Genomic map of Streptomyces phage phiSASD1 (NC_014229)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_014229
Definition
Streptomyces phage phiSASD1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
37068
Host Name
Streptomyces avermitilis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
43
%GC
66.25
Number of singletons
11
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_003714731.1 NC_014229_p4 hypothetical protein phrog_1522 head maturation protease head and packaging 1 3643 4287
YP_003714742.1 NC_014229_p15 hypothetical protein singleton unknown function unknown function 1 8991 9709
YP_003714763.1 NC_014229_p36 hypothetical protein phrog_15865 RNA polymerase sigma factor transcription regulation 1 30375 31697
YP_003714739.1 NC_014229_p12 TP901-1_ORF40 superfamily protein phrog_5 tail completion or Neck1 protein connector 1 7773 8141
YP_003714735.1 NC_014229_p8 hypothetical protein phrog_24810 unknown function unknown function 1 6309 6491
YP_003714769.1 NC_014229_p42 holin phrog_3555 unknown function unknown function 1 36222 36452
YP_003714754.1 NC_014229_p27 HIT family protein phrog_19494 unknown function unknown function 1 21332 21664
YP_003714737.1 NC_014229_p10 hypothetical protein singleton unknown function unknown function 1 7168 7437
YP_003714733.1 NC_014229_p6 hypothetical protein phrog_4708 head scaffolding protein head and packaging 1 4637 5314
YP_003714756.1 NC_014229_p29 hypothetical protein phrog_9220 unknown function unknown function 1 22365 23072
YP_003714762.1 NC_014229_p35 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 28284 30140
YP_003714758.1 NC_014229_p31 hypothetical protein singleton unknown function unknown function 1 23951 24565
YP_003714743.1 NC_014229_p16 hypothetical protein phrog_344 tail assembly chaperone tail 1 8991 9356
YP_003714736.1 NC_014229_p9 hypothetical protein phrog_442 head-tail adaptor connector 1 6506 7102
YP_003714764.1 NC_014229_p37 hypothetical protein singleton unknown function unknown function 1 31790 32200
YP_003714745.1 NC_014229_p18 hypothetical protein phrog_5313 unknown function unknown function 1 11644 14799
YP_003714757.1 NC_014229_p30 hypothetical protein singleton unknown function unknown function 1 23075 23248
YP_003714761.1 NC_014229_p34 primase/helicase phrog_6088 DNA primase DNA, RNA and nucleotide metabolism 1 25621 28125
YP_003714740.1 NC_014229_p13 hypothetical protein phrog_176 tail terminator connector 1 8110 8547
YP_003714744.1 NC_014229_p17 minor tail protein phrog_305 tail length tape measure protein tail 1 9706 11628
YP_003714767.1 NC_014229_p40 HNH endonuclease phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 34426 35082
YP_003714765.1 NC_014229_p38 hypothetical protein singleton unknown function unknown function 1 32286 33056
YP_003714748.1 NC_014229_p21 hypothetical protein phrog_5225 unknown function unknown function 1 17450 17689
YP_003714760.1 NC_014229_p33 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 25051 25515
YP_003714755.1 NC_014229_p28 hypothetical protein phrog_1106 unknown function unknown function 1 21806 22309
YP_003714738.1 NC_014229_p11 tail-related protein phrog_16194 tail protein tail 1 7450 7773
YP_003714728.1 NC_014229_p1 hypothetical protein phrog_226 minor tail protein tail 1 188 565
YP_003714732.1 NC_014229_p5 hypothetical protein singleton unknown function unknown function 1 4277 4546
YP_003714734.1 NC_014229_p7 capsid protein phrog_267 major head protein head and packaging 1 5351 6226
YP_003714768.1 NC_014229_p41 hypothetical protein singleton unknown function unknown function 1 35149 35535
YP_003714750.1 NC_014229_p23 dNMP kinase phrog_139 deoxynucleoside monophosphate kinase other 1 17942 18490
YP_003714751.1 NC_014229_p24 hypothetical protein phrog_298 exonuclease DNA, RNA and nucleotide metabolism 1 19051 19908
YP_003714741.1 NC_014229_p14 major tail protein phrog_158 major tail protein tail 1 8565 8987
YP_003714759.1 NC_014229_p32 hypothetical protein phrog_15072 unknown function unknown function 1 24653 24847
YP_003714749.1 NC_014229_p22 hypothetical protein phrog_18607 unknown function unknown function 1 17697 17885
YP_003714753.1 NC_014229_p26 AANH-like superfamily protein phrog_424 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover 1 20337 21287
YP_003714730.1 NC_014229_p3 portal protein phrog_104 portal protein head and packaging 1 2181 3668
YP_003714746.1 NC_014229_p19 hypothetical protein phrog_2234 tail spike protein tail 1 14866 16452
YP_003714770.1 NC_014229_p43 hypothetical protein singleton unknown function unknown function 1 36449 36649
YP_003714747.1 NC_014229_p20 endolysin phrog_17214 endolysin lysis 1 16596 17432
YP_003714766.1 NC_014229_p39 integrase singleton unknown function unknown function 1 33088 33852
YP_003714729.1 NC_014229_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 558 2168
YP_003714752.1 NC_014229_p25 hypothetical protein singleton unknown function unknown function 1 19905 20138