Genomic map of Streptococcus virus phiAbc2 (NC_013645)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_013645
Definition
Streptococcus phage Abc2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Moineauvirus.
DB of origin
REFSEQ
Length
34882
Host Name
Streptococcus thermophilus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
48
%GC
38.98
Number of singletons
3
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_003347457.1 NC_013645_p48 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 34270 34788
YP_003347418.1 NC_013645_p9 tail component protein phrog_5 tail completion or Neck1 protein connector 1 6348 6770
YP_003347413.1 NC_013645_p4 portal protein phrog_12 portal protein head and packaging 1 2639 3799
YP_003347453.1 NC_013645_p44 hypothetical protein phrog_884 unknown function unknown function 1 32385 32687
YP_003347443.1 NC_013645_p34 hypothetical protein phrog_674 unknown function unknown function 1 28181 29152
YP_003347439.1 NC_013645_p30 hypothetical protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 25514 26245
YP_003347440.1 NC_013645_p31 DnaC-like protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 26433 27215
YP_003347432.1 NC_013645_p23 cro-like protein phrog_3 transcriptional repressor transcription regulation 1 22417 22620
YP_003347423.1 NC_013645_p14 tail component protein phrog_4070 tail length tape measure protein tail 1 10779 13397
YP_003347429.1 NC_013645_p20 hypothetical protein phrog_1296 holin lysis 1 20497 20820
YP_003347430.1 NC_013645_p21 holin phrog_297 holin lysis 1 20828 21070
YP_003347437.1 NC_013645_p28 hypothetical protein singleton unknown function unknown function 1 24804 24974
YP_003347411.1 NC_013645_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 567 2438
YP_003347454.1 NC_013645_p45 hypothetical protein phrog_1814 unknown function unknown function 1 32684 33391
YP_003347434.1 NC_013645_p25 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 23587 23790
YP_003347449.1 NC_013645_p40 hypothetical protein phrog_36153 unknown function unknown function 1 30662 30979
YP_003347455.1 NC_013645_p46 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 33738 34037
YP_003347450.1 NC_013645_p41 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision 1 31008 31391
YP_003347425.1 NC_013645_p16 host specificity protein phrog_588 tail fiber protein and host specificity tail 1 14932 17865
YP_003347435.1 NC_013645_p26 phage antirepressor protein phrog_63 anti-repressor Ant transcription regulation 1 23845 24561
YP_003347444.1 NC_013645_p35 single-stranded binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 29149 29601
YP_003347441.1 NC_013645_p32 hypothetical protein phrog_3159 unknown function unknown function 1 27212 27394
YP_003347414.1 NC_013645_p5 scaffolding protein phrog_94 head maturation protease head and packaging 1 3786 4454
YP_003347419.1 NC_013645_p10 tail component protein phrog_1217 tail protein tail 1 6775 7146
YP_003347410.1 NC_013645_p1 terminase small subunit phrog_361 terminase small subunit head and packaging 1 234 545
YP_003347438.1 NC_013645_p29 hypothetical protein phrog_1022 unknown function unknown function 1 25114 25257
YP_003347431.1 NC_013645_p22 lysin phrog_998 endolysin lysis 1 21072 21917
YP_003347426.1 NC_013645_p17 tail protein phrog_372 tail protein tail 1 17866 19887
YP_003347412.1 NC_013645_p3 head-tail joining protein phrog_1142 unknown function unknown function 1 2442 2621
YP_003347447.1 NC_013645_p38 hypothetical protein phrog_803 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 30296 30469
YP_003347433.1 NC_013645_p24 hypothetical protein phrog_1733 unknown function unknown function 1 22661 23488
YP_003347448.1 NC_013645_p39 hypothetical protein phrog_1489 unknown function unknown function 1 30507 30665
YP_003347446.1 NC_013645_p37 hypothetical protein phrog_1982 unknown function unknown function 1 30069 30305
YP_003347445.1 NC_013645_p36 hypothetical protein phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 29611 30072
YP_003347428.1 NC_013645_p19 hypothetical protein phrog_1567 unknown function unknown function 1 20333 20479
YP_003347451.1 NC_013645_p42 hypothetical protein phrog_121 unknown function unknown function 1 31403 31903
YP_003347442.1 NC_013645_p33 Erf protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 27522 28178
YP_003347416.1 NC_013645_p7 DNA packaging protein phrog_40 head-tail adaptor Ad1 connector 1 5677 5991
YP_003347424.1 NC_013645_p15 tail component protein phrog_202 distal tail protein Dit tail 1 13394 14953
YP_003347417.1 NC_013645_p8 capsid-tail joining protein phrog_25 head closure Hc1 connector 1 5991 6341
YP_003347456.1 NC_013645_p47 hypothetical protein singleton unknown function unknown function 1 34030 34158
YP_003347452.1 NC_013645_p43 DNA binding protein phrog_1994 DNA binding protein DNA, RNA and nucleotide metabolism 1 31904 32410
YP_003347420.1 NC_013645_p11 major tail protein phrog_88 major tail protein tail 1 7168 7779
YP_003347427.1 NC_013645_p18 hypothetical protein phrog_1060 unknown function unknown function 1 19903 20313
YP_003347436.1 NC_013645_p27 hypothetical protein singleton unknown function unknown function 1 24571 24720
YP_003347415.1 NC_013645_p6 major capsid protein phrog_10 major head protein head and packaging 1 4469 5662
YP_003347421.1 NC_013645_p12 tail component protein phrog_1346 tail protein tail 1 7854 8207
YP_003347422.1 NC_013645_p13 tail component protein phrog_21157 minor tail protein tail 1 8426 10816