| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_013644 |
Definition |
Enterococcus phage phiFL4A, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
37856 |
Host Name |
Enterococcus faecalis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
55 |
%GC |
37.77 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_003347395.1 | NC_013644_p41 | hypothetical protein | phrog_1236 | head protein | head and packaging | 1 | 25439 | 25981 |
| YP_003347398.1 | NC_013644_p44 | hypothetical protein | phrog_957 | head protein | head and packaging | 1 | 26738 | 27124 |
| YP_003347376.1 | NC_013644_p22 | hypothetical protein | phrog_4188 | unknown function | unknown function | 1 | 11471 | 11611 |
| YP_003347377.1 | NC_013644_p23 | hypothetical protein | phrog_10277 | unknown function | unknown function | 1 | 11624 | 11911 |
| YP_003347360.1 | NC_013644_p6 | hypothetical protein | phrog_1083 | unknown function | unknown function | 1 | 3414 | 3767 |
| YP_003347369.1 | NC_013644_p15 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 6319 | 7491 |
| YP_003347401.1 | NC_013644_p47 | peptide methionine sulfoxide reductase domain-containing protein | phrog_1294 | peptide methionine sulfoxide reductase | other | 1 | 28659 | 28883 |
| YP_003347363.1 | NC_013644_p9 | hypothetical protein | phrog_1654 | unknown function | unknown function | 1 | 4258 | 4458 |
| YP_003347368.1 | NC_013644_p14 | hypothetical protein | phrog_1605 | unknown function | unknown function | 1 | 5837 | 6316 |
| YP_003347362.1 | NC_013644_p8 | hypothetical protein | phrog_1655 | unknown function | unknown function | 1 | 4049 | 4243 |
| YP_003347361.1 | NC_013644_p7 | excisionase | phrog_904 | excisionase | integration and excision | 1 | 3773 | 4045 |
| YP_003347356.1 | NC_013644_p2 | hypothetical protein | phrog_1717 | unknown function | unknown function | -1 | 1371 | 1901 |
| YP_003347389.1 | NC_013644_p35 | phage head protein | phrog_595 | head maturation protease | head and packaging | 1 | 21179 | 22879 |
| YP_003347405.1 | NC_013644_p51 | hypothetical protein | phrog_1220 | head protein | head and packaging | 1 | 34100 | 35107 |
| YP_003347371.1 | NC_013644_p17 | hypothetical protein | phrog_1669 | unknown function | unknown function | 1 | 7755 | 8084 |
| YP_003347375.1 | NC_013644_p21 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 9495 | 11456 |
| YP_003347373.1 | NC_013644_p19 | hypothetical protein | phrog_1548 | unknown function | unknown function | 1 | 8739 | 8963 |
| YP_003347364.1 | NC_013644_p10 | hypothetical protein | phrog_1270 | unknown function | unknown function | 1 | 4464 | 4637 |
| YP_003347388.1 | NC_013644_p34 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 19717 | 21249 |
| YP_003347367.1 | NC_013644_p13 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 5668 | 5850 |
| YP_003347381.1 | NC_013644_p27 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 15049 | 15369 |
| YP_003347374.1 | NC_013644_p20 | hypothetical protein | phrog_1618 | unknown function | unknown function | 1 | 8950 | 9498 |
| YP_003347366.1 | NC_013644_p12 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 4944 | 5624 |
| YP_003347402.1 | NC_013644_p48 | tail tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 28883 | 32116 |
| YP_003347386.1 | NC_013644_p32 | hypothetical protein | phrog_7214 | unknown function | unknown function | 1 | 19286 | 19420 |
| YP_003347357.1 | NC_013644_p3 | hypothetical protein | phrog_1516 | unknown function | unknown function | -1 | 1937 | 2614 |
| YP_003347380.1 | NC_013644_p26 | VirE domain protein | phrog_256 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 12284 | 14716 |
| YP_003347392.1 | NC_013644_p38 | scaffold protein | phrog_194 | head scaffolding protein | head and packaging | 1 | 23694 | 24266 |
| YP_003347393.1 | NC_013644_p39 | capsid protein | phrog_840 | major head protein | head and packaging | 1 | 24282 | 25145 |
| YP_003347407.1 | NC_013644_p53 | holin | phrog_689 | holin | lysis | 1 | 35667 | 35921 |
| YP_003347379.1 | NC_013644_p25 | hypothetical protein | phrog_1874 | unknown function | unknown function | 1 | 12086 | 12265 |
| YP_003347385.1 | NC_013644_p31 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 18013 | 19269 |
| YP_003347403.1 | NC_013644_p49 | tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 32129 | 33004 |
| YP_003347384.1 | NC_013644_p30 | terminase small subunit | phrog_309 | terminase small subunit | head and packaging | 1 | 17450 | 18016 |
| YP_003347383.1 | NC_013644_p29 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 16923 | 17363 |
| YP_003347378.1 | NC_013644_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11899 | 12069 |
| YP_003347397.1 | NC_013644_p43 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 26306 | 26737 |
| YP_003347394.1 | NC_013644_p40 | hypothetical protein | phrog_215 | structural protein with Ig domain | head and packaging | 1 | 25283 | 25435 |
| YP_003347391.1 | NC_013644_p37 | hypothetical protein | phrog_1730 | unknown function | unknown function | 1 | 23258 | 23557 |
| YP_003347365.1 | NC_013644_p11 | hypothetical protein | phrog_1463 | unknown function | unknown function | 1 | 4638 | 4832 |
| YP_003347408.1 | NC_013644_p54 | holin | singleton | holin | lysis | 1 | 35966 | 36130 |
| YP_003347400.1 | NC_013644_p46 | hypothetical protein | phrog_1021 | unknown function | unknown function | 1 | 28129 | 28569 |
| YP_003347372.1 | NC_013644_p18 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 8111 | 8686 |
| YP_003347358.1 | NC_013644_p4 | cI repressor protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2634 | 2996 |
| YP_003347406.1 | NC_013644_p52 | hypothetical protein | phrog_1665 | unknown function | unknown function | 1 | 35108 | 35644 |
| YP_003347382.1 | NC_013644_p28 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 15370 | 16749 |
| YP_003347409.1 | NC_013644_p55 | endolysin | phrog_291 | endolysin | lysis | 1 | 36133 | 37434 |
| YP_003347359.1 | NC_013644_p5 | Cro repressor protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 3122 | 3334 |
| YP_003347396.1 | NC_013644_p42 | hypothetical protein | phrog_1059 | head-tail adaptor | connector | 1 | 25981 | 26319 |
| YP_003347399.1 | NC_013644_p45 | hypothetical protein | phrog_885 | major tail protein | tail | 1 | 27111 | 28070 |
| YP_003347390.1 | NC_013644_p36 | hypothetical protein | phrog_14006 | unknown function | unknown function | 1 | 22876 | 23211 |
| YP_003347387.1 | NC_013644_p33 | hypothetical protein | phrog_3505 | unknown function | unknown function | -1 | 19417 | 19635 |
| YP_003347355.1 | NC_013644_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1215 |
| YP_003347370.1 | NC_013644_p16 | hypothetical protein | phrog_1666 | unknown function | unknown function | 1 | 7497 | 7739 |
| YP_003347404.1 | NC_013644_p50 | hypothetical protein | phrog_538 | minor tail protein | tail | 1 | 33004 | 34089 |