Genomic map of Mycobacterium phage Phlyer (NC_012027)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_012027
Definition
Mycobacterium phage Phlyer, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Pipefishvirus; unclassified Pipefishvirus.
DB of origin
REFSEQ
Length
69378
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
103
%GC
67.48
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_002564146.1 NC_012027_p48 phi:0000326 - phage function unknown phrog_870 unknown function unknown function -1 43409 43954
YP_002564132.1 NC_012027_p34 phi:0000326 - phage function unknown phrog_240 head protein head and packaging 1 34190 34573
YP_002564118.1 NC_012027_p20 phi:0000326 - phage function unknown phrog_2525 unknown function unknown function 1 16672 17004
YP_002564116.1 NC_012027_p18 phi:0000326 - phage function unknown phrog_2272 unknown function unknown function 1 15753 16199
YP_002564188.1 NC_012027_p90 phi:0000326 - phage function unknown phrog_5355 unknown function unknown function -1 64011 64166
YP_002564200.1 NC_012027_p102 phi:0000326 - phage function unknown phrog_6432 unknown function unknown function 1 68807 68962
YP_002564139.1 NC_012027_p41 phi:0000326 - phage function unknown phrog_892 tail fiber protein tail 1 38342 38752
YP_002564142.1 NC_012027_p44 phi:0000326 - phage function unknown phrog_955 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 39766 40251
YP_002564176.1 NC_012027_p78 phi:0000326 - phage function unknown phrog_4974 unknown function unknown function -1 61137 61325
YP_002564194.1 NC_012027_p96 phi:0000326 - phage function unknown phrog_1010 unknown function unknown function -1 65998 66486
YP_002564120.1 NC_012027_p22 phi:0000326 - phage function unknown phrog_6514 unknown function unknown function -1 18233 18343
YP_002564174.1 NC_012027_p76 phi:0000326 - phage function unknown phrog_6229 unknown function unknown function 1 60268 60615
YP_002564152.1 NC_012027_p54 phi:0000326 - phage function unknown phrog_3892 unknown function unknown function -1 48353 48667
YP_002564105.1 NC_012027_p7 phi:0000326 - phage function unknown phrog_6317 unknown function unknown function -1 5377 5628
YP_002564107.1 NC_012027_p9 phi:0000326 - phage function unknown phrog_6276 unknown function unknown function -1 6305 6601
YP_002564121.1 NC_012027_p23 phi:0000326 - phage function unknown phrog_783 head-tail adaptor connector 1 18474 19214
YP_002564192.1 NC_012027_p94 phi:0000326 - phage function unknown phrog_6114 unknown function unknown function -1 65257 65436
YP_002564162.1 NC_012027_p64 phi:0000326 - phage function unknown phrog_6656 unknown function unknown function -1 55879 56109
YP_002564125.1 NC_012027_p27 phi:0000326 - phage function unknown phrog_1118 tail assembly chaperone tail 1 20511 21104
YP_002564201.1 NC_012027_p103 phi:0000326 - phage function unknown phrog_5930 unknown function unknown function 1 69027 69329
YP_002564169.1 NC_012027_p71 phi:0000326 - phage function unknown phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 58634 59233
YP_002564101.1 NC_012027_p3 phi:0000326 - phage function unknown phrog_6307 unknown function unknown function 1 851 1072
YP_002564138.1 NC_012027_p40 phi:0000326 - phage function unknown phrog_941 unknown function unknown function 1 38001 38324
YP_002564117.1 NC_012027_p19 phi:0000326 - phage function unknown phrog_2344 unknown function unknown function 1 16196 16675
YP_002564161.1 NC_012027_p63 phi:0000326 - phage function unknown phrog_6735 unknown function unknown function -1 55723 55842
YP_002564135.1 NC_012027_p37 phi:0000326 - phage function unknown phrog_282 unknown function unknown function 1 35668 36267
YP_002564136.1 NC_012027_p38 phi:0000326 - phage function unknown phrog_3329 unknown function unknown function 1 36264 37613
YP_002564130.1 NC_012027_p32 phi:0000326 - phage function unknown phrog_356 minor tail protein tail 1 31578 32960
YP_002564179.1 NC_012027_p81 phi:0000326 - phage function unknown phrog_4461 unknown function unknown function -1 61980 62078
YP_002564145.1 NC_012027_p47 LysB phrog_102 endolysin lysis 1 42275 43339
YP_002564099.1 NC_012027_p1 phi:0000326 - phage function unknown phrog_723 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 1 693
YP_002564168.1 NC_012027_p70 phi:0000326 - phage function unknown phrog_4938 unknown function unknown function 1 58473 58637
YP_002564141.1 NC_012027_p43 phi:0000326 - phage function unknown phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 39533 39769
YP_002564198.1 NC_012027_p100 phi:0000326 - phage function unknown phrog_5733 unknown function unknown function 1 68338 68583
YP_002564182.1 NC_012027_p84 phi:0000326 - phage function unknown phrog_6338 unknown function unknown function -1 62403 62561
YP_002564178.1 NC_012027_p80 phi:0000126 - DNA endonuclease activity phrog_960 HNH endonuclease DNA, RNA and nucleotide metabolism -1 61658 61987
YP_002564197.1 NC_012027_p99 phi:0000326 - phage function unknown phrog_4825 unknown function unknown function 1 68154 68327
YP_002564166.1 NC_012027_p68 phi:0000326 - phage function unknown phrog_1016 unknown function unknown function 1 57962 58249
YP_002564143.1 NC_012027_p45 phi:0000326 - phage function unknown phrog_636 unknown function unknown function -1 40248 40946
YP_002564191.1 NC_012027_p93 phi:0000326 - phage function unknown phrog_5411 HNH endonuclease DNA, RNA and nucleotide metabolism -1 64877 65257
YP_002564196.1 NC_012027_p98 phi:0000326 - phage function unknown phrog_2972 unknown function unknown function -1 67746 67976
YP_002564150.1 NC_012027_p52 phi:0000114 - DNA helicase activity phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 46200 47897
YP_002564112.1 NC_012027_p14 phi:0000064 - phage head/capsid protein phrog_777 major head protein head and packaging 1 11748 13775
YP_002564111.1 NC_012027_p13 phi:0000326 - phage function unknown phrog_2069 unknown function unknown function 1 11397 11603
YP_002564114.1 NC_012027_p16 phi:0000326 - phage function unknown phrog_970 unknown function unknown function 1 14698 15303
YP_002564103.1 NC_012027_p5 IBrB, ParB-like nuclease domain phrog_2159 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 2148 2717
YP_002564193.1 NC_012027_p95 phi:0000326 - phage function unknown phrog_6469 unknown function unknown function -1 65433 65855
YP_002564133.1 NC_012027_p35 phi:0000326 - phage function unknown phrog_948 unknown function unknown function 1 34582 35007
YP_002564172.1 NC_012027_p74 phi:0000326 - phage function unknown phrog_1306 unknown function unknown function -1 59916 60050
YP_002564167.1 NC_012027_p69 phi:0000326 - phage function unknown phrog_6404 unknown function unknown function 1 58246 58476
YP_002564115.1 NC_012027_p17 phi:0000326 - phage function unknown phrog_565 holin lysis 1 15300 15734
YP_002564160.1 NC_012027_p62 phi:0000326 - phage function unknown phrog_993 unknown function unknown function -1 55235 55723
YP_002564165.1 NC_012027_p67 phi:0000326 - phage function unknown phrog_996 unknown function unknown function 1 57198 57965
YP_002564128.1 NC_012027_p30 phi:0000326 - phage function unknown phrog_837 minor tail protein tail 1 28308 29351
YP_002564149.1 NC_012027_p51 phi:0000326 - phage function unknown phrog_780 unknown function unknown function -1 45885 46154
YP_002564106.1 NC_012027_p8 RuvC phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 5625 6242
YP_002564171.1 NC_012027_p73 phi:0000326 - phage function unknown phrog_4885 unknown function unknown function 1 59646 59903
YP_002564155.1 NC_012027_p57 phi:0000326 - phage function unknown phrog_6342 unknown function unknown function -1 51832 52572
YP_002564181.1 NC_012027_p83 phi:0000326 - phage function unknown phrog_6460 unknown function unknown function -1 62236 62406
YP_002564153.1 NC_012027_p55 phi:0000326 - phage function unknown phrog_1371 unknown function unknown function -1 48679 49152
YP_002564122.1 NC_012027_p24 phi:0000326 - phage function unknown phrog_810 unknown function unknown function 1 19211 19732
YP_002564100.1 NC_012027_p2 phi:0000326 - phage function unknown phrog_6919 unknown function unknown function 1 690 854
YP_002564187.1 NC_012027_p89 phi:0000326 - phage function unknown phrog_2089 unknown function unknown function -1 63802 63966
YP_002564157.1 NC_012027_p59 phi:0000326 - phage function unknown phrog_6482 unknown function unknown function -1 54386 54661
YP_002564189.1 NC_012027_p91 phi:0000326 - phage function unknown phrog_6199 unknown function unknown function -1 64241 64588
YP_002564126.1 NC_012027_p28 phi:0000086 - phage tail tape measure protein phrog_934 tail length tape measure protein tail 1 21130 26871
YP_002564108.1 NC_012027_p10 phi:0000326 - phage function unknown phrog_781 unknown function unknown function 1 6706 7041
YP_002564186.1 NC_012027_p88 phi:0000326 - phage function unknown phrog_7490 unknown function unknown function -1 63520 63708
YP_002564183.1 NC_012027_p85 phi:0000326 - phage function unknown phrog_4392 unknown function unknown function -1 62554 62907
YP_002564164.1 NC_012027_p66 phi:0000326 - phage function unknown phrog_982 unknown function unknown function -1 56533 56802
YP_002564110.1 NC_012027_p12 phi:0000068 - phage portal protein phrog_859 portal protein head and packaging 1 8965 11397
YP_002564154.1 NC_012027_p56 phi:0000114 - DNA helicase activity phrog_906 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 49195 51798
YP_002564199.1 NC_012027_p101 phi:0000326 - phage function unknown phrog_6097 unknown function unknown function 1 68580 68816
YP_002564124.1 NC_012027_p26 phi:0000326 - phage function unknown phrog_5 tail completion or Neck1 protein connector 1 20098 20511
YP_002564129.1 NC_012027_p31 phi:0000326 - phage function unknown phrog_746 minor tail protein tail 1 29348 31576
YP_002564177.1 NC_012027_p79 phi:0000326 - phage function unknown phrog_6691 unknown function unknown function -1 61380 61661
YP_002564185.1 NC_012027_p87 phi:0000326 - phage function unknown phrog_7414 unknown function unknown function -1 63236 63523
YP_002564140.1 NC_012027_p42 phi:0000326 - phage function unknown phrog_2804 virion structural protein head and packaging 1 38752 39477
YP_002564175.1 NC_012027_p77 phi:0000326 - phage function unknown phrog_928 unknown function unknown function 1 60597 61124
YP_002564147.1 NC_012027_p49 phi:0000326 - phage function unknown phrog_466 exonuclease DNA, RNA and nucleotide metabolism -1 44004 45617
YP_002564109.1 NC_012027_p11 phi:0000326 - phage function unknown phrog_776 portal protein head and packaging 1 7071 8975
YP_002564190.1 NC_012027_p92 phi:0000326 - phage function unknown phrog_6428 unknown function unknown function -1 64665 64877
YP_002564123.1 NC_012027_p25 phi:0000326 - phage function unknown phrog_901 unknown function unknown function 1 19743 20114
YP_002564195.1 NC_012027_p97 phi:0000326 - phage function unknown phrog_1221 unknown function unknown function -1 66560 67618
YP_002564159.1 NC_012027_p61 phi:0000326 - phage function unknown phrog_3025 unknown function unknown function -1 54792 55238
YP_002564148.1 NC_012027_p50 phi:0000326 - phage function unknown phrog_7519 unknown function unknown function -1 45617 45838
YP_002564119.1 NC_012027_p21 phi:0000082 - phage major tail protein phrog_792 major tail protein tail 1 17092 18171
YP_002564137.1 NC_012027_p39 phi:0000326 - phage function unknown phrog_915 unknown function unknown function 1 37636 38004
YP_002564134.1 NC_012027_p36 phi:0000326 - phage function unknown phrog_282 unknown function unknown function 1 35018 35671
YP_002564173.1 NC_012027_p75 phi:0000326 - phage function unknown phrog_6511 unknown function unknown function 1 60105 60257
YP_002564104.1 NC_012027_p6 phi:0000073 - phage terminase large subunit phrog_38 terminase large subunit head and packaging 1 2714 5236
YP_002564131.1 NC_012027_p33 phi:0000326 - phage function unknown phrog_416 minor tail protein tail 1 32957 34159
YP_002564102.1 NC_012027_p4 IBrA, PAPS reductase domain phrog_2302 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover 1 1069 2151
YP_002564113.1 NC_012027_p15 phi:0000326 - phage function unknown phrog_779 unknown function unknown function 1 13874 14683
YP_002564170.1 NC_012027_p72 phi:0000326 - phage function unknown phrog_1031 unknown function unknown function 1 59238 59642
YP_002564127.1 NC_012027_p29 phi:0000326 - phage function unknown phrog_838 unknown function unknown function 1 26881 28311
YP_002564144.1 NC_012027_p46 LysA phrog_700 endolysin lysis 1 41009 42274
YP_002564158.1 NC_012027_p60 phi:0000326 - phage function unknown phrog_6936 unknown function unknown function -1 54658 54795
YP_002564180.1 NC_012027_p82 phi:0000326 - phage function unknown phrog_6304 unknown function unknown function -1 62075 62239
YP_002564163.1 NC_012027_p65 phi:0000326 - phage function unknown phrog_6105 unknown function unknown function -1 56106 56456
YP_002564156.1 NC_012027_p58 phi:0000115 - DNA directed DNA polymerase activity phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 52569 54386
YP_002564184.1 NC_012027_p86 phi:0000326 - phage function unknown phrog_7541 unknown function unknown function -1 62907 63239
YP_002564151.1 NC_012027_p53 phi:0000326 - phage function unknown phrog_6400 unknown function unknown function -1 47991 48353