Genomic map of Pseudomonas phage phikF77 (NC_012418)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_012418
Definition
Pseudomonas phage phikF77, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Krylovirinae; Phikmvvirus; Pseudomonas virus kF77.
DB of origin
REFSEQ
Length
43152
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
62.86
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_002727847.1 NC_012418_p28 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 17845 18207
YP_002727854.1 NC_012418_p35 scaffolding protein phrog_1018 head scaffolding protein head and packaging 1 23678 24649
YP_002727867.1 NC_012418_p48 holin phrog_6597 holin lysis 1 40943 41143
YP_002727841.1 NC_012418_p22 DNA polymerase A phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 11583 14009
YP_002727821.1 NC_012418_p2 hypothetical protein phrog_1448 unknown function unknown function 1 1950 2489
YP_002727853.1 NC_012418_p34 head-tail connector protein phrog_449 head-tail adaptor connector 1 22142 23674
YP_002727868.1 NC_012418_p49 endolysin phrog_7 endolysin lysis 1 41140 41622
YP_002727831.1 NC_012418_p12 hypothetical protein phrog_6915 unknown function unknown function 1 5204 5563
YP_002727849.1 NC_012418_p30 T3/T7-like RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 18559 21009
YP_002727833.1 NC_012418_p14 hypothetical protein phrog_9409 unknown function unknown function 1 6455 6874
YP_002727852.1 NC_012418_p33 structural protein phrog_3112 virion structural protein head and packaging 1 21834 22130
YP_002727846.1 NC_012418_p27 hypothetical protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 16789 17835
YP_002727850.1 NC_012418_p31 hypothetical protein phrog_6575 unknown function unknown function 1 21165 21419
YP_002727855.1 NC_012418_p36 capsid protein phrog_267 major head protein head and packaging 1 24702 25712
YP_002727822.1 NC_012418_p3 hypothetical protein phrog_18183 unknown function unknown function 1 2556 2657
YP_002727848.1 NC_012418_p29 hypothetical protein phrog_18213 unknown function unknown function 1 18200 18550
YP_002727836.1 NC_012418_p17 DnaB helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 8244 9434
YP_002727835.1 NC_012418_p16 DnaG-like primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 7373 8197
YP_002727829.1 NC_012418_p10 hypothetical protein phrog_4342 unknown function unknown function 1 4346 4639
YP_002727842.1 NC_012418_p23 hypothetical protein phrog_5437 unknown function unknown function 1 14006 14317
YP_002727830.1 NC_012418_p11 hypothetical protein phrog_5433 unknown function unknown function 1 4718 5134
YP_002727861.1 NC_012418_p42 structural protein phrog_6953 tail fiber protein tail 1 36106 36861
YP_002727843.1 NC_012418_p24 hypothetical protein phrog_862 unknown function unknown function 1 14372 15421
YP_002727844.1 NC_012418_p25 5'-3' exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 15421 16362
YP_002727866.1 NC_012418_p47 terminase large subunit phrog_38 terminase large subunit head and packaging 1 39141 40946
YP_002727838.1 NC_012418_p19 ATP-dependent DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 10041 10988
YP_002727869.1 NC_012418_p50 phage lambda Rz1-like protein phrog_214 Rz-like spanin lysis 1 41580 41909
YP_002727862.1 NC_012418_p43 tail fiber protein phrog_8874 tail fiber protein tail 1 36861 37319
YP_002727834.1 NC_012418_p15 hypothetical protein phrog_2563 unknown function unknown function 1 6645 7187
YP_002727871.1 NC_012418_p52 structural protein phrog_6908 minor head protein head and packaging 1 41999 42313
YP_002727859.1 NC_012418_p40 internal virion protein phrog_2083 internal virion lysozyme motif head and packaging 1 29391 32087
YP_002727860.1 NC_012418_p41 virion protein phrog_342 internal virion protein with endolysin domain head and packaging 1 32091 36104
YP_002727845.1 NC_012418_p26 DNA endonuclease VII phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 16352 16792
YP_002727837.1 NC_012418_p18 hypothetical protein phrog_1614 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 9424 10041
YP_002727865.1 NC_012418_p46 hypothetical protein phrog_891 terminase small subunit head and packaging 1 38826 39131
YP_002727820.1 NC_012418_p1 hypothetical protein singleton unknown function unknown function 1 1654 1947
YP_002727840.1 NC_012418_p21 hypothetical protein phrog_7292 unknown function unknown function 1 11293 11586
YP_002727828.1 NC_012418_p9 hypothetical protein phrog_4955 unknown function unknown function 1 4088 4336
YP_002727858.1 NC_012418_p39 internal virion protein A phrog_805 internal virion protein head and packaging 1 28846 29391
YP_002727851.1 NC_012418_p32 hypothetical protein phrog_3986 unknown function unknown function 1 21416 21889
YP_002727863.1 NC_012418_p44 tail fiber protein phrog_4176 tail fiber protein tail 1 37312 38217
YP_002727823.1 NC_012418_p4 hypothetical protein phrog_12691 unknown function unknown function 1 2657 2779
YP_002727872.1 NC_012418_p53 structural protein phrog_7171 minor head protein head and packaging 1 42363 42557
YP_002727870.1 NC_012418_p51 Rz1 protein phrog_456 Rz-like spanin lysis 1 41797 41997
YP_002727826.1 NC_012418_p7 hypothetical protein phrog_8496 unknown function unknown function 1 3619 3798
YP_002727864.1 NC_012418_p45 tail fiber protein phrog_4950 tail fiber protein tail 1 38221 38826
YP_002727824.1 NC_012418_p5 hypothetical protein phrog_6951 unknown function unknown function 1 2858 3226
YP_002727827.1 NC_012418_p8 hypothetical protein phrog_4342 unknown function unknown function 1 3798 4091
YP_002727857.1 NC_012418_p38 tail tubular protein B phrog_457 tail protein tail 1 26366 28846
YP_002727856.1 NC_012418_p37 tail tubular protein A phrog_446 tail protein tail 1 25809 26363
YP_002727825.1 NC_012418_p6 hypothetical protein phrog_7027 unknown function unknown function 1 3213 3440
YP_002727832.1 NC_012418_p13 hypothetical protein phrog_6982 DNA polymerase DNA, RNA and nucleotide metabolism 1 5566 6375
YP_002727839.1 NC_012418_p20 hypothetical protein phrog_19207 unknown function unknown function 1 10985 11269