 NC_011373_p59 repressor cI phrog_4 transcriptional repressor transcription regulation -1 38733 39437
YP_002284350.1 NC_011373_p16 hypothetical protein phrog_1749 tail assembly chaperone tail 1 11225 11587
YP_002284411.1 NC_011373_p77 hypothetical protein phrog_2612 unknown function unknown function 1 45998 46168
YP_002284392.1 NC_011373_p58 hypothetical protein singleton unknown function unknown function -1 38168 38230
YP_002284346.1 NC_011373_p12 hypothetical protein phrog_6564 methyltransferase other 1 9109 9723
YP_002284369.1 NC_011373_p35 hypothetical protein phrog_2201 unknown function unknown function -1 28477 28707
YP_002284349.1 NC_011373_p15 structural protein phrog_158 major tail protein tail 1 10721 11215
YP_002284353.1 NC_011373_p19 hypothetical protein phrog_384 virion structural protein head and packaging 1 14682 15146
YP_002284398.1 NC_011373_p64 replication protein P phrog_109 P-like helicase loader DNA, RNA and nucleotide metabolism 1 41028 41678
YP_002284379.1 NC_011373_p45 hypothetical protein phrog_6604 unknown function unknown function -1 31852 32055
YP_002284357.1 NC_011373_p23 structural protein phrog_34100 tail protein tail 1 18803 20881
YP_002284410.1 NC_011373_p76 hypothetical protein phrog_4952 signal peptide motif other 1 45488 45841
YP_002284403.1 NC_011373_p69 hypothetical protein phrog_2529 unknown function unknown function 1 42561 42833
YP_002284389.1 NC_011373_p55 hypothetical protein singleton unknown function unknown function -1 36911 37114