Genomic map of Pseudomonas virus MP29 (NC_011613)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_011613
Definition
Pseudomonas phage MP29, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus.
DB of origin
REFSEQ
Length
36632
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
51
%GC
64.32
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_002332447.1 NC_011613_p22 hypothetical protein phrog_2975 Rz-like spanin lysis 1 11533 11934
YP_002332438.1 NC_011613_p13 hypothetical protein phrog_4367 unknown function unknown function 1 7735 8043
YP_002332456.1 NC_011613_p31 protease (I) and scaffold (Z) protein phrog_328 head maturation protease head and packaging 1 18828 19808
YP_002332464.1 NC_011613_p39 hypothetical protein phrog_807 major tail protein with Ig-like domain tail 1 22794 23564
YP_002332446.1 NC_011613_p21 virion protein phrog_873 endolysin head and packaging 1 10878 11294
YP_002332467.1 NC_011613_p42 tail component protein phrog_24 tail length tape measure protein tail 1 24184 27741
YP_002332450.1 NC_011613_p25 hypothetical protein phrog_38 terminase large subunit head and packaging 1 12739 14514
YP_002332448.1 NC_011613_p23 hypothetical protein phrog_1103 unknown function unknown function 1 12045 12233
YP_002332461.1 NC_011613_p36 hypothetical protein phrog_195 head-tail adaptor connector 1 21702 22118
YP_002332466.1 NC_011613_p41 hypothetical protein gpG phrog_1442 tail assembly chaperone tail 1 23568 24053
YP_002332432.1 NC_011613_p7 DNA transposition protein phrog_296 DNA transposition protein integration and excision 1 4618 5388
YP_002332470.1 NC_011613_p45 hypothetical protein phrog_1082 tail assembly protein tail 1 29630 31333
YP_002332443.1 NC_011613_p18 integral membrane protein phrog_836 late transcriptional activator transcription regulation 1 9564 10013
YP_002332429.1 NC_011613_p4 hypothetical protein phrog_8647 unknown function unknown function 1 1823 2149
YP_002332452.1 NC_011613_p27 virion morphogenesis protein phrog_220 minor head protein and DNA pilot head and packaging 1 16112 17398
YP_002332440.1 NC_011613_p15 hypothetical protein phrog_3652 unknown function unknown function 1 8537 8806
YP_002332434.1 NC_011613_p9 hypothetical protein phrog_3765 unknown function unknown function 1 6017 6133
YP_002332468.1 NC_011613_p43 hypothetical protein phrog_687 structural protein head and packaging 1 27749 28705
YP_002332474.1 NC_011613_p49 hypothetical protein phrog_1101 tail protein tail 1 32597 34804
YP_002332475.1 NC_011613_p50 hypothetical protein phrog_2875 virion structural protein head and packaging 1 34801 35952
YP_002332465.1 NC_011613_p40 hypothetical protein gpGT phrog_1442 tail assembly chaperone tail 1 23568 24181
YP_002332445.1 NC_011613_p20 hypothetical protein phrog_1024 unknown function unknown function 1 10408 10878
YP_002332453.1 NC_011613_p28 virion morphogenesis protein phrog_26 tail completion or Neck1 protein connector 1 17398 17865
YP_002332462.1 NC_011613_p37 hypothetical protein phrog_209 portal protein head and packaging 1 22115 22594
YP_002332436.1 NC_011613_p11 hypothetical protein phrog_2043 unknown function unknown function 1 6536 6820
YP_002332431.1 NC_011613_p6 transposase A phrog_310 transposase integration and excision 1 2549 4621
YP_002332476.1 NC_011613_p51 hypothetical protein phrog_2432 unknown function unknown function 1 35949 36242
YP_002332457.1 NC_011613_p32 hypothetical protein phrog_1731 virion structural protein head and packaging 1 19818 20216
YP_002332451.1 NC_011613_p26 portal protein phrog_113 portal protein head and packaging 1 14526 16112
YP_002332454.1 NC_011613_p29 hypothetical protein phrog_19304 unknown function unknown function 1 17996 18271
YP_002332455.1 NC_011613_p30 hypothetical protein phrog_18309 unknown function unknown function 1 18378 18482
YP_002332433.1 NC_011613_p8 hypothetical protein phrog_2030 transcriptional regulator transcription regulation 1 5385 6032
YP_002332428.1 NC_011613_p3 hypothetical protein phrog_2345 transcriptional regulator transcription regulation 1 1389 1823
YP_002332437.1 NC_011613_p12 host nuclease inhibitor protein phrog_18351 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 6837 7733
YP_002332471.1 NC_011613_p46 hypothetical protein phrog_778 tail assembly protein tail 1 31368 32144
YP_002332469.1 NC_011613_p44 hypothetical protein phrog_687 structural protein head and packaging 1 28707 29630
YP_002332460.1 NC_011613_p35 hypothetical protein phrog_3376 unknown function unknown function 1 21529 21705
YP_002332430.1 NC_011613_p5 hypothetical protein phrog_4468 unknown function unknown function 1 2146 2556
YP_002332458.1 NC_011613_p33 hypothetical protein phrog_371 major head protein head and packaging 1 20244 21152
YP_002332442.1 NC_011613_p17 hypothetical protein phrog_286 unknown function unknown function 1 9170 9577
YP_002332435.1 NC_011613_p10 hypothetical protein phrog_2119 unknown function unknown function 1 6133 6546
YP_002332472.1 NC_011613_p47 hypothetical protein phrog_1180 tail assembly chaperone tail 1 32153 32392
YP_002332427.1 NC_011613_p2 Ner-like protein phrog_769 transcriptional repressor transcription regulation 1 1042 1386
YP_002332459.1 NC_011613_p34 hypothetical protein phrog_7976 unknown function unknown function 1 21164 21466
YP_002332449.1 NC_011613_p24 hypothetical protein phrog_756 DNA binding protein DNA, RNA and nucleotide metabolism 1 12242 12742
YP_002332463.1 NC_011613_p38 hypothetical protein phrog_3129 unknown function unknown function 1 22582 22761
YP_002332441.1 NC_011613_p16 hypothetical protein phrog_14676 unknown function unknown function 1 8991 9173
YP_002332439.1 NC_011613_p14 hypothetical protein phrog_12417 unknown function unknown function 1 8046 8534
YP_002332444.1 NC_011613_p19 hypothetical protein phrog_3648 unknown function unknown function 1 10116 10463
YP_002332426.1 NC_011613_p1 c repressor phrog_4 transcriptional repressor transcription regulation -1 170 892
YP_002332473.1 NC_011613_p48 hypothetical protein phrog_1196 tail assembly chaperone tail 1 32389 32607