| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_011613 |
Definition |
Pseudomonas phage MP29, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus. |
DB of origin |
REFSEQ |
Length |
36632 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
51 |
%GC |
64.32 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_002332447.1 | NC_011613_p22 | hypothetical protein | phrog_2975 | Rz-like spanin | lysis | 1 | 11533 | 11934 |
| YP_002332438.1 | NC_011613_p13 | hypothetical protein | phrog_4367 | unknown function | unknown function | 1 | 7735 | 8043 |
| YP_002332456.1 | NC_011613_p31 | protease (I) and scaffold (Z) protein | phrog_328 | head maturation protease | head and packaging | 1 | 18828 | 19808 |
| YP_002332464.1 | NC_011613_p39 | hypothetical protein | phrog_807 | major tail protein with Ig-like domain | tail | 1 | 22794 | 23564 |
| YP_002332446.1 | NC_011613_p21 | virion protein | phrog_873 | endolysin | head and packaging | 1 | 10878 | 11294 |
| YP_002332467.1 | NC_011613_p42 | tail component protein | phrog_24 | tail length tape measure protein | tail | 1 | 24184 | 27741 |
| YP_002332450.1 | NC_011613_p25 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | 1 | 12739 | 14514 |
| YP_002332448.1 | NC_011613_p23 | hypothetical protein | phrog_1103 | unknown function | unknown function | 1 | 12045 | 12233 |
| YP_002332461.1 | NC_011613_p36 | hypothetical protein | phrog_195 | head-tail adaptor | connector | 1 | 21702 | 22118 |
| YP_002332466.1 | NC_011613_p41 | hypothetical protein gpG | phrog_1442 | tail assembly chaperone | tail | 1 | 23568 | 24053 |
| YP_002332432.1 | NC_011613_p7 | DNA transposition protein | phrog_296 | DNA transposition protein | integration and excision | 1 | 4618 | 5388 |
| YP_002332470.1 | NC_011613_p45 | hypothetical protein | phrog_1082 | tail assembly protein | tail | 1 | 29630 | 31333 |
| YP_002332443.1 | NC_011613_p18 | integral membrane protein | phrog_836 | late transcriptional activator | transcription regulation | 1 | 9564 | 10013 |
| YP_002332429.1 | NC_011613_p4 | hypothetical protein | phrog_8647 | unknown function | unknown function | 1 | 1823 | 2149 |
| YP_002332452.1 | NC_011613_p27 | virion morphogenesis protein | phrog_220 | minor head protein and DNA pilot | head and packaging | 1 | 16112 | 17398 |
| YP_002332440.1 | NC_011613_p15 | hypothetical protein | phrog_3652 | unknown function | unknown function | 1 | 8537 | 8806 |
| YP_002332434.1 | NC_011613_p9 | hypothetical protein | phrog_3765 | unknown function | unknown function | 1 | 6017 | 6133 |
| YP_002332468.1 | NC_011613_p43 | hypothetical protein | phrog_687 | structural protein | head and packaging | 1 | 27749 | 28705 |
| YP_002332474.1 | NC_011613_p49 | hypothetical protein | phrog_1101 | tail protein | tail | 1 | 32597 | 34804 |
| YP_002332475.1 | NC_011613_p50 | hypothetical protein | phrog_2875 | virion structural protein | head and packaging | 1 | 34801 | 35952 |
| YP_002332465.1 | NC_011613_p40 | hypothetical protein gpGT | phrog_1442 | tail assembly chaperone | tail | 1 | 23568 | 24181 |
| YP_002332445.1 | NC_011613_p20 | hypothetical protein | phrog_1024 | unknown function | unknown function | 1 | 10408 | 10878 |
| YP_002332453.1 | NC_011613_p28 | virion morphogenesis protein | phrog_26 | tail completion or Neck1 protein | connector | 1 | 17398 | 17865 |
| YP_002332462.1 | NC_011613_p37 | hypothetical protein | phrog_209 | portal protein | head and packaging | 1 | 22115 | 22594 |
| YP_002332436.1 | NC_011613_p11 | hypothetical protein | phrog_2043 | unknown function | unknown function | 1 | 6536 | 6820 |
| YP_002332431.1 | NC_011613_p6 | transposase A | phrog_310 | transposase | integration and excision | 1 | 2549 | 4621 |
| YP_002332476.1 | NC_011613_p51 | hypothetical protein | phrog_2432 | unknown function | unknown function | 1 | 35949 | 36242 |
| YP_002332457.1 | NC_011613_p32 | hypothetical protein | phrog_1731 | virion structural protein | head and packaging | 1 | 19818 | 20216 |
| YP_002332451.1 | NC_011613_p26 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 14526 | 16112 |
| YP_002332454.1 | NC_011613_p29 | hypothetical protein | phrog_19304 | unknown function | unknown function | 1 | 17996 | 18271 |
| YP_002332455.1 | NC_011613_p30 | hypothetical protein | phrog_18309 | unknown function | unknown function | 1 | 18378 | 18482 |
| YP_002332433.1 | NC_011613_p8 | hypothetical protein | phrog_2030 | transcriptional regulator | transcription regulation | 1 | 5385 | 6032 |
| YP_002332428.1 | NC_011613_p3 | hypothetical protein | phrog_2345 | transcriptional regulator | transcription regulation | 1 | 1389 | 1823 |
| YP_002332437.1 | NC_011613_p12 | host nuclease inhibitor protein | phrog_18351 | host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 6837 | 7733 |
| YP_002332471.1 | NC_011613_p46 | hypothetical protein | phrog_778 | tail assembly protein | tail | 1 | 31368 | 32144 |
| YP_002332469.1 | NC_011613_p44 | hypothetical protein | phrog_687 | structural protein | head and packaging | 1 | 28707 | 29630 |
| YP_002332460.1 | NC_011613_p35 | hypothetical protein | phrog_3376 | unknown function | unknown function | 1 | 21529 | 21705 |
| YP_002332430.1 | NC_011613_p5 | hypothetical protein | phrog_4468 | unknown function | unknown function | 1 | 2146 | 2556 |
| YP_002332458.1 | NC_011613_p33 | hypothetical protein | phrog_371 | major head protein | head and packaging | 1 | 20244 | 21152 |
| YP_002332442.1 | NC_011613_p17 | hypothetical protein | phrog_286 | unknown function | unknown function | 1 | 9170 | 9577 |
| YP_002332435.1 | NC_011613_p10 | hypothetical protein | phrog_2119 | unknown function | unknown function | 1 | 6133 | 6546 |
| YP_002332472.1 | NC_011613_p47 | hypothetical protein | phrog_1180 | tail assembly chaperone | tail | 1 | 32153 | 32392 |
| YP_002332427.1 | NC_011613_p2 | Ner-like protein | phrog_769 | transcriptional repressor | transcription regulation | 1 | 1042 | 1386 |
| YP_002332459.1 | NC_011613_p34 | hypothetical protein | phrog_7976 | unknown function | unknown function | 1 | 21164 | 21466 |
| YP_002332449.1 | NC_011613_p24 | hypothetical protein | phrog_756 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 12242 | 12742 |
| YP_002332463.1 | NC_011613_p38 | hypothetical protein | phrog_3129 | unknown function | unknown function | 1 | 22582 | 22761 |
| YP_002332441.1 | NC_011613_p16 | hypothetical protein | phrog_14676 | unknown function | unknown function | 1 | 8991 | 9173 |
| YP_002332439.1 | NC_011613_p14 | hypothetical protein | phrog_12417 | unknown function | unknown function | 1 | 8046 | 8534 |
| YP_002332444.1 | NC_011613_p19 | hypothetical protein | phrog_3648 | unknown function | unknown function | 1 | 10116 | 10463 |
| YP_002332426.1 | NC_011613_p1 | c repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 170 | 892 |
| YP_002332473.1 | NC_011613_p48 | hypothetical protein | phrog_1196 | tail assembly chaperone | tail | 1 | 32389 | 32607 |