Genomic map of Escherichia virus SSL2009a (NC_012223)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_012223
Definition
Enterobacteria phage SSL2009a, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dhillonvirus.
DB of origin
REFSEQ
Length
44899
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
67
%GC
54.66
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008550174.1 NC_012223_p61 holin-like class II protein phrog_2359 holin lysis 1 41862 42152
YP_008550164.1 NC_012223_p45 hypothetical protein phrog_10102 unknown function unknown function -1 32797 32967
YP_008550169.1 NC_012223_p56 hypothetical protein phrog_12533 unknown function unknown function 1 40377 40646
YP_008550146.1 NC_012223_p1 terminase large subunit phrog_3064 terminase head and packaging 1 56 628
YP_008550156.1 NC_012223_p32 hypothetical protein phrog_415 polynucleotide kinase other -1 25195 25665
YP_008550170.1 NC_012223_p57 hypothetical protein phrog_15977 unknown function unknown function 1 40643 40786
YP_002720085.1 NC_012223_p3 structural protein phrog_145 portal protein head and packaging 1 2025 3545
YP_002720086.1 NC_012223_p4 head morphogenesis protein phrog_241 head morphogenesis head and packaging 1 3529 4632
YP_008550160.1 NC_012223_p36 hypothetical protein phrog_18961 unknown function unknown function -1 26798 27040
YP_008550149.1 NC_012223_p12 hypothetical protein phrog_11158 unknown function unknown function 1 8813 8929
YP_008550161.1 NC_012223_p37 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 27109 27444
YP_002720070.1 NC_012223_p14 tail protein phrog_169 tail completion or Neck1 protein connector 1 9271 9864
YP_002720087.1 NC_012223_p5 hypothetical protein phrog_2536 Rz-like spanin lysis 1 4625 4954
YP_008550176.1 NC_012223_p63 lysozyme phrog_7 endolysin lysis 1 42381 42872
YP_002720076.1 NC_012223_p8 hypothetical protein phrog_24635 unknown function unknown function -1 5884 6213
YP_002720050.1 NC_012223_p48 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 34131 35561
YP_002720057.1 NC_012223_p27 superinfection exclusion protein phrog_1119 Cor superinfection exclusion protein moron, auxiliary metabolic gene and host takeover -1 22063 22281
YP_008550159.1 NC_012223_p35 hypothetical protein phrog_10530 DNA ligase DNA, RNA and nucleotide metabolism -1 26339 26797
YP_002720040.1 NC_012223_p38 hypothetical protein phrog_757 DNA methyltransferase other -1 27441 28136
YP_002720072.1 NC_012223_p11 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 8281 8811
YP_002720055.2 NC_012223_p17 hypothetical protein phrog_569 tail length tape measure protein tail 1 11144 11506
YP_008550147.1 NC_012223_p6 hypothetical protein phrog_1267 Rz-like spanin lysis 1 4836 5066
YP_002720059.1 NC_012223_p25 hypothetical protein phrog_557 outer membrane protein other 1 21070 21372
YP_002720062.1 NC_012223_p22 minor tail protein phrog_30 minor tail protein tail 1 16268 17008
YP_002720051.1 NC_012223_p49 hypothetical protein phrog_9934 unknown function unknown function -1 35561 35749
YP_002720066.1 NC_012223_p18 hypothetical protein phrog_14875 unknown function unknown function 1 11725 11820
YP_002720065.1 NC_012223_p19 tail tape measure protein phrog_24 tail length tape measure protein tail 1 12205 14844
YP_002720063.1 NC_012223_p21 minor tail protein L phrog_18 minor tail protein tail 1 15477 16265
YP_002720060.1 NC_012223_p24 tail fiber protein phrog_31 central tail fiber J tail 1 17613 21032
YP_002720043.1 NC_012223_p41 hypothetical protein phrog_5558 Lar-like restriction alleviation protein moron, auxiliary metabolic gene and host takeover -1 29824 29997
YP_002720054.1 NC_012223_p52 hypothetical protein phrog_9366 transposase integration and excision 1 36993 37322
YP_008550163.1 NC_012223_p40 hypothetical protein phrog_9291 unknown function unknown function -1 29562 29780
YP_002720068.1 NC_012223_p16 major tail protein phrog_584 major tail protein tail 1 10348 11073
YP_008550155.1 NC_012223_p31 hypothetical protein singleton unknown function unknown function 1 24859 25401
YP_002720089.1 NC_012223_p7 hypothetical protein phrog_1965 unknown function unknown function -1 5080 5844
YP_002720053.1 NC_012223_p51 hypothetical protein phrog_3127 unknown function unknown function -1 36050 36592
YP_008550167.1 NC_012223_p54 hypothetical protein phrog_23498 unknown function unknown function 1 39967 40080
YP_002720045.1 NC_012223_p43 hypothetical protein phrog_1222 unknown function unknown function -1 30313 30504
YP_008550158.1 NC_012223_p34 DNA methyltransferase phrog_111 DNA methyltransferase other -1 25867 26352
YP_008550171.1 NC_012223_p58 hypothetical protein phrog_10243 unknown function unknown function 1 40783 41400
YP_002720075.1 NC_012223_p9 hypothetical protein phrog_206 head scaffolding protein head and packaging 1 6353 7054
YP_002720067.2 NC_012223_p28 tail tip protein phrog_1980 tail fiber protein tail 1 22362 23978
YP_008550165.1 NC_012223_p46 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 33026 33805
YP_008550173.1 NC_012223_p60 hypothetical protein phrog_2531 unknown function unknown function 1 41483 41809
YP_008550152.1 NC_012223_p26 hypothetical protein phrog_425 membrane associated protein moron, auxiliary metabolic gene and host takeover 1 21375 22046
YP_008550162.1 NC_012223_p39 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 28133 29557
YP_008550177.1 NC_012223_p64 hypothetical protein phrog_215 structural protein with Ig domain head and packaging 1 42889 43290
YP_008550179.1 NC_012223_p66 hypothetical protein singleton unknown function unknown function 1 43465 43638
YP_008550178.1 NC_012223_p65 hypothetical protein singleton unknown function unknown function 1 43386 43475
YP_002720061.1 NC_012223_p23 tail assembly protein I phrog_32 tail assembly protein tail 1 16999 17616
YP_008550175.1 NC_012223_p62 holin-like class I protein phrog_2508 holin lysis 1 42149 42394
YP_008550154.1 NC_012223_p30 hypothetical protein phrog_9871 unknown function unknown function -1 24622 25131
YP_008550157.1 NC_012223_p33 hypothetical protein phrog_10685 unknown function unknown function -1 25662 25886
YP_002720049.1 NC_012223_p47 hypothetical protein phrog_11211 unknown function unknown function -1 33896 34138
YP_002720052.1 NC_012223_p50 hypothetical protein phrog_4965 unknown function unknown function -1 35750 36001
YP_008550166.1 NC_012223_p53 replicative helicase/primease phrog_3228 replicative helicase-primase DNA, RNA and nucleotide metabolism 1 37333 39597
YP_009177646.1 NC_012223_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 628 2013
YP_002720046.1 NC_012223_p44 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 30509 32800
YP_008550180.1 NC_012223_p67 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 43703 44845
YP_008550151.1 NC_012223_p20 minor tail protein phrog_9922 minor tail protein tail 1 14881 15480
YP_002720069.1 NC_012223_p15 hypothetical protein phrog_179 tail terminator connector 1 9864 10286
YP_008550148.1 NC_012223_p10 structural protein phrog_247 major head protein head and packaging 1 7152 8252
YP_008550168.1 NC_012223_p55 hypothetical protein phrog_9839 unknown function unknown function 1 40077 40367
YP_002720044.1 NC_012223_p42 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 30038 30316
YP_008550172.1 NC_012223_p59 hypothetical protein phrog_13628 unknown function unknown function 1 41397 41537
YP_008550150.1 NC_012223_p13 structural protein phrog_161 head closure Hc1 connector 1 8916 9269
YP_008550153.1 NC_012223_p29 hypothetical protein phrog_10558 unknown function unknown function -1 24005 24580