| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_011534 |
Definition |
Kluyvera phage Kvp1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Berlinvirus. |
DB of origin |
REFSEQ |
Length |
39472 |
Host Name |
Kluyvera cryocrescens |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
47 |
%GC |
48.64 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_002308409.1 | NC_011534_p28 | virion protein ejected into cell | phrog_1320 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 18411 | 18764 |
| YP_002308414.1 | NC_011534_p33 | tail tubular protein A | phrog_446 | tail protein | tail | 1 | 22767 | 23357 |
| YP_002308388.1 | NC_011534_p7 | hypothetical protein | phrog_2490 | unknown function | unknown function | 1 | 6450 | 6599 |
| YP_002308421.1 | NC_011534_p40 | phage tail fiber assembly protein | phrog_136 | tail fiber assembly protein | tail | 1 | 34987 | 35511 |
| YP_002308383.1 | NC_011534_p2 | hypothetical protein | phrog_2385 | unknown function | unknown function | 1 | 1464 | 1661 |
| YP_002308385.1 | NC_011534_p4 | protein kinase | phrog_2828 | serine-threonine kinase | other | 1 | 1877 | 2980 |
| YP_002308405.1 | NC_011534_p24 | host recBCD nuclease inhibitor | phrog_4790 | host RecBCD nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 16591 | 16770 |
| YP_002308426.1 | NC_011534_p45 | DNA packaging protein B | phrog_38 | terminase large subunit | head and packaging | 1 | 36870 | 38627 |
| YP_002308418.1 | NC_011534_p37 | internal virion protein C | phrog_1339 | internal virion protein | head and packaging | 1 | 26876 | 29155 |
| YP_002308410.1 | NC_011534_p29 | head-to-tail joining protein | phrog_449 | head-tail adaptor | connector | 1 | 18777 | 20384 |
| YP_002308423.1 | NC_011534_p42 | DNA packaging protein, small subunit | phrog_1351 | terminase small subunit | head and packaging | 1 | 35748 | 36017 |
| YP_002308393.1 | NC_011534_p12 | hypothetical protein | phrog_2585 | nucleotide kinase | other | 1 | 8442 | 8807 |
| YP_002308419.1 | NC_011534_p38 | internal virion protein D | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 29179 | 33126 |
| YP_002308387.1 | NC_011534_p6 | hypothetical protein | phrog_8103 | unknown function | unknown function | 1 | 5793 | 6350 |
| YP_002308386.1 | NC_011534_p5 | T3/T7-like RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 3053 | 5701 |
| YP_002308404.1 | NC_011534_p23 | hypothetical protein | phrog_1334 | unknown function | unknown function | 1 | 16385 | 16594 |
| YP_002308391.1 | NC_011534_p10 | hypothetical protein | phrog_10145 | unknown function | unknown function | 1 | 8071 | 8151 |
| YP_002308399.1 | NC_011534_p18 | probable HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 12690 | 13133 |
| YP_002308384.1 | NC_011534_p3 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1645 | 1863 |
| YP_002308412.1 | NC_011534_p31 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 21500 | 22677 |
| YP_002308406.1 | NC_011534_p25 | exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 16767 | 17681 |
| YP_002308402.1 | NC_011534_p21 | hypothetical protein | phrog_5018 | unknown function | unknown function | 1 | 15718 | 16098 |
| YP_002308411.1 | NC_011534_p30 | capsid assembly protein | phrog_1052 | head assembly | head and packaging | 1 | 20461 | 21372 |
| YP_002308400.1 | NC_011534_p19 | hypothetical protein | phrog_4023 | unknown function | unknown function | 1 | 13158 | 13574 |
| YP_002308420.1 | NC_011534_p39 | tail fiber protein | phrog_4242 | tail fiber protein | tail | 1 | 33194 | 34966 |
| YP_002308397.1 | NC_011534_p16 | lysozyme | phrog_822 | amidase | lysis | 1 | 10297 | 10752 |
| YP_002308407.1 | NC_011534_p26 | hypothetical protein | phrog_1447 | unknown function | unknown function | 1 | 17850 | 18098 |
| YP_002308401.1 | NC_011534_p20 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 13587 | 15701 |
| YP_002308422.1 | NC_011534_p41 | type II holin | phrog_920 | holin | lysis | 1 | 35549 | 35755 |
| YP_002308403.1 | NC_011534_p22 | hypothetical protein | phrog_1452 | Gp5.5-like host HNS inhibition | moron, auxiliary metabolic gene and host takeover | 1 | 16101 | 16385 |
| YP_002308416.1 | NC_011534_p35 | internal virion protein A | phrog_308 | internal virion protein | head and packaging | 1 | 25837 | 26250 |
| YP_002308408.1 | NC_011534_p27 | hypothetical protein | phrog_1391 | unknown function | unknown function | 1 | 18115 | 18396 |
| YP_002308382.1 | NC_011534_p1 | S-adenosyl-L-methionine hydrolase | phrog_2226 | SAM-dependent methyltransferase | other | 1 | 1004 | 1462 |
| YP_002308396.1 | NC_011534_p15 | endonuclease I | phrog_945 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 9854 | 10300 |
| YP_002308394.1 | NC_011534_p13 | inhibitor of host bacterial RNA polymerase | phrog_1307 | RNA polymerase inhibitor | DNA, RNA and nucleotide metabolism | 1 | 8895 | 9086 |
| YP_002308417.1 | NC_011534_p36 | internal virion protein B | phrog_805 | internal virion protein | head and packaging | 1 | 26253 | 26858 |
| YP_002308415.1 | NC_011534_p34 | tubular tail protein B | phrog_457 | tail protein | tail | 1 | 23377 | 25758 |
| YP_002308395.1 | NC_011534_p14 | single-stranded DNA-binding protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 9156 | 9854 |
| YP_002308428.1 | NC_011534_p47 | hypothetical protein | phrog_2193 | unknown function | unknown function | 1 | 38895 | 39050 |
| YP_002308392.1 | NC_011534_p11 | hypothetical protein | phrog_1777 | unknown function | unknown function | 1 | 8179 | 8442 |
| YP_002308427.1 | NC_011534_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38821 | 38940 |
| YP_002308424.1 | NC_011534_p43 | hypothetical protein | phrog_2914 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 36075 | 36410 |
| YP_002308398.1 | NC_011534_p17 | DNA primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 11015 | 12724 |
| YP_002308425.1 | NC_011534_p44 | phage lambda Rz-like lysis protein | phrog_1327 | Rz-like spanin | lysis | 1 | 36429 | 36860 |
| YP_002308390.1 | NC_011534_p9 | ATP-dependent DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 6975 | 7997 |
| YP_002308413.1 | NC_011534_p32 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 21500 | 22543 |
| YP_002308389.1 | NC_011534_p8 | host dGTPase inhibitor | phrog_2949 | dGTPase inhibitor; target for F exclusion | other | 1 | 6599 | 6871 |