Genomic map of Enterococcus phage phiFL2A (NC_013643)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_013643
Definition
Enterococcus phage phiFL2A, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phifelvirus.
DB of origin
REFSEQ
Length
36270
Host Name
Enterococcus faecalis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
63
%GC
34.6
Number of singletons
7
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_003347348.1 NC_013643_p57 hypothetical protein phrog_1067 minor head protein head and packaging 1 29895 32015
YP_003347344.1 NC_013643_p53 PblA-like tail protein singleton unknown function unknown function 1 25846 27276
YP_003347336.1 NC_013643_p45 hypothetical protein phrog_348 minor head protein head and packaging 1 21764 22045
YP_003347335.1 NC_013643_p44 hypothetical protein phrog_132 head-tail adaptor connector 1 21525 21767
YP_003347334.1 NC_013643_p43 hypothetical protein phrog_37000 unknown function unknown function 1 21383 21550
YP_003347347.1 NC_013643_p56 tail protein singleton unknown function unknown function 1 29612 29881
YP_003347333.1 NC_013643_p42 hypothetical protein phrog_544 major head protein head and packaging 1 20373 21368
YP_003347339.1 NC_013643_p48 major tail protein phrog_238 major tail protein tail 1 22759 23415
YP_003347312.1 NC_013643_p21 resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 8990 9412
YP_003347303.1 NC_013643_p12 hypothetical protein phrog_4384 unknown function unknown function 1 4889 5062
YP_003347292.1 NC_013643_p1 integrase phrog_95 integrase integration and excision -1 1 1368
YP_003347346.1 NC_013643_p55 tail protein phrog_33 distal tail protein Dit tail 1 29026 29637
YP_003347295.1 NC_013643_p4 hypothetical protein phrog_13078 unknown function unknown function 1 2485 2646
YP_003347311.1 NC_013643_p20 recombinase phrog_2562 replication initiation protein DNA, RNA and nucleotide metabolism 1 8002 8973
YP_003347308.1 NC_013643_p17 endonuclease YqaJ superfamily phrog_34741 endonuclease DNA, RNA and nucleotide metabolism 1 6462 6707
YP_003347310.1 NC_013643_p19 recombinase phrog_16706 replisome organizer DNA, RNA and nucleotide metabolism 1 7710 7976
YP_003347314.1 NC_013643_p23 hypothetical protein phrog_5677 unknown function unknown function 1 10192 10419
YP_003347307.1 NC_013643_p16 endonuclease YqaJ superfamily phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 5765 6460
YP_003347304.1 NC_013643_p13 hypothetical protein phrog_4690 unknown function unknown function 1 5117 5440
YP_003347296.1 NC_013643_p5 hypothetical protein singleton unknown function unknown function -1 2971 3063
YP_003347353.1 NC_013643_p62 hypothetical protein phrog_6837 unknown function unknown function -1 35663 35914
YP_003347321.1 NC_013643_p30 hypothetical protein phrog_14013 unknown function unknown function 1 12858 13019
YP_003347330.1 NC_013643_p39 hypothetical protein phrog_8550 unknown function unknown function 1 19217 19411
YP_003347319.1 NC_013643_p28 hypothetical protein phrog_21580 unknown function unknown function 1 12037 12294
YP_003347326.1 NC_013643_p35 terminase large subunit phrog_38 terminase large subunit head and packaging 1 15269 16561
YP_003347305.1 NC_013643_p14 hypothetical protein phrog_3012 unknown function unknown function 1 5440 5667
YP_003347309.1 NC_013643_p18 RecT family protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 6806 7696
YP_003347316.1 NC_013643_p25 PcfU phrog_6270 unknown function unknown function 1 10942 11262
YP_003347297.1 NC_013643_p6 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 3000 3179
YP_003347352.1 NC_013643_p61 endolysin phrog_291 endolysin lysis 1 33978 35279
YP_003347313.1 NC_013643_p22 hypothetical protein phrog_1799 unknown function unknown function 1 9412 10167
YP_003347343.1 NC_013643_p52 tail protein phrog_23659 tail protein tail 1 25098 25778
YP_003347302.1 NC_013643_p11 hypothetical protein singleton unknown function unknown function 1 4544 4687
YP_003347323.1 NC_013643_p32 hypothetical protein phrog_18457 unknown function unknown function -1 13219 13410
YP_003347354.1 NC_013643_p63 hypothetical protein singleton unknown function unknown function -1 35911 36003
YP_003347342.1 NC_013643_p51 hypothetical protein phrog_2567 unknown function unknown function 1 24821 25093
YP_003347293.1 NC_013643_p2 hypothetical protein phrog_87 metallo-protease other -1 1470 1814
YP_003347306.1 NC_013643_p15 hypothetical protein phrog_15434 unknown function unknown function 1 5667 5768
YP_003347329.1 NC_013643_p38 phage head protein phrog_115 minor head protein head and packaging 1 18313 19215
YP_003347324.1 NC_013643_p33 transcriptional regulator protein ArpU superfamily phrog_248 transcriptional activator transcription regulation 1 13561 14028
YP_003347351.1 NC_013643_p60 holin phrog_881 holin lysis 1 33769 33975
YP_003347338.1 NC_013643_p47 hypothetical protein phrog_176 tail terminator connector 1 22391 22747
YP_003347327.1 NC_013643_p36 portal protein phrog_64 portal protein head and packaging 1 16578 18137
YP_003347332.1 NC_013643_p41 scaffold protein phrog_172 head scaffolding protein head and packaging 1 19833 20360
YP_003347315.1 NC_013643_p24 DNA cytosine methyltransferase phrog_954 DNA methyltransferase other 1 10476 10940
YP_003347328.1 NC_013643_p37 hypothetical protein phrog_8955 unknown function unknown function 1 18124 18300
YP_003347349.1 NC_013643_p58 hypothetical protein phrog_3639 minor tail protein tail 1 32012 33484
YP_003347337.1 NC_013643_p46 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 22042 22389
YP_003347350.1 NC_013643_p59 holin phrog_689 holin lysis 1 33512 33766
YP_003347345.1 NC_013643_p54 PblA-like tail protein singleton unknown function unknown function 1 27284 29014
YP_003347340.1 NC_013643_p49 hypothetical protein singleton unknown function unknown function 1 24232 24324
YP_003347341.1 NC_013643_p50 hypothetical protein phrog_183 tail chaperone protein tail 1 24303 24779
YP_003347317.1 NC_013643_p26 YopX superfamily protein phrog_98 unknown function unknown function 1 11283 11654
YP_003347298.1 NC_013643_p7 hypothetical protein phrog_9923 unknown function unknown function 1 3190 3351
YP_003347331.1 NC_013643_p40 hypothetical protein phrog_8265 unknown function unknown function 1 19389 19610
YP_003347294.1 NC_013643_p3 CI phage repressor protein phrog_8 transcriptional regulator transcription regulation -1 1833 2165
YP_003347300.1 NC_013643_p9 hypothetical protein phrog_1655 unknown function unknown function 1 4026 4211
YP_003347299.1 NC_013643_p8 anti-repressor protein phrog_373 anti-repressor transcription regulation 1 3323 4015
YP_003347320.1 NC_013643_p29 hypothetical protein phrog_121 unknown function unknown function 1 12291 12857
YP_003347325.1 NC_013643_p34 hypothetical protein phrog_309 terminase small subunit head and packaging 1 14823 15272
YP_003347322.1 NC_013643_p31 hypothetical protein phrog_1335 unknown function unknown function 1 13019 13222
YP_003347301.1 NC_013643_p10 hypothetical protein phrog_4621 unknown function unknown function 1 4222 4395
YP_003347318.1 NC_013643_p27 hypothetical protein phrog_1150 unknown function unknown function 1 11654 12013