Genomic map of Vibrio phage N4 (NC_013651)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_013651
Definition
Vibrio phage N4, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Chatterjeevirus; Vibrio virus N4.
DB of origin
REFSEQ
Length
38497
Host Name
Vibrio
Host domain
Bacteria
Is prophage?
undef
Number of proteins
47
%GC
42.8
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_003347902.1 NC_013651_p2 hypothetical protein phrog_28061 unknown function unknown function 1 940 1122
YP_003347924.1 NC_013651_p24 ssDNA-binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 15513 16184
YP_003347907.1 NC_013651_p7 host RNA polymerase inhibitory protein phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 6420 6545
YP_003347913.1 NC_013651_p13 hypothetical protein phrog_10688 unknown function unknown function 1 9664 9978
YP_003347920.1 NC_013651_p20 hypothetical protein phrog_11673 unknown function unknown function 1 13794 13985
YP_003347926.1 NC_013651_p26 lysozyme phrog_822 amidase lysis 1 16636 17070
YP_003347934.1 NC_013651_p34 tail tubular protein B phrog_457 tail protein tail 1 22977 25361
YP_003347903.1 NC_013651_p3 RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 1169 3820
YP_003347941.1 NC_013651_p41 lysis protein phrog_920 holin lysis 1 34689 34883
YP_003347908.1 NC_013651_p8 hypothetical protein phrog_11648 unknown function unknown function 1 6715 6867
YP_003347939.1 NC_013651_p39 internal virion protein D phrog_342 internal virion protein with endolysin domain head and packaging 1 29427 32810
YP_003347914.1 NC_013651_p14 hypothetical protein phrog_10620 unknown function unknown function 1 10064 10528
YP_003347905.1 NC_013651_p5 hypothetical protein phrog_11350 unknown function unknown function 1 5309 5635
YP_003347945.1 NC_013651_p45 hypothetical protein phrog_10167 unknown function unknown function 1 35760 35957
YP_003347936.1 NC_013651_p36 internal virion protein A phrog_308 internal virion protein head and packaging 1 26074 26592
YP_003347930.1 NC_013651_p30 head-to-tail joining protein phrog_449 head-tail adaptor connector 1 18506 20104
YP_003347919.1 NC_013651_p19 hypothetical protein phrog_10513 unknown function unknown function 1 13415 13807
YP_003347909.1 NC_013651_p9 hypothetical protein phrog_10197 unknown function unknown function 1 6906 7187
YP_003347917.1 NC_013651_p17 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 11074 13110
YP_003347940.1 NC_013651_p40 tail fiber protein phrog_6256 tail fiber protein tail 1 32890 34674
YP_003347912.1 NC_013651_p12 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 7897 9603
YP_003347922.1 NC_013651_p22 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 14318 15181
YP_003347901.1 NC_013651_p1 S-adenosyl-L-methionine hydrolase phrog_2226 SAM-dependent methyltransferase other 1 509 940
YP_003347937.1 NC_013651_p37 internal virion protein B phrog_805 internal virion protein head and packaging 1 26579 27169
YP_003347944.1 NC_013651_p44 hypothetical protein phrog_4712 holin lysis 1 35617 35760
YP_003347916.1 NC_013651_p16 13.5 kDa protein phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism 1 10779 11090
YP_003347911.1 NC_013651_p11 hypothetical protein phrog_11152 unknown function unknown function 1 7703 7900
YP_003347925.1 NC_013651_p25 endonuclease phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 16184 16636
YP_003347923.1 NC_013651_p23 hypothetical protein singleton unknown function unknown function 1 15169 15420
YP_003347915.1 NC_013651_p15 hypothetical protein phrog_10848 unknown function unknown function 1 10515 10772
YP_003347933.1 NC_013651_p33 tail tubular protein A phrog_446 tail protein tail 1 22372 22965
YP_003347928.1 NC_013651_p28 host specificity protein A phrog_2746 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 17791 18198
YP_003347938.1 NC_013651_p38 internal virion protein C phrog_1339 internal virion protein head and packaging 1 27201 29414
YP_003347904.1 NC_013651_p4 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 4003 5013
YP_003347947.1 NC_013651_p47 hypothetical protein phrog_19284 unknown function unknown function 1 38031 38162
YP_003347932.1 NC_013651_p32 major capsid protein phrog_267 major head protein head and packaging 1 21182 22306
YP_003347946.1 NC_013651_p46 DNA packaging/maturation protein B phrog_38 terminase large subunit head and packaging 1 36066 37784
YP_003347927.1 NC_013651_p27 hypothetical protein phrog_1391 unknown function unknown function 1 17504 17755
YP_003347929.1 NC_013651_p29 host specificity protein B phrog_10099 unknown function unknown function 1 18198 18488
YP_003347906.1 NC_013651_p6 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other 1 5647 6330
YP_003347910.1 NC_013651_p10 hypothetical protein phrog_5138 unknown function unknown function 1 7203 7598
YP_003347921.1 NC_013651_p21 5.7 kDa protein phrog_1334 unknown function unknown function 1 14121 14318
YP_003347918.1 NC_013651_p18 hypothetical protein phrog_10985 unknown function unknown function 1 13121 13285
YP_003347935.1 NC_013651_p35 deoxyribonucleoside kinase phrog_761 thymidylate kinase other 1 25449 26081
YP_003347931.1 NC_013651_p31 capsid assembly protein phrog_1052 head assembly head and packaging 1 20184 21062
YP_003347943.1 NC_013651_p43 DNA packaging/maturation protein A phrog_1351 terminase small subunit head and packaging 1 35365 35598
YP_003347942.1 NC_013651_p42 hypothetical protein phrog_12315 unknown function unknown function 1 34883 35353