| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_013648 |
Definition |
Enterococcus phage phiFL3A, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phifelvirus. |
DB of origin |
REFSEQ |
Length |
39576 |
Host Name |
Enterococcus faecalis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
64 |
%GC |
34.54 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_003347584.1 | NC_013648_p22 | ArpR DNA binding protein | phrog_715 | MazG-like pyrophosphatase | other | 1 | 9495 | 9794 |
| YP_003347621.1 | NC_013648_p59 | hypothetical protein | phrog_9321 | unknown function | unknown function | 1 | 35640 | 35768 |
| YP_003347581.1 | NC_013648_p19 | RecT family protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 7409 | 8212 |
| YP_003347620.1 | NC_013648_p58 | PblB-like tail protein | phrog_6616 | tail protein | tail | 1 | 33203 | 35620 |
| YP_003347572.1 | NC_013648_p10 | hypothetical protein | phrog_4621 | unknown function | unknown function | 1 | 4218 | 4391 |
| YP_003347589.1 | NC_013648_p27 | hypothetical protein | phrog_32211 | unknown function | unknown function | 1 | 12256 | 12441 |
| YP_003347583.1 | NC_013648_p21 | hypothetical protein | phrog_154 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 9192 | 9494 |
| YP_003347614.1 | NC_013648_p52 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 26566 | 26928 |
| YP_003347609.1 | NC_013648_p47 | scaffold protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 23653 | 24303 |
| YP_003347592.1 | NC_013648_p30 | hypothetical protein | phrog_1150 | unknown function | unknown function | 1 | 13181 | 13531 |
| YP_003347626.1 | NC_013648_p64 | hypothetical protein | phrog_6837 | unknown function | unknown function | -1 | 38938 | 39309 |
| YP_003347613.1 | NC_013648_p51 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 26030 | 26569 |
| YP_003347619.1 | NC_013648_p57 | hypothetical protein | phrog_1194 | unknown function | unknown function | 1 | 32821 | 33186 |
| YP_003347624.1 | NC_013648_p62 | holin | phrog_297 | holin | lysis | 1 | 37096 | 37332 |
| YP_003347564.1 | NC_013648_p2 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 1470 | 1814 |
| YP_003347573.1 | NC_013648_p11 | hypothetical protein | phrog_3292 | unknown function | unknown function | -1 | 4392 | 4598 |
| YP_003347582.1 | NC_013648_p20 | recombinase | phrog_2562 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 8226 | 9188 |
| YP_003347575.1 | NC_013648_p13 | hypothetical protein | phrog_24197 | unknown function | unknown function | 1 | 4886 | 4984 |
| YP_003347604.1 | NC_013648_p42 | terminase large subunit | phrog_3717 | terminase large subunit | head and packaging | 1 | 19326 | 20045 |
| YP_003347590.1 | NC_013648_p28 | hypothetical protein | phrog_6159 | unknown function | unknown function | 1 | 12635 | 12814 |
| YP_003347576.1 | NC_013648_p14 | hypothetical protein | phrog_20727 | unknown function | unknown function | -1 | 4981 | 5151 |
| YP_003347608.1 | NC_013648_p46 | head protein | phrog_115 | minor head protein | head and packaging | 1 | 22344 | 23492 |
| YP_003347598.1 | NC_013648_p36 | DNA adenine methyltransferase | phrog_498 | DNA methyltransferase | other | 1 | 16325 | 17659 |
| YP_003347611.1 | NC_013648_p49 | hypothetical protein | phrog_132 | head-tail adaptor | connector | 1 | 25370 | 25708 |
| YP_003347605.1 | NC_013648_p43 | terminase large subunit | phrog_5653 | terminase large subunit | head and packaging | 1 | 20020 | 20610 |
| YP_003347587.1 | NC_013648_p25 | hypothetical protein | phrog_5677 | unknown function | unknown function | 1 | 11013 | 11240 |
| YP_003347574.1 | NC_013648_p12 | hypothetical protein | phrog_1270 | unknown function | unknown function | 1 | 4699 | 4893 |
| YP_003347588.1 | NC_013648_p26 | DNA cytosine methyltransferase | phrog_116 | DNA methyltransferase | other | 1 | 11297 | 12250 |
| YP_003347623.1 | NC_013648_p61 | hypothetical protein | phrog_5620 | unknown function | unknown function | 1 | 36882 | 37103 |
| YP_003347610.1 | NC_013648_p48 | coat protein | phrog_247 | major head protein | head and packaging | 1 | 24319 | 25356 |
| YP_003347617.1 | NC_013648_p55 | hypothetical protein | phrog_2066 | unknown function | unknown function | 1 | 27906 | 28265 |
| YP_003347599.1 | NC_013648_p37 | hypothetical protein | phrog_10302 | unknown function | unknown function | 1 | 17697 | 17888 |
| YP_003347602.1 | NC_013648_p40 | terminase small subunit | phrog_30332 | unknown function | unknown function | 1 | 18465 | 18908 |
| YP_003347591.1 | NC_013648_p29 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 12798 | 13184 |
| YP_003347601.1 | NC_013648_p39 | hypothetical protein | phrog_34812 | unknown function | unknown function | 1 | 18289 | 18447 |
| YP_003347570.1 | NC_013648_p8 | anti-repressor protein | phrog_373 | anti-repressor | transcription regulation | 1 | 3301 | 4011 |
| YP_003347563.1 | NC_013648_p1 | integrase | phrog_95 | integrase | integration and excision | -1 | 1 | 1368 |
| YP_003347596.1 | NC_013648_p34 | transcriptional regulator | phrog_248 | transcriptional activator | transcription regulation | 1 | 14717 | 15133 |
| YP_003347625.1 | NC_013648_p63 | endolysin | phrog_291 | endolysin | lysis | 1 | 37329 | 38588 |
| YP_003347593.1 | NC_013648_p31 | hypothetical protein | phrog_6739 | unknown function | unknown function | 1 | 13531 | 13668 |
| YP_003347569.1 | NC_013648_p7 | hypothetical protein | phrog_9923 | unknown function | unknown function | 1 | 3186 | 3347 |
| YP_003347571.1 | NC_013648_p9 | hypothetical protein | phrog_1655 | unknown function | unknown function | 1 | 4022 | 4207 |
| YP_003347579.1 | NC_013648_p17 | hypothetical protein | phrog_4690 | unknown function | unknown function | 1 | 5769 | 6092 |
| YP_003347566.1 | NC_013648_p4 | hypothetical protein | phrog_13078 | unknown function | unknown function | 1 | 2485 | 2646 |
| YP_003347600.1 | NC_013648_p38 | hypothetical protein | phrog_1476 | unknown function | unknown function | 1 | 18024 | 18212 |
| YP_003347578.1 | NC_013648_p16 | hypothetical protein | phrog_4384 | unknown function | unknown function | 1 | 5541 | 5726 |
| YP_003347577.1 | NC_013648_p15 | transcriptional regulator | phrog_3 | transcriptional repressor | transcription regulation | 1 | 5284 | 5520 |
| YP_003347616.1 | NC_013648_p54 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 27463 | 27873 |
| YP_003347603.1 | NC_013648_p41 | terminase small subunit | singleton | unknown function | unknown function | 1 | 18962 | 19333 |
| YP_003347594.1 | NC_013648_p32 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 13665 | 14189 |
| YP_003347595.1 | NC_013648_p33 | hypothetical protein | phrog_1335 | unknown function | unknown function | 1 | 14372 | 14572 |
| YP_003347586.1 | NC_013648_p24 | hypothetical protein | phrog_1799 | unknown function | unknown function | 1 | 10233 | 10988 |
| YP_003347622.1 | NC_013648_p60 | hypothetical protein | phrog_3971 | unknown function | unknown function | 1 | 35780 | 36802 |
| YP_003347567.1 | NC_013648_p5 | hypothetical protein | phrog_1090 | unknown function | unknown function | -1 | 2643 | 2921 |
| YP_003347568.1 | NC_013648_p6 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 2999 | 3175 |
| YP_003347612.1 | NC_013648_p50 | hypothetical protein | phrog_2168 | unknown function | unknown function | 1 | 25689 | 26030 |
| YP_003347607.1 | NC_013648_p45 | ribosomal protein | phrog_4478 | peptidase | other | 1 | 22032 | 22343 |
| YP_003347597.1 | NC_013648_p35 | hypothetical protein | phrog_26482 | unknown function | unknown function | 1 | 16026 | 16277 |
| YP_003347585.1 | NC_013648_p23 | resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 9811 | 10233 |
| YP_003347618.1 | NC_013648_p56 | SLT domain protein | phrog_1535 | tail length tape measure protein | tail | 1 | 28275 | 32810 |
| YP_003347565.1 | NC_013648_p3 | CI phage repressor protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 1833 | 2165 |
| YP_003347606.1 | NC_013648_p44 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 20624 | 22051 |
| YP_003347580.1 | NC_013648_p18 | endonuclease YqaJ superfamily | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism | 1 | 6438 | 7319 |
| YP_003347615.1 | NC_013648_p53 | tail protein | phrog_158 | major tail protein | tail | 1 | 26948 | 27406 |