functional categories (each PHROG annotation is associated to a category) | Notes | ||
head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
tail | lysis | other | - Scroll to zoom |
unknown function | - Click on a protein to see its PHROG |
Locus |
NC_011811 |
Definition |
Erwinia phage phiEa21-4, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Kolesnikvirus. |
DB of origin |
REFSEQ |
Length |
84576 |
Host Name |
Erwinia amylovora |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
118 |
%GC |
43.81 |
Number of singletons |
2 |
Number of paralogs |
1 |
NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
---|---|---|---|---|---|---|---|---|
YP_002456098.1 | NC_011811_p75 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 53705 | 54640 |
YP_002456025.1 | NC_011811_p2 | RIIB | phrog_609 | RIIB lysis inhibitor | lysis | 1 | 2503 | 3630 |
YP_002456131.1 | NC_011811_p108 | hypothetical protein | phrog_25847 | unknown function | unknown function | 1 | 78361 | 79470 |
YP_002456113.1 | NC_011811_p90 | HNH endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 64207 | 64683 |
YP_002456035.1 | NC_011811_p12 | hypothetical protein | phrog_1152 | Rz-like spanin | lysis | 1 | 7979 | 8335 |
YP_002456046.1 | NC_011811_p23 | hypothetical protein | phrog_1039 | immunity to superinfection | moron, auxiliary metabolic gene and host takeover | 1 | 12941 | 13174 |
YP_002456111.1 | NC_011811_p88 | hypothetical protein | phrog_26009 | unknown function | unknown function | -1 | 61159 | 61425 |
YP_002456130.1 | NC_011811_p107 | hypothetical protein | phrog_1774 | unknown function | unknown function | 1 | 77922 | 78197 |
YP_002456064.1 | NC_011811_p41 | hypothetical protein | phrog_36301 | unknown function | unknown function | -1 | 20810 | 20962 |
YP_002456054.1 | NC_011811_p31 | hypothetical protein | phrog_28568 | unknown function | unknown function | 1 | 16220 | 16471 |
YP_002456070.1 | NC_011811_p47 | hypothetical protein | phrog_113 | portal protein | head and packaging | 1 | 28216 | 29664 |
YP_002456132.1 | NC_011811_p109 | hypothetical protein | phrog_2652 | unknown function | unknown function | 1 | 79525 | 79785 |
YP_002456106.1 | NC_011811_p83 | hypothetical protein | phrog_5180 | unknown function | unknown function | -1 | 59873 | 60124 |
YP_002456049.1 | NC_011811_p26 | hypothetical protein | phrog_26669 | unknown function | unknown function | 1 | 14327 | 14560 |
YP_002456116.1 | NC_011811_p93 | hypothetical protein | phrog_23329 | unknown function | unknown function | 1 | 65928 | 66779 |
YP_002456097.1 | NC_011811_p74 | hypothetical protein | phrog_4038 | unknown function | unknown function | 1 | 53329 | 53664 |
YP_002456048.1 | NC_011811_p25 | hypothetical protein | phrog_35292 | unknown function | unknown function | 1 | 13928 | 14254 |
YP_002456117.1 | NC_011811_p94 | deoxynucleotide monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 66839 | 67825 |
YP_002456069.1 | NC_011811_p46 | terminase | phrog_979 | terminase large subunit | head and packaging | 1 | 26606 | 28210 |
YP_002456029.1 | NC_011811_p6 | Vs.1 conserved hypothetical protein | phrog_600 | unknown function | unknown function | 1 | 4760 | 5272 |
YP_002456123.1 | NC_011811_p100 | hypothetical protein | phrog_2144 | MazG-like pyrophosphatase | other | 1 | 72643 | 73389 |
YP_002456051.1 | NC_011811_p28 | hypothetical protein | phrog_4640 | unknown function | unknown function | 1 | 14926 | 15171 |
YP_002456115.1 | NC_011811_p92 | hypothetical protein | phrog_25891 | unknown function | unknown function | 1 | 65228 | 65935 |
YP_002456129.1 | NC_011811_p106 | hypothetical protein | phrog_23748 | unknown function | unknown function | 1 | 77701 | 77919 |
YP_002456057.1 | NC_011811_p34 | hypothetical protein | phrog_23652 | holin | lysis | -1 | 18104 | 18337 |
YP_002456136.1 | NC_011811_p113 | hypothetical protein | phrog_2993 | unknown function | unknown function | 1 | 80448 | 80744 |
YP_002456119.1 | NC_011811_p96 | hypothetical protein | phrog_3877 | unknown function | unknown function | 1 | 69834 | 70697 |
YP_002456041.1 | NC_011811_p18 | hypothetical protein | phrog_3436 | unknown function | unknown function | 1 | 11432 | 11713 |
YP_002456125.1 | NC_011811_p102 | hypothetical protein | phrog_3358 | unknown function | unknown function | 1 | 73636 | 73911 |
YP_002456058.1 | NC_011811_p35 | hypothetical protein | phrog_32274 | unknown function | unknown function | -1 | 18334 | 18495 |
YP_002456027.1 | NC_011811_p4 | T4 NrdA.1-like protein | phrog_24867 | ribonucleotide reductase NrdA-like | DNA, RNA and nucleotide metabolism | 1 | 3956 | 4519 |
YP_002456038.1 | NC_011811_p15 | hypothetical protein | phrog_26598 | unknown function | unknown function | 1 | 9724 | 10071 |
YP_002456100.1 | NC_011811_p77 | hypothetical protein | phrog_26976 | unknown function | unknown function | -1 | 55197 | 55751 |
YP_002456133.1 | NC_011811_p110 | hypothetical protein | phrog_31795 | unknown function | unknown function | 1 | 79712 | 79903 |
YP_002456042.1 | NC_011811_p19 | hypothetical protein | phrog_25466 | unknown function | unknown function | 1 | 11801 | 12217 |
YP_002456055.1 | NC_011811_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17660 | 17881 |
YP_002456084.1 | NC_011811_p61 | hypothetical protein | phrog_3721 | unknown function | unknown function | 1 | 40116 | 40943 |
YP_002456052.1 | NC_011811_p29 | hypothetical protein | phrog_4725 | unknown function | unknown function | 1 | 15275 | 15847 |
YP_002456105.1 | NC_011811_p82 | hypothetical protein | phrog_27922 | unknown function | unknown function | -1 | 59704 | 59964 |
YP_002456127.1 | NC_011811_p104 | ribonucleoside diphosphate reductase beta chain | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 76337 | 77434 |
YP_002456034.1 | NC_011811_p11 | hypothetical protein | phrog_4109 | unknown function | unknown function | 1 | 7371 | 7937 |
YP_002456028.1 | NC_011811_p5 | hypothetical protein | phrog_5768 | unknown function | unknown function | 1 | 4503 | 4697 |
YP_002456086.1 | NC_011811_p63 | hypothetical protein | phrog_196 | baseplate hub | tail | 1 | 41276 | 42361 |
YP_002456110.1 | NC_011811_p87 | hypothetical protein | phrog_28040 | unknown function | unknown function | -1 | 60935 | 61192 |
YP_002456060.1 | NC_011811_p37 | endolysin | phrog_7 | endolysin | lysis | -1 | 18827 | 19300 |
YP_002456032.1 | NC_011811_p9 | hypothetical protein | phrog_23275 | unknown function | unknown function | 1 | 6711 | 7004 |
YP_002456066.1 | NC_011811_p43 | hypothetical protein | phrog_2114 | unknown function | unknown function | 1 | 25346 | 26080 |
YP_002456067.1 | NC_011811_p44 | hypothetical protein | phrog_23097 | unknown function | unknown function | 1 | 26129 | 26317 |
YP_002456092.1 | NC_011811_p69 | tail fiber protein | phrog_2097 | tail fiber protein | tail | 1 | 46123 | 47196 |
YP_002456072.1 | NC_011811_p49 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 30165 | 30497 |
YP_002456076.1 | NC_011811_p53 | hypothetical protein | phrog_1732 | unknown function | unknown function | 1 | 33407 | 33874 |
YP_002456033.1 | NC_011811_p10 | hypothetical protein | phrog_4040 | unknown function | unknown function | 1 | 7004 | 7369 |
YP_002456124.1 | NC_011811_p101 | hypothetical protein | phrog_4007 | unknown function | unknown function | 1 | 73373 | 73708 |
YP_002456107.1 | NC_011811_p84 | hypothetical protein | phrog_29194 | unknown function | unknown function | -1 | 60121 | 60330 |
YP_002456087.1 | NC_011811_p64 | baseplate assembly protein | phrog_11 | baseplate spike | tail | 1 | 42361 | 43005 |
YP_002456137.1 | NC_011811_p114 | phosphoribosyl pyrophosphate synthetase | phrog_619 | ribose-phosphate pyrophosphokinase | other | 1 | 80737 | 81582 |
YP_002456053.1 | NC_011811_p30 | hypothetical protein | phrog_9030 | unknown function | unknown function | 1 | 15912 | 16151 |
YP_002456082.1 | NC_011811_p59 | hypothetical protein | phrog_1613 | tail assembly chaperone | tail | 1 | 37243 | 37653 |
YP_002456120.1 | NC_011811_p97 | exodeoxyribonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 70766 | 71839 |
YP_002456103.1 | NC_011811_p80 | hypothetical protein | phrog_4116 | unknown function | unknown function | -1 | 58366 | 58716 |
YP_002456085.1 | NC_011811_p62 | hypothetical protein | phrog_349 | virion structural protein | head and packaging | 1 | 40943 | 41266 |
YP_002456122.1 | NC_011811_p99 | hypothetical protein | phrog_27397 | unknown function | unknown function | 1 | 72316 | 72582 |
YP_002456031.1 | NC_011811_p8 | hypothetical protein | phrog_2267 | unknown function | unknown function | 1 | 6007 | 6474 |
YP_002456024.1 | NC_011811_p1 | RIIA | phrog_612 | RIIA lysis inhibitor | lysis | 1 | 1 | 2451 |
YP_002456114.1 | NC_011811_p91 | hypothetical protein | phrog_4039 | unknown function | unknown function | 1 | 64921 | 65328 |
YP_002456059.1 | NC_011811_p36 | hypothetical protein | phrog_38350 | unknown function | unknown function | -1 | 18529 | 18777 |
YP_002456040.1 | NC_011811_p17 | hypothetical protein | phrog_4190 | unknown function | unknown function | 1 | 10865 | 11362 |
YP_002456101.1 | NC_011811_p78 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 55738 | 56841 |
YP_002456139.1 | NC_011811_p116 | hypothetical protein | phrog_18901 | unknown function | unknown function | 1 | 83537 | 83998 |
YP_002456080.1 | NC_011811_p57 | conserved structural protein | phrog_205 | tail sheath | tail | 1 | 35356 | 36714 |
YP_002456096.1 | NC_011811_p73 | hypothetical protein | phrog_402 | unknown function | unknown function | 1 | 53120 | 53329 |
YP_002456061.1 | NC_011811_p38 | conserved structural protein | phrog_3995 | tail protein | tail | -1 | 19350 | 19964 |
YP_002456044.1 | NC_011811_p21 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12565 | 12801 |
YP_002456141.1 | NC_011811_p118 | hypothetical protein | phrog_3931 | unknown function | unknown function | 1 | 84338 | 84502 |
YP_002456140.1 | NC_011811_p117 | hypothetical protein | phrog_27920 | unknown function | unknown function | 1 | 83986 | 84327 |
YP_002456043.1 | NC_011811_p20 | hypothetical protein | phrog_26134 | unknown function | unknown function | 1 | 12249 | 12464 |
YP_002456077.1 | NC_011811_p54 | hypothetical protein | phrog_222 | tail completion or Neck1 protein | connector | 1 | 33875 | 34360 |
YP_002456090.1 | NC_011811_p67 | hypothetical protein | phrog_4017 | baseplate protein | tail | 1 | 44915 | 45763 |
YP_002456050.1 | NC_011811_p27 | hypothetical protein | phrog_4401 | unknown function | unknown function | 1 | 14643 | 14921 |
YP_002456075.1 | NC_011811_p52 | hypothetical protein | phrog_29 | major head protein | head and packaging | 1 | 32281 | 33387 |
YP_002456081.1 | NC_011811_p58 | hypothetical protein | phrog_280 | virion structural protein | head and packaging | 1 | 36730 | 37185 |
YP_002456062.1 | NC_011811_p39 | hypothetical protein | phrog_4034 | unknown function | unknown function | -1 | 19968 | 20585 |
YP_002456056.1 | NC_011811_p33 | hypothetical protein | phrog_25778 | unknown function | unknown function | -1 | 17913 | 18104 |
YP_002456073.1 | NC_011811_p50 | prohead protease | phrog_53 | head maturation protease | head and packaging | 1 | 30505 | 31875 |
YP_002456074.1 | NC_011811_p51 | conserved structural protein | phrog_4146 | tail protease | other | 1 | 31887 | 32258 |
YP_002456093.1 | NC_011811_p70 | proximal tail fiber subunit | phrog_23426 | tail protein | tail | 1 | 47284 | 48792 |
YP_002456091.1 | NC_011811_p68 | hypothetical protein | phrog_4141 | unknown function | unknown function | 1 | 45766 | 46119 |
YP_002456094.1 | NC_011811_p71 | tail fiber protein | phrog_22179 | tail fiber protein | tail | 1 | 48802 | 49536 |
YP_002456063.1 | NC_011811_p40 | hypothetical protein | phrog_27012 | unknown function | unknown function | -1 | 20582 | 20800 |
YP_002456095.1 | NC_011811_p72 | structural protein | phrog_2871 | tail protein | tail | 1 | 49536 | 53009 |
YP_002456118.1 | NC_011811_p95 | DNA primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 67818 | 69731 |
YP_002456088.1 | NC_011811_p65 | hypothetical protein | phrog_120 | baseplate wedge subunit | tail | 1 | 43005 | 43421 |
YP_002456128.1 | NC_011811_p105 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 77434 | 77682 |
YP_002456121.1 | NC_011811_p98 | hypothetical protein | phrog_447 | NAD synthetase | other | 1 | 71832 | 72347 |
YP_002456099.1 | NC_011811_p76 | dihydrofolate reductase | phrog_316 | dihydrofolate reductase | DNA, RNA and nucleotide metabolism | -1 | 54637 | 55197 |
YP_002456047.1 | NC_011811_p24 | hypothetical protein | phrog_3303 | unknown function | unknown function | 1 | 13262 | 13849 |
YP_002456065.1 | NC_011811_p42 | hypothetical protein | phrog_4114 | unknown function | unknown function | 1 | 21381 | 21746 |
YP_002456109.1 | NC_011811_p86 | hypothetical protein | phrog_8162 | unknown function | unknown function | -1 | 60625 | 60933 |
YP_002456135.1 | NC_011811_p112 | hypothetical protein | phrog_3500 | unknown function | unknown function | 1 | 79952 | 80464 |
YP_002456108.1 | NC_011811_p85 | hypothetical protein | phrog_5848 | unknown function | unknown function | -1 | 60311 | 60625 |
YP_002456045.1 | NC_011811_p22 | hypothetical protein | phrog_23739 | unknown function | unknown function | 1 | 12804 | 12938 |
YP_002456126.1 | NC_011811_p103 | ribonucleoside triphosphate reductase alpha chain | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 74048 | 76282 |
YP_002456138.1 | NC_011811_p115 | nicotinamide phosphoribosyl transferase | phrog_448 | nicotinamide phosphoribosyl transferase | other | 1 | 81548 | 83425 |
YP_002456068.1 | NC_011811_p45 | hypothetical protein | phrog_22528 | unknown function | unknown function | 1 | 26391 | 26573 |
YP_002456026.1 | NC_011811_p3 | hypothetical protein | phrog_22449 | unknown function | unknown function | 1 | 3672 | 3914 |
YP_002456134.1 | NC_011811_p111 | hypothetical protein | phrog_3500 | unknown function | unknown function | 1 | 79922 | 80464 |
YP_002456079.1 | NC_011811_p56 | hypothetical protein | phrog_4082 | unknown function | unknown function | 1 | 34743 | 35351 |
YP_002456030.1 | NC_011811_p7 | PseT polynucleotide 5'-kinase/3'-phosphatase | phrog_3970 | polynucleotide kinase | other | 1 | 5274 | 5924 |
YP_002456112.1 | NC_011811_p89 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 61478 | 64168 |
YP_002456104.1 | NC_011811_p81 | hypothetical protein | phrog_200 | lipoprotein | other | -1 | 58823 | 59701 |
YP_002456071.1 | NC_011811_p48 | hypothetical protein | phrog_3977 | unknown function | unknown function | 1 | 29671 | 30165 |
YP_002456039.1 | NC_011811_p16 | hypothetical protein | phrog_26868 | unknown function | unknown function | 1 | 10110 | 10775 |
YP_002456036.1 | NC_011811_p13 | hypothetical protein | phrog_2425 | unknown function | unknown function | 1 | 8199 | 8474 |
YP_002456083.1 | NC_011811_p60 | hypothetical protein | phrog_4036 | tail length tape measure protein | tail | 1 | 37890 | 40112 |
YP_002456078.1 | NC_011811_p55 | hypothetical protein | phrog_2874 | unknown function | unknown function | 1 | 34357 | 34743 |
YP_002456089.1 | NC_011811_p66 | baseplate component | phrog_6 | baseplate wedge subunit | tail | 1 | 43421 | 44905 |
YP_002456037.1 | NC_011811_p14 | Tk.4 conserved hypothetical protein | phrog_335 | phosphatase | other | 1 | 8482 | 9264 |
YP_002456102.1 | NC_011811_p79 | tRNA nucleotidyltransferase/poly(A) polymerase | phrog_2244 | tRNA nucleotidyltransferase | DNA, RNA and nucleotide metabolism | -1 | 57090 | 58358 |