Genomic map of Enterococcus phage phiFL1A (NC_013646)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_013646
Definition
Enterococcus phage phiFL1A, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phifelvirus.
DB of origin
REFSEQ
Length
38764
Host Name
Enterococcus faecalis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
61
%GC
34.01
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_003347491.1 NC_013646_p34 transcriptional regulator ArpU family phrog_248 transcriptional activator transcription regulation 1 13902 14369
YP_003347516.1 NC_013646_p59 holin phrog_881 holin lysis 1 36266 36472
YP_003347490.1 NC_013646_p33 hypothetical protein phrog_18457 unknown function unknown function -1 13560 13751
YP_003347500.1 NC_013646_p43 hypothetical protein phrog_8550 unknown function unknown function 1 21696 21890
YP_003347469.1 NC_013646_p12 hypothetical protein phrog_4384 unknown function unknown function 1 4906 5088
YP_003347479.1 NC_013646_p22 hypothetical protein phrog_9838 unknown function unknown function 1 10189 10332
YP_003347509.1 NC_013646_p52 hypothetical protein phrog_183 tail chaperone protein tail 1 26860 27279
YP_003347478.1 NC_013646_p21 hypothetical protein phrog_1799 unknown function unknown function 1 9435 10196
YP_003347462.1 NC_013646_p5 hypothetical protein phrog_1090 unknown function unknown function -1 2643 2921
YP_003347510.1 NC_013646_p53 hypothetical protein phrog_2567 unknown function unknown function 1 27321 27593
YP_003347458.1 NC_013646_p1 integrase phrog_95 integrase integration and excision -1 1 1368
YP_003347470.1 NC_013646_p13 hypothetical protein phrog_4690 unknown function unknown function 1 5143 5466
YP_003347475.1 NC_013646_p18 recombinase phrog_2562 replication initiation protein DNA, RNA and nucleotide metabolism 1 7735 8697
YP_003347512.1 NC_013646_p55 tail protein phrog_33 distal tail protein Dit tail 1 31524 32378
YP_003347493.1 NC_013646_p36 hypothetical protein phrog_20610 unknown function unknown function 1 15527 15685
YP_003347465.1 NC_013646_p8 anti-repressor protein phrog_373 anti-repressor transcription regulation 1 3301 4011
YP_003347501.1 NC_013646_p44 scaffold protein phrog_172 head scaffolding protein head and packaging 1 22221 22862
YP_003347486.1 NC_013646_p29 hypothetical protein phrog_121 unknown function unknown function 1 12442 12948
YP_003347488.1 NC_013646_p31 hypothetical protein phrog_9982 unknown function unknown function 1 13156 13356
YP_003347505.1 NC_013646_p48 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 24543 24890
YP_003347464.1 NC_013646_p7 hypothetical protein phrog_9923 unknown function unknown function 1 3186 3347
YP_003347499.1 NC_013646_p42 phage head protein phrog_115 minor head protein head and packaging 1 20792 21694
YP_003347497.1 NC_013646_p40 portal protein phrog_64 portal protein head and packaging 1 19057 20616
YP_003347468.1 NC_013646_p11 hypothetical protein phrog_1270 unknown function unknown function 1 4699 4902
YP_003347511.1 NC_013646_p54 PblA-like tail protein phrog_1204 tail protein tail 1 27598 31512
YP_003347463.1 NC_013646_p6 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 2999 3175
YP_003347472.1 NC_013646_p15 hypothetical protein phrog_15434 unknown function unknown function 1 5693 5794
YP_003347474.1 NC_013646_p17 RecT family protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 6831 7721
YP_003347484.1 NC_013646_p27 hypothetical protein phrog_1150 unknown function unknown function 1 11949 12308
YP_003347508.1 NC_013646_p51 hypothetical protein phrog_4417 unknown function unknown function 1 25916 26824
YP_003347481.1 NC_013646_p24 DNA cytosine methyltransferase phrog_954 DNA methyltransferase other 1 10479 10943
YP_003347494.1 NC_013646_p37 hypothetical protein phrog_19788 unknown function unknown function 1 16231 16953
YP_003347460.1 NC_013646_p3 CI phage repressor protein phrog_8 transcriptional regulator transcription regulation -1 1833 2165
YP_003347476.1 NC_013646_p19 DNA binding protein phrog_715 MazG-like pyrophosphatase other 1 8697 8996
YP_003347473.1 NC_013646_p16 endonuclease YqaJ superfamily phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 5791 6732
YP_003347466.1 NC_013646_p9 hypothetical protein phrog_1655 unknown function unknown function 1 4022 4207
YP_003347461.1 NC_013646_p4 hypothetical protein phrog_13078 unknown function unknown function 1 2485 2646
YP_003347515.1 NC_013646_p58 holin phrog_689 holin lysis 1 36009 36263
YP_003347489.1 NC_013646_p32 hypothetical protein phrog_1335 unknown function unknown function 1 13360 13563
YP_003347517.1 NC_013646_p60 endolysin phrog_291 endolysin lysis 1 36475 37776
YP_003347482.1 NC_013646_p25 PcfU phrog_6270 unknown function unknown function 1 10945 11265
YP_003347480.1 NC_013646_p23 hypothetical protein phrog_25257 unknown function unknown function 1 10310 10423
YP_003347514.1 NC_013646_p57 hypothetical protein phrog_3639 minor tail protein tail 1 34509 35981
YP_003347513.1 NC_013646_p56 hypothetical protein phrog_1067 minor head protein head and packaging 1 32392 34512
YP_003347471.1 NC_013646_p14 hypothetical protein phrog_3012 unknown function unknown function 1 5466 5693
YP_003347502.1 NC_013646_p45 hypothetical protein phrog_544 major head protein head and packaging 1 22875 23870
YP_003347477.1 NC_013646_p20 resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 9013 9438
YP_003347492.1 NC_013646_p35 hypothetical protein phrog_8187 unknown function unknown function 1 14900 15514
YP_003347503.1 NC_013646_p46 hypothetical protein phrog_132 head-tail adaptor connector 1 23885 24268
YP_003347459.1 NC_013646_p2 hypothetical protein phrog_87 metallo-protease other -1 1470 1814
YP_003347507.1 NC_013646_p50 major tail protein phrog_238 major tail protein tail 1 25260 25916
YP_003347498.1 NC_013646_p41 hypothetical protein phrog_8955 unknown function unknown function 1 20609 20779
YP_003347504.1 NC_013646_p47 hypothetical protein phrog_348 minor head protein head and packaging 1 24265 24546
YP_003347485.1 NC_013646_p28 hypothetical protein phrog_6739 unknown function unknown function 1 12308 12445
YP_003347496.1 NC_013646_p39 terminase large subunit phrog_2 terminase large subunit head and packaging 1 17799 19040
YP_003347506.1 NC_013646_p49 hypothetical protein phrog_176 tail terminator connector 1 24892 25248
YP_003347467.1 NC_013646_p10 hypothetical protein phrog_4621 unknown function unknown function 1 4218 4391
YP_003347483.1 NC_013646_p26 hypothetical protein phrog_98 unknown function unknown function 1 11286 11654
YP_003347518.1 NC_013646_p61 hypothetical protein phrog_6837 unknown function unknown function -1 38126 38497
YP_003347487.1 NC_013646_p30 hypothetical protein phrog_4960 unknown function unknown function 1 12952 13152
YP_003347495.1 NC_013646_p38 terminase small subunit phrog_1889 terminase small subunit head and packaging 1 17000 17809