| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_012756 |
Definition |
Streptococcus phage PH10, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
31276 |
Host Name |
Streptococcus oralis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
54 |
%GC |
39.49 |
Number of singletons |
3 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_002925164.1 | NC_012756_p31 | protein of an unannotated phage | phrog_361 | terminase small subunit | head and packaging | 1 | 12826 | 13218 |
| YP_002925168.1 | NC_012756_p35 | protein of an unannotated phage | phrog_80 | head maturation protease | head and packaging | 1 | 16371 | 16961 |
| YP_002925185.1 | NC_012756_p52 | protein of an unannotated phage | phrog_1529 | unknown function | unknown function | -1 | 30632 | 30811 |
| YP_002925138.1 | NC_012756_p5 | protein of an unannotated phage | phrog_3 | transcriptional repressor | transcription regulation | 1 | 2989 | 3198 |
| YP_002925162.1 | NC_012756_p29 | protein of an unannotated phage | phrog_5627 | unknown function | unknown function | 1 | 12040 | 12258 |
| YP_002925156.1 | NC_012756_p23 | protein of an unannotated phage | phrog_884 | unknown function | unknown function | 1 | 9488 | 9736 |
| YP_002925149.1 | NC_012756_p16 | protein of an unannotated phage | phrog_1992 | MazG-like pyrophosphatase | other | 1 | 7091 | 7582 |
| YP_002925145.1 | NC_012756_p12 | protein of an unannotated phage | phrog_1580 | unknown function | unknown function | 1 | 5881 | 6075 |
| YP_002925151.1 | NC_012756_p18 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 7865 | 8014 |
| YP_002925178.1 | NC_012756_p45 | protein of an unannotated phage | phrog_33 | distal tail protein Dit | tail | 1 | 23973 | 24695 |
| YP_002925152.1 | NC_012756_p19 | protein of an unannotated phage | phrog_6716 | unknown function | unknown function | 1 | 8011 | 8337 |
| YP_002925187.1 | NC_012756_p54 | protein of an unannotated phage | phrog_3399 | unknown function | unknown function | -1 | 30953 | 31102 |
| YP_002925143.1 | NC_012756_p10 | protein of an unannotated phage | phrog_7483 | unknown function | unknown function | 1 | 4776 | 4988 |
| YP_002925135.1 | NC_012756_p2 | protein of an unannotated phage | phrog_2700 | unknown function | unknown function | -1 | 1493 | 1900 |
| YP_002925180.1 | NC_012756_p47 | protein of an unannotated phage | phrog_1137 | unknown function | unknown function | 1 | 28090 | 28293 |
| YP_002925170.1 | NC_012756_p37 | protein of an unannotated phage | phrog_390 | Arc-like repressor | transcription regulation | 1 | 18130 | 18432 |
| YP_002925146.1 | NC_012756_p13 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 6076 | 6216 |
| YP_002925171.1 | NC_012756_p38 | protein of an unannotated phage | phrog_2550 | unknown function | unknown function | 1 | 18435 | 18716 |
| YP_002925139.1 | NC_012756_p6 | protein of an unannotated phage | phrog_24094 | unknown function | unknown function | 1 | 3202 | 3432 |
| YP_002925182.1 | NC_012756_p49 | protein of an unannotated phage | phrog_1296 | holin | lysis | 1 | 28941 | 29222 |
| YP_002925173.1 | NC_012756_p40 | protein of an unannotated phage | phrog_5 | tail completion or Neck1 protein | connector | 1 | 18999 | 19346 |
| YP_002925154.1 | NC_012756_p21 | protein of an unannotated phage | phrog_13581 | unknown function | unknown function | 1 | 8757 | 9092 |
| YP_002925159.1 | NC_012756_p26 | protein of an unannotated phage | phrog_8 | transcriptional regulator | transcription regulation | 1 | 10406 | 10744 |
| YP_002925172.1 | NC_012756_p39 | protein of an unannotated phage | phrog_1951 | head-tail adaptor | connector | 1 | 18703 | 19002 |
| YP_002925176.1 | NC_012756_p43 | protein of an unannotated phage | phrog_709 | unknown function | unknown function | 1 | 20268 | 20687 |
| YP_002925160.1 | NC_012756_p27 | protein of an unannotated phage | phrog_36 | transcriptional regulator | transcription regulation | 1 | 10741 | 11142 |
| YP_002925179.1 | NC_012756_p46 | protein of an unannotated phage | phrog_1330 | tail protein | tail | 1 | 24696 | 28109 |
| YP_002925181.1 | NC_012756_p48 | protein of an unannotated phage | phrog_1554 | unknown function | unknown function | 1 | 28296 | 28931 |
| YP_002925141.1 | NC_012756_p8 | protein of an unannotated phage | phrog_463 | anti-repressor | transcription regulation | 1 | 3713 | 4426 |
| YP_002925144.1 | NC_012756_p11 | protein of an unannotated phage | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 5009 | 5881 |
| YP_002925137.1 | NC_012756_p4 | protein of an unannotated phage | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2337 | 2684 |
| YP_002925147.1 | NC_012756_p14 | protein of an unannotated phage | phrog_2882 | DNA methyltransferase | other | 1 | 6207 | 6875 |
| YP_002925184.1 | NC_012756_p51 | protein of an unannotated phage | phrog_6745 | endolysin | lysis | 1 | 29525 | 30529 |
| YP_002925161.1 | NC_012756_p28 | protein of an unannotated phage | phrog_216 | integrase | integration and excision | 1 | 11334 | 11876 |
| YP_002925167.1 | NC_012756_p34 | protein of an unannotated phage | phrog_12 | portal protein | head and packaging | 1 | 15185 | 16387 |
| YP_002925136.1 | NC_012756_p3 | protein of an unannotated phage | phrog_87 | metallo-protease | other | -1 | 1925 | 2326 |
| YP_002925174.1 | NC_012756_p41 | protein of an unannotated phage | phrog_78 | tail terminator | connector | 1 | 19343 | 19666 |
| YP_002925163.1 | NC_012756_p30 | protein of an unannotated phage | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 12389 | 12715 |
| YP_002925155.1 | NC_012756_p22 | protein of an unannotated phage | phrog_7711 | unknown function | unknown function | 1 | 9105 | 9491 |
| YP_002925169.1 | NC_012756_p36 | protein of an unannotated phage | phrog_10 | major head protein | head and packaging | 1 | 16946 | 18118 |
| YP_002925183.1 | NC_012756_p50 | protein of an unannotated phage | phrog_297 | holin | lysis | 1 | 29237 | 29515 |
| YP_002925142.1 | NC_012756_p9 | protein of an unannotated phage | phrog_668 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 4439 | 4696 |
| YP_002925186.1 | NC_012756_p53 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 30813 | 30887 |
| YP_002925140.1 | NC_012756_p7 | protein of an unannotated phage | phrog_25340 | unknown function | unknown function | -1 | 3444 | 3653 |
| YP_002925157.1 | NC_012756_p24 | protein of an unannotated phage | phrog_8899 | unknown function | unknown function | 1 | 9733 | 10134 |
| YP_002925134.1 | NC_012756_p1 | protein of an unannotated phage | phrog_1 | integrase | integration and excision | -1 | 170 | 1318 |
| YP_002925165.1 | NC_012756_p32 | protein of an unannotated phage | phrog_9 | terminase large subunit | head and packaging | 1 | 13211 | 14941 |
| YP_002925175.1 | NC_012756_p42 | protein of an unannotated phage | phrog_88 | major tail protein | tail | 1 | 19678 | 20256 |
| YP_002925148.1 | NC_012756_p15 | protein of an unannotated phage | phrog_1174 | unknown function | unknown function | 1 | 6868 | 7089 |
| YP_002925158.1 | NC_012756_p25 | protein of an unannotated phage | phrog_7626 | unknown function | unknown function | 1 | 10164 | 10415 |
| YP_002925150.1 | NC_012756_p17 | protein of an unannotated phage | phrog_2169 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 7584 | 7850 |
| YP_002925153.1 | NC_012756_p20 | protein of an unannotated phage | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 8327 | 8743 |
| YP_002925177.1 | NC_012756_p44 | protein of an unannotated phage | phrog_58 | tail length tape measure protein | tail | 1 | 20965 | 23979 |
| YP_002925166.1 | NC_012756_p33 | protein of an unannotated phage | phrog_2955 | unknown function | unknown function | 1 | 14949 | 15167 |