| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_012093 |
Definition |
Pseudomonas phage phi2954 segment S, complete genome. |
Molecule type |
RNA |
Genome structure |
linear |
Taxonomy |
Viruses; Riboviria; Orthornavirae; Duplornaviricota; Vidaverviricetes; Mindivirales; Cystoviridae; Cystovirus. |
DB of origin |
REFSEQ |
Length |
2578 |
Host Name |
Pseudomonas syringae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
4 |
%GC |
55.89 |
Number of singletons |
3 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_002600772.1 | NC_012093_p3 | P9 | singleton | unknown function | unknown function | 1 | 1557 | 1802 |
| YP_002600770.1 | NC_012093_p1 | P8 | singleton | unknown function | unknown function | 1 | 495 | 1127 |
| YP_002600771.1 | NC_012093_p2 | P12 | singleton | unknown function | unknown function | 1 | 1142 | 1492 |
| YP_002600773.1 | NC_012093_p4 | P5 | phrog_3513 | endolysin | lysis | 1 | 1809 | 2504 |