Genomic map of Xylella phage Xfas53 (NC_013599)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_013599
Definition
Xylella phage Xfas53, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
DB of origin
REFSEQ
Length
36674
Host Name
Xylella fastidiosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
45
%GC
56.75
Number of singletons
5
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_003344909.1 NC_013599_p19 hypothetical protein phrog_24214 unknown function unknown function 1 13276 13659
YP_003344918.1 NC_013599_p28 Rz1 singleton unknown function unknown function 1 20519 20740
YP_003344915.1 NC_013599_p25 holin phrog_920 holin lysis 1 19462 19809
YP_003344897.1 NC_013599_p7 DNA polymerase A phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 3884 6064
YP_003344898.1 NC_013599_p8 Bro-N family protein phrog_130 anti-repressor Ant transcription regulation -1 6066 7361
YP_003344900.1 NC_013599_p10 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 7915 9195
YP_003344933.1 NC_013599_p43 hypothetical protein phrog_22381 unknown function unknown function -1 33957 34202
YP_003344934.1 NC_013599_p44 hypothetical protein phrog_26190 unknown function unknown function 1 34289 35071
YP_003344916.1 NC_013599_p26 SAR endolysin phrog_7 endolysin lysis 1 19787 20278
YP_003344892.1 NC_013599_p2 hypothetical protein phrog_8896 excisionase integration and excision -1 1409 1666
YP_003344904.1 NC_013599_p14 hypothetical protein phrog_14373 unknown function unknown function -1 10097 10498
YP_003344925.1 NC_013599_p35 DNA stabilization protein phrog_637 head-tail adaptor Ad3 connector 1 27007 27414
YP_003344926.1 NC_013599_p36 head completion protein phrog_578 head closure Hc3 connector 1 27411 29339
YP_003344899.1 NC_013599_p9 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 7352 7918
YP_003344907.1 NC_013599_p17 CI phage repressor phrog_4 transcriptional repressor transcription regulation -1 11339 12349
YP_003344923.1 NC_013599_p33 scaffold protein phrog_8865 head scaffolding protein head and packaging 1 24858 25712
YP_003344896.1 NC_013599_p6 nuclease phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 3609 3884
YP_003344917.1 NC_013599_p27 Rz phrog_1327 Rz-like spanin lysis 1 20275 20820
YP_003344901.1 NC_013599_p11 hypothetical protein phrog_19269 unknown function unknown function -1 9192 9680
YP_003344905.1 NC_013599_p15 hypothetical protein singleton unknown function unknown function -1 10495 10689
YP_003344911.1 NC_013599_p21 repeat-encoded protein phrog_17048 anti-repressor transcription regulation 1 13916 14572
YP_003344893.1 NC_013599_p3 hypothetical protein singleton unknown function unknown function -1 1659 1823
YP_003344906.1 NC_013599_p16 hypothetical protein phrog_18160 unknown function unknown function -1 10686 11111
YP_003344891.1 NC_013599_p1 integrase phrog_1 integrase integration and excision -1 400 1419
YP_003344913.1 NC_013599_p23 P4 family phage/plasmid primase phrog_16950 DNA primase DNA, RNA and nucleotide metabolism 1 15386 17923
YP_003344919.1 NC_013599_p29 hypothetical protein phrog_38201 unknown function unknown function 1 20817 21131
YP_003344895.1 NC_013599_p5 hypothetical protein singleton unknown function unknown function -1 3235 3612
YP_003344894.1 NC_013599_p4 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 1820 3238
YP_003344928.1 NC_013599_p38 DNA injection protein phrog_598 DNA ejection DNA, RNA and nucleotide metabolism 1 29585 30292
YP_003344903.1 NC_013599_p13 hypothetical protein phrog_16070 unknown function unknown function -1 9906 10100
YP_003344922.1 NC_013599_p32 portal protein phrog_156 portal protein head and packaging 1 22784 24856
YP_003344920.1 NC_013599_p30 hypothetical protein phrog_3900 unknown function unknown function 1 21131 21457
YP_003344910.1 NC_013599_p20 repeat-encoded protein phrog_17048 anti-repressor transcription regulation 1 13656 13919
YP_003344921.1 NC_013599_p31 TerL phrog_2 terminase large subunit head and packaging 1 21369 22781
YP_003344935.1 NC_013599_p45 hypothetical protein phrog_36859 unknown function unknown function 1 35068 36570
YP_003344927.1 NC_013599_p37 hypothetical protein phrog_19101 unknown function unknown function 1 29336 29554
YP_003344924.1 NC_013599_p34 capsid protein phrog_283 major head protein head and packaging 1 25760 26986
YP_003344908.1 NC_013599_p18 hypothetical protein phrog_1244 unknown function unknown function -1 12575 13081
YP_003344931.1 NC_013599_p41 inner membrane protein singleton unknown function unknown function -1 33280 33534
YP_003344929.1 NC_013599_p39 DNA injection protein phrog_25769 unknown function unknown function 1 30296 31504
YP_003344930.1 NC_013599_p40 DNA injection protein phrog_26400 DNA ejection protein DNA, RNA and nucleotide metabolism 1 31508 33283
YP_003344914.1 NC_013599_p24 hypothetical protein phrog_127 anti-termination protein Q-like transcription regulation 1 18744 19451
YP_003344902.1 NC_013599_p12 hypothetical protein phrog_22991 unknown function unknown function -1 9680 9874
YP_003344932.1 NC_013599_p42 inner membrane protein phrog_3996 membrane protein moron, auxiliary metabolic gene and host takeover -1 33548 33898
YP_003344912.1 NC_013599_p22 Bro-N family protein phrog_2593 anti-repressor transcription regulation 1 14682 15248