Genomic map of Pseudomonas virus MP38 (NC_011611)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_011611
Definition
Pseudomonas phage MP38, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus.
DB of origin
REFSEQ
Length
36885
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
51
%GC
64.51
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_002332313.1 NC_011611_p1 c repressor phrog_4 transcriptional repressor transcription regulation -1 170 829
YP_002332323.1 NC_011611_p11 hypothetical protein phrog_2119 unknown function unknown function 1 6871 7284
YP_002332326.1 NC_011611_p14 hypothetical protein phrog_4367 unknown function unknown function 1 8377 8685
YP_002332324.1 NC_011611_p12 hypothetical protein phrog_2043 unknown function unknown function 1 7274 7558
YP_002332333.1 NC_011611_p21 hypothetical protein phrog_1024 unknown function unknown function 1 11051 11497
YP_002332331.1 NC_011611_p19 integral membrane protein phrog_836 late transcriptional activator transcription regulation 1 10206 10655
YP_002332315.1 NC_011611_p3 hypothetical protein phrog_2345 transcriptional regulator transcription regulation 1 1429 1863
YP_002332349.1 NC_011611_p37 hypothetical protein phrog_209 portal protein head and packaging 1 22213 22686
YP_002332342.1 NC_011611_p30 virion morphogenesis protein phrog_220 minor head protein and DNA pilot head and packaging 1 17158 18444
YP_002332340.1 NC_011611_p28 hypothetical protein phrog_38 terminase large subunit head and packaging 1 13916 15568
YP_002332351.1 NC_011611_p39 hypothetical protein phrog_807 major tail protein with Ig-like domain tail 1 22886 23656
YP_002332325.1 NC_011611_p13 host nuclease inhibitor protein phrog_18351 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 7575 8375
YP_002332316.1 NC_011611_p4 hypothetical protein phrog_8647 unknown function unknown function 1 1863 2189
YP_002332320.1 NC_011611_p8 hypothetical protein phrog_2030 transcriptional regulator transcription regulation 1 5422 6087
YP_002332335.1 NC_011611_p23 hypothetical protein phrog_4057 unknown function unknown function 1 11936 12178
YP_002332314.1 NC_011611_p2 Ner-like protein phrog_769 transcriptional repressor transcription regulation 1 1070 1426
YP_002332361.1 NC_011611_p49 hypothetical protein phrog_1101 tail protein tail 1 32860 35067
YP_002332337.1 NC_011611_p25 hypothetical protein phrog_1103 unknown function unknown function 1 12687 12875
YP_002332328.1 NC_011611_p16 hypothetical protein phrog_3652 unknown function unknown function 1 9179 9448
YP_002332345.1 NC_011611_p33 hypothetical protein phrog_371 major head protein head and packaging 1 20215 21129
YP_002332348.1 NC_011611_p36 hypothetical protein phrog_195 head-tail adaptor connector 1 21800 22216
YP_002332338.1 NC_011611_p26 hypothetical protein phrog_756 DNA binding protein DNA, RNA and nucleotide metabolism 1 12884 13384
YP_002332317.1 NC_011611_p5 hypothetical protein phrog_4468 unknown function unknown function 1 2186 2596
YP_002332322.1 NC_011611_p10 hypothetical protein phrog_3765 unknown function unknown function 1 6755 6871
YP_002332319.1 NC_011611_p7 DNA transposition protein phrog_296 DNA transposition protein integration and excision 1 4655 5425
YP_002332344.1 NC_011611_p32 protease (I) and scaffold (Z) protein phrog_328 head maturation protease head and packaging 1 19240 20211
YP_002332352.1 NC_011611_p40 hypothetical protein gpGT phrog_1442 tail assembly chaperone tail 1 23661 24304
YP_002332332.1 NC_011611_p20 hypothetical protein phrog_3648 unknown function unknown function 1 10759 11106
YP_002332363.1 NC_011611_p51 hypothetical protein phrog_2432 unknown function unknown function 1 36209 36496
YP_002332330.1 NC_011611_p18 hypothetical protein phrog_286 unknown function unknown function 1 9812 10219
YP_002332336.1 NC_011611_p24 hypothetical protein phrog_2975 Rz-like spanin lysis 1 12175 12576
YP_002332353.1 NC_011611_p41 hypothetical protein gpG phrog_1442 tail assembly chaperone tail 1 23661 24179
YP_002332362.1 NC_011611_p50 hypothetical protein phrog_2875 virion structural protein head and packaging 1 35064 36212
YP_002332358.1 NC_011611_p46 hypothetical protein phrog_778 tail assembly protein tail 1 31631 32407
YP_002332329.1 NC_011611_p17 hypothetical protein phrog_14676 unknown function unknown function 1 9633 9815
YP_002332360.1 NC_011611_p48 hypothetical protein phrog_1196 tail assembly chaperone tail 1 32652 32870
YP_002332346.1 NC_011611_p34 hypothetical protein phrog_4833 unknown function unknown function 1 21196 21636
YP_002332356.1 NC_011611_p44 hypothetical protein phrog_687 structural protein head and packaging 1 28970 29893
YP_002332354.1 NC_011611_p42 tail component protein phrog_2335 tail length tape measure protein tail 1 24306 28004
YP_002332339.1 NC_011611_p27 hypothetical protein phrog_1244 unknown function unknown function -1 13390 13917
YP_002332350.1 NC_011611_p38 hypothetical protein phrog_3129 unknown function unknown function 1 22674 22853
YP_002332347.1 NC_011611_p35 hypothetical protein phrog_3376 unknown function unknown function 1 21636 21803
YP_002332357.1 NC_011611_p45 hypothetical protein phrog_1082 tail assembly protein tail 1 29893 31596
YP_002332318.1 NC_011611_p6 transposase A phrog_310 transposase integration and excision 1 2589 4658
YP_002332341.1 NC_011611_p29 portal protein phrog_113 portal protein head and packaging 1 15578 17158
YP_002332327.1 NC_011611_p15 hypothetical protein phrog_12417 unknown function unknown function 1 8688 9176
YP_002332321.1 NC_011611_p9 hypothetical protein phrog_3190 unknown function unknown function 1 6159 6734
YP_002332343.1 NC_011611_p31 virion morphogenesis protein phrog_26 tail completion or Neck1 protein connector 1 18444 18911
YP_002332359.1 NC_011611_p47 hypothetical protein phrog_1180 tail assembly chaperone tail 1 32416 32655
YP_002332334.1 NC_011611_p22 virion protein phrog_873 endolysin head and packaging 1 11520 11936
YP_002332355.1 NC_011611_p43 hypothetical protein phrog_687 structural protein head and packaging 1 28012 28968