| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_013646 |
Definition |
Enterococcus phage phiFL1A, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phifelvirus. |
DB of origin |
REFSEQ |
Length |
38764 |
Host Name |
Enterococcus faecalis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
61 |
%GC |
34.01 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_003347491.1 | NC_013646_p34 | transcriptional regulator ArpU family | phrog_248 | transcriptional activator | transcription regulation | 1 | 13902 | 14369 |
| YP_003347516.1 | NC_013646_p59 | holin | phrog_881 | holin | lysis | 1 | 36266 | 36472 |
| YP_003347490.1 | NC_013646_p33 | hypothetical protein | phrog_18457 | unknown function | unknown function | -1 | 13560 | 13751 |
| YP_003347500.1 | NC_013646_p43 | hypothetical protein | phrog_8550 | unknown function | unknown function | 1 | 21696 | 21890 |
| YP_003347469.1 | NC_013646_p12 | hypothetical protein | phrog_4384 | unknown function | unknown function | 1 | 4906 | 5088 |
| YP_003347479.1 | NC_013646_p22 | hypothetical protein | phrog_9838 | unknown function | unknown function | 1 | 10189 | 10332 |
| YP_003347509.1 | NC_013646_p52 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 26860 | 27279 |
| YP_003347478.1 | NC_013646_p21 | hypothetical protein | phrog_1799 | unknown function | unknown function | 1 | 9435 | 10196 |
| YP_003347462.1 | NC_013646_p5 | hypothetical protein | phrog_1090 | unknown function | unknown function | -1 | 2643 | 2921 |
| YP_003347510.1 | NC_013646_p53 | hypothetical protein | phrog_2567 | unknown function | unknown function | 1 | 27321 | 27593 |
| YP_003347458.1 | NC_013646_p1 | integrase | phrog_95 | integrase | integration and excision | -1 | 1 | 1368 |
| YP_003347470.1 | NC_013646_p13 | hypothetical protein | phrog_4690 | unknown function | unknown function | 1 | 5143 | 5466 |
| YP_003347475.1 | NC_013646_p18 | recombinase | phrog_2562 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 7735 | 8697 |
| YP_003347512.1 | NC_013646_p55 | tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 31524 | 32378 |
| YP_003347493.1 | NC_013646_p36 | hypothetical protein | phrog_20610 | unknown function | unknown function | 1 | 15527 | 15685 |
| YP_003347465.1 | NC_013646_p8 | anti-repressor protein | phrog_373 | anti-repressor | transcription regulation | 1 | 3301 | 4011 |
| YP_003347501.1 | NC_013646_p44 | scaffold protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 22221 | 22862 |
| YP_003347486.1 | NC_013646_p29 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 12442 | 12948 |
| YP_003347488.1 | NC_013646_p31 | hypothetical protein | phrog_9982 | unknown function | unknown function | 1 | 13156 | 13356 |
| YP_003347505.1 | NC_013646_p48 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 24543 | 24890 |
| YP_003347464.1 | NC_013646_p7 | hypothetical protein | phrog_9923 | unknown function | unknown function | 1 | 3186 | 3347 |
| YP_003347499.1 | NC_013646_p42 | phage head protein | phrog_115 | minor head protein | head and packaging | 1 | 20792 | 21694 |
| YP_003347497.1 | NC_013646_p40 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 19057 | 20616 |
| YP_003347468.1 | NC_013646_p11 | hypothetical protein | phrog_1270 | unknown function | unknown function | 1 | 4699 | 4902 |
| YP_003347511.1 | NC_013646_p54 | PblA-like tail protein | phrog_1204 | tail protein | tail | 1 | 27598 | 31512 |
| YP_003347463.1 | NC_013646_p6 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 2999 | 3175 |
| YP_003347472.1 | NC_013646_p15 | hypothetical protein | phrog_15434 | unknown function | unknown function | 1 | 5693 | 5794 |
| YP_003347474.1 | NC_013646_p17 | RecT family protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 6831 | 7721 |
| YP_003347484.1 | NC_013646_p27 | hypothetical protein | phrog_1150 | unknown function | unknown function | 1 | 11949 | 12308 |
| YP_003347508.1 | NC_013646_p51 | hypothetical protein | phrog_4417 | unknown function | unknown function | 1 | 25916 | 26824 |
| YP_003347481.1 | NC_013646_p24 | DNA cytosine methyltransferase | phrog_954 | DNA methyltransferase | other | 1 | 10479 | 10943 |
| YP_003347494.1 | NC_013646_p37 | hypothetical protein | phrog_19788 | unknown function | unknown function | 1 | 16231 | 16953 |
| YP_003347460.1 | NC_013646_p3 | CI phage repressor protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 1833 | 2165 |
| YP_003347476.1 | NC_013646_p19 | DNA binding protein | phrog_715 | MazG-like pyrophosphatase | other | 1 | 8697 | 8996 |
| YP_003347473.1 | NC_013646_p16 | endonuclease YqaJ superfamily | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism | 1 | 5791 | 6732 |
| YP_003347466.1 | NC_013646_p9 | hypothetical protein | phrog_1655 | unknown function | unknown function | 1 | 4022 | 4207 |
| YP_003347461.1 | NC_013646_p4 | hypothetical protein | phrog_13078 | unknown function | unknown function | 1 | 2485 | 2646 |
| YP_003347515.1 | NC_013646_p58 | holin | phrog_689 | holin | lysis | 1 | 36009 | 36263 |
| YP_003347489.1 | NC_013646_p32 | hypothetical protein | phrog_1335 | unknown function | unknown function | 1 | 13360 | 13563 |
| YP_003347517.1 | NC_013646_p60 | endolysin | phrog_291 | endolysin | lysis | 1 | 36475 | 37776 |
| YP_003347482.1 | NC_013646_p25 | PcfU | phrog_6270 | unknown function | unknown function | 1 | 10945 | 11265 |
| YP_003347480.1 | NC_013646_p23 | hypothetical protein | phrog_25257 | unknown function | unknown function | 1 | 10310 | 10423 |
| YP_003347514.1 | NC_013646_p57 | hypothetical protein | phrog_3639 | minor tail protein | tail | 1 | 34509 | 35981 |
| YP_003347513.1 | NC_013646_p56 | hypothetical protein | phrog_1067 | minor head protein | head and packaging | 1 | 32392 | 34512 |
| YP_003347471.1 | NC_013646_p14 | hypothetical protein | phrog_3012 | unknown function | unknown function | 1 | 5466 | 5693 |
| YP_003347502.1 | NC_013646_p45 | hypothetical protein | phrog_544 | major head protein | head and packaging | 1 | 22875 | 23870 |
| YP_003347477.1 | NC_013646_p20 | resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 9013 | 9438 |
| YP_003347492.1 | NC_013646_p35 | hypothetical protein | phrog_8187 | unknown function | unknown function | 1 | 14900 | 15514 |
| YP_003347503.1 | NC_013646_p46 | hypothetical protein | phrog_132 | head-tail adaptor | connector | 1 | 23885 | 24268 |
| YP_003347459.1 | NC_013646_p2 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 1470 | 1814 |
| YP_003347507.1 | NC_013646_p50 | major tail protein | phrog_238 | major tail protein | tail | 1 | 25260 | 25916 |
| YP_003347498.1 | NC_013646_p41 | hypothetical protein | phrog_8955 | unknown function | unknown function | 1 | 20609 | 20779 |
| YP_003347504.1 | NC_013646_p47 | hypothetical protein | phrog_348 | minor head protein | head and packaging | 1 | 24265 | 24546 |
| YP_003347485.1 | NC_013646_p28 | hypothetical protein | phrog_6739 | unknown function | unknown function | 1 | 12308 | 12445 |
| YP_003347496.1 | NC_013646_p39 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 17799 | 19040 |
| YP_003347506.1 | NC_013646_p49 | hypothetical protein | phrog_176 | tail terminator | connector | 1 | 24892 | 25248 |
| YP_003347467.1 | NC_013646_p10 | hypothetical protein | phrog_4621 | unknown function | unknown function | 1 | 4218 | 4391 |
| YP_003347483.1 | NC_013646_p26 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 11286 | 11654 |
| YP_003347518.1 | NC_013646_p61 | hypothetical protein | phrog_6837 | unknown function | unknown function | -1 | 38126 | 38497 |
| YP_003347487.1 | NC_013646_p30 | hypothetical protein | phrog_4960 | unknown function | unknown function | 1 | 12952 | 13152 |
| YP_003347495.1 | NC_013646_p38 | terminase small subunit | phrog_1889 | terminase small subunit | head and packaging | 1 | 17000 | 17809 |