| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_013643 |
Definition |
Enterococcus phage phiFL2A, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phifelvirus. |
DB of origin |
REFSEQ |
Length |
36270 |
Host Name |
Enterococcus faecalis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
63 |
%GC |
34.6 |
Number of singletons |
7 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_003347348.1 | NC_013643_p57 | hypothetical protein | phrog_1067 | minor head protein | head and packaging | 1 | 29895 | 32015 |
| YP_003347344.1 | NC_013643_p53 | PblA-like tail protein | singleton | unknown function | unknown function | 1 | 25846 | 27276 |
| YP_003347336.1 | NC_013643_p45 | hypothetical protein | phrog_348 | minor head protein | head and packaging | 1 | 21764 | 22045 |
| YP_003347335.1 | NC_013643_p44 | hypothetical protein | phrog_132 | head-tail adaptor | connector | 1 | 21525 | 21767 |
| YP_003347334.1 | NC_013643_p43 | hypothetical protein | phrog_37000 | unknown function | unknown function | 1 | 21383 | 21550 |
| YP_003347347.1 | NC_013643_p56 | tail protein | singleton | unknown function | unknown function | 1 | 29612 | 29881 |
| YP_003347333.1 | NC_013643_p42 | hypothetical protein | phrog_544 | major head protein | head and packaging | 1 | 20373 | 21368 |
| YP_003347339.1 | NC_013643_p48 | major tail protein | phrog_238 | major tail protein | tail | 1 | 22759 | 23415 |
| YP_003347312.1 | NC_013643_p21 | resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 8990 | 9412 |
| YP_003347303.1 | NC_013643_p12 | hypothetical protein | phrog_4384 | unknown function | unknown function | 1 | 4889 | 5062 |
| YP_003347292.1 | NC_013643_p1 | integrase | phrog_95 | integrase | integration and excision | -1 | 1 | 1368 |
| YP_003347346.1 | NC_013643_p55 | tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 29026 | 29637 |
| YP_003347295.1 | NC_013643_p4 | hypothetical protein | phrog_13078 | unknown function | unknown function | 1 | 2485 | 2646 |
| YP_003347311.1 | NC_013643_p20 | recombinase | phrog_2562 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 8002 | 8973 |
| YP_003347308.1 | NC_013643_p17 | endonuclease YqaJ superfamily | phrog_34741 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 6462 | 6707 |
| YP_003347310.1 | NC_013643_p19 | recombinase | phrog_16706 | replisome organizer | DNA, RNA and nucleotide metabolism | 1 | 7710 | 7976 |
| YP_003347314.1 | NC_013643_p23 | hypothetical protein | phrog_5677 | unknown function | unknown function | 1 | 10192 | 10419 |
| YP_003347307.1 | NC_013643_p16 | endonuclease YqaJ superfamily | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism | 1 | 5765 | 6460 |
| YP_003347304.1 | NC_013643_p13 | hypothetical protein | phrog_4690 | unknown function | unknown function | 1 | 5117 | 5440 |
| YP_003347296.1 | NC_013643_p5 | hypothetical protein | singleton | unknown function | unknown function | -1 | 2971 | 3063 |
| YP_003347353.1 | NC_013643_p62 | hypothetical protein | phrog_6837 | unknown function | unknown function | -1 | 35663 | 35914 |
| YP_003347321.1 | NC_013643_p30 | hypothetical protein | phrog_14013 | unknown function | unknown function | 1 | 12858 | 13019 |
| YP_003347330.1 | NC_013643_p39 | hypothetical protein | phrog_8550 | unknown function | unknown function | 1 | 19217 | 19411 |
| YP_003347319.1 | NC_013643_p28 | hypothetical protein | phrog_21580 | unknown function | unknown function | 1 | 12037 | 12294 |
| YP_003347326.1 | NC_013643_p35 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 15269 | 16561 |
| YP_003347305.1 | NC_013643_p14 | hypothetical protein | phrog_3012 | unknown function | unknown function | 1 | 5440 | 5667 |
| YP_003347309.1 | NC_013643_p18 | RecT family protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 6806 | 7696 |
| YP_003347316.1 | NC_013643_p25 | PcfU | phrog_6270 | unknown function | unknown function | 1 | 10942 | 11262 |
| YP_003347297.1 | NC_013643_p6 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 3000 | 3179 |
| YP_003347352.1 | NC_013643_p61 | endolysin | phrog_291 | endolysin | lysis | 1 | 33978 | 35279 |
| YP_003347313.1 | NC_013643_p22 | hypothetical protein | phrog_1799 | unknown function | unknown function | 1 | 9412 | 10167 |
| YP_003347343.1 | NC_013643_p52 | tail protein | phrog_23659 | tail protein | tail | 1 | 25098 | 25778 |
| YP_003347302.1 | NC_013643_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4544 | 4687 |
| YP_003347323.1 | NC_013643_p32 | hypothetical protein | phrog_18457 | unknown function | unknown function | -1 | 13219 | 13410 |
| YP_003347354.1 | NC_013643_p63 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35911 | 36003 |
| YP_003347342.1 | NC_013643_p51 | hypothetical protein | phrog_2567 | unknown function | unknown function | 1 | 24821 | 25093 |
| YP_003347293.1 | NC_013643_p2 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 1470 | 1814 |
| YP_003347306.1 | NC_013643_p15 | hypothetical protein | phrog_15434 | unknown function | unknown function | 1 | 5667 | 5768 |
| YP_003347329.1 | NC_013643_p38 | phage head protein | phrog_115 | minor head protein | head and packaging | 1 | 18313 | 19215 |
| YP_003347324.1 | NC_013643_p33 | transcriptional regulator protein ArpU superfamily | phrog_248 | transcriptional activator | transcription regulation | 1 | 13561 | 14028 |
| YP_003347351.1 | NC_013643_p60 | holin | phrog_881 | holin | lysis | 1 | 33769 | 33975 |
| YP_003347338.1 | NC_013643_p47 | hypothetical protein | phrog_176 | tail terminator | connector | 1 | 22391 | 22747 |
| YP_003347327.1 | NC_013643_p36 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 16578 | 18137 |
| YP_003347332.1 | NC_013643_p41 | scaffold protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 19833 | 20360 |
| YP_003347315.1 | NC_013643_p24 | DNA cytosine methyltransferase | phrog_954 | DNA methyltransferase | other | 1 | 10476 | 10940 |
| YP_003347328.1 | NC_013643_p37 | hypothetical protein | phrog_8955 | unknown function | unknown function | 1 | 18124 | 18300 |
| YP_003347349.1 | NC_013643_p58 | hypothetical protein | phrog_3639 | minor tail protein | tail | 1 | 32012 | 33484 |
| YP_003347337.1 | NC_013643_p46 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 22042 | 22389 |
| YP_003347350.1 | NC_013643_p59 | holin | phrog_689 | holin | lysis | 1 | 33512 | 33766 |
| YP_003347345.1 | NC_013643_p54 | PblA-like tail protein | singleton | unknown function | unknown function | 1 | 27284 | 29014 |
| YP_003347340.1 | NC_013643_p49 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24232 | 24324 |
| YP_003347341.1 | NC_013643_p50 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 24303 | 24779 |
| YP_003347317.1 | NC_013643_p26 | YopX superfamily protein | phrog_98 | unknown function | unknown function | 1 | 11283 | 11654 |
| YP_003347298.1 | NC_013643_p7 | hypothetical protein | phrog_9923 | unknown function | unknown function | 1 | 3190 | 3351 |
| YP_003347331.1 | NC_013643_p40 | hypothetical protein | phrog_8265 | unknown function | unknown function | 1 | 19389 | 19610 |
| YP_003347294.1 | NC_013643_p3 | CI phage repressor protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 1833 | 2165 |
| YP_003347300.1 | NC_013643_p9 | hypothetical protein | phrog_1655 | unknown function | unknown function | 1 | 4026 | 4211 |
| YP_003347299.1 | NC_013643_p8 | anti-repressor protein | phrog_373 | anti-repressor | transcription regulation | 1 | 3323 | 4015 |
| YP_003347320.1 | NC_013643_p29 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 12291 | 12857 |
| YP_003347325.1 | NC_013643_p34 | hypothetical protein | phrog_309 | terminase small subunit | head and packaging | 1 | 14823 | 15272 |
| YP_003347322.1 | NC_013643_p31 | hypothetical protein | phrog_1335 | unknown function | unknown function | 1 | 13019 | 13222 |
| YP_003347301.1 | NC_013643_p10 | hypothetical protein | phrog_4621 | unknown function | unknown function | 1 | 4222 | 4395 |
| YP_003347318.1 | NC_013643_p27 | hypothetical protein | phrog_1150 | unknown function | unknown function | 1 | 11654 | 12013 |