Genomic map of Mycobacterium virus Angelica (NC_014458)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_014458
Definition
Mycobacterium phage Angelica, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus.
DB of origin
REFSEQ
Length
59598
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
66.38
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_003856963.1 NC_014458_p84 hypothetical protein phrog_2493 unknown function unknown function 1 55387 55920
YP_003856909.1 NC_014458_p30 LysB phrog_102 endolysin lysis 1 26428 27282
YP_003856884.1 NC_014458_p5 hypothetical protein phrog_2622 unknown function unknown function 1 1171 1371
YP_003856894.1 NC_014458_p15 hypothetical protein phrog_387 neck protein connector 1 9672 9953
YP_003856886.1 NC_014458_p7 terminase phrog_2 terminase large subunit head and packaging 1 1575 2996
YP_003856933.1 NC_014458_p54 hypothetical protein phrog_1956 unknown function unknown function 1 39652 39930
YP_003856959.1 NC_014458_p80 hypothetical protein phrog_6426 unknown function unknown function 1 52934 53146
YP_003856965.1 NC_014458_p86 hypothetical protein phrog_5812 unknown function unknown function 1 56249 57070
YP_003856924.1 NC_014458_p45 hypothetical protein phrog_2908 unknown function unknown function 1 35893 36243
YP_003856936.1 NC_014458_p57 hypothetical protein phrog_2596 unknown function unknown function 1 40695 40961
YP_003856899.1 NC_014458_p20 tape measure phrog_971 endolysin lysis 1 12050 15883
YP_003856905.1 NC_014458_p26 hypothetical protein phrog_346 minor tail protein tail 1 20846 23278
YP_003856913.1 NC_014458_p34 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 28309 29517
YP_003856888.1 NC_014458_p9 protease phrog_1752 head maturation protease head and packaging 1 4566 7073
YP_003856890.1 NC_014458_p11 scaffold phrog_1793 head scaffolding protein head and packaging 1 7293 7826
YP_003856896.1 NC_014458_p17 major tail protein phrog_117 major tail protein tail 1 10475 11089
YP_003856891.1 NC_014458_p12 capsid phrog_10 major head protein head and packaging 1 7902 8840
YP_003856908.1 NC_014458_p29 LysA phrog_1519 endolysin lysis 1 24776 26431
YP_003856897.1 NC_014458_p18 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 11203 12050
YP_003856973.1 NC_014458_p94 HNH phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 59237 59539
YP_003856956.1 NC_014458_p77 hypothetical protein phrog_3868 unknown function unknown function 1 51899 52375
YP_003856951.1 NC_014458_p72 hypothetical protein phrog_4269 unknown function unknown function 1 49888 50121
YP_003856915.1 NC_014458_p36 hypothetical protein phrog_4112 unknown function unknown function 1 30126 30416
YP_003856902.1 NC_014458_p23 hypothetical protein phrog_1697 minor tail protein tail 1 18888 19364
YP_003856917.1 NC_014458_p38 hypothetical protein phrog_4095 unknown function unknown function 1 31296 31985
YP_003856934.1 NC_014458_p55 hypothetical protein phrog_4832 unknown function unknown function 1 39927 40130
YP_003856904.1 NC_014458_p25 hypothetical protein phrog_1736 minor tail protein tail 1 20537 20845
YP_003856938.1 NC_014458_p59 hypothetical protein phrog_1498 unknown function unknown function 1 41275 41439
YP_003856919.1 NC_014458_p40 Y-integrase phrog_1 integrase integration and excision 1 32708 33796
YP_003856957.1 NC_014458_p78 hypothetical protein phrog_5794 unknown function unknown function 1 52375 52740
YP_003856946.1 NC_014458_p67 DNA primase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 44312 46930
YP_003856889.1 NC_014458_p10 hypothetical protein phrog_1757 unknown function unknown function 1 7070 7255
YP_003856950.1 NC_014458_p71 peptidase phrog_908 unknown function unknown function 1 48688 49875
YP_003856935.1 NC_014458_p56 DnaQ phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 40141 40695
YP_003856972.1 NC_014458_p93 hypothetical protein phrog_5633 unknown function unknown function 1 59058 59240
YP_003856881.1 NC_014458_p2 hypothetical protein phrog_5284 unknown function unknown function 1 294 479
YP_003856954.1 NC_014458_p75 hypothetical protein phrog_5776 unknown function unknown function 1 50875 51006
YP_003856964.1 NC_014458_p85 hypothetical protein phrog_3665 unknown function unknown function 1 55917 56078
YP_003856895.1 NC_014458_p16 hypothetical protein phrog_123 tail terminator connector 1 9950 10375
YP_003856969.1 NC_014458_p90 hypothetical protein phrog_6135 unknown function unknown function 1 58163 58426
YP_003856928.1 NC_014458_p49 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 37583 37846
YP_003856961.1 NC_014458_p82 hypothetical protein phrog_3167 unknown function unknown function 1 54442 54828
YP_003856968.1 NC_014458_p89 hypothetical protein phrog_4560 unknown function unknown function 1 57785 58054
YP_003856925.1 NC_014458_p46 hypothetical protein phrog_2654 unknown function unknown function 1 36422 36589
YP_003856953.1 NC_014458_p74 hypothetical protein phrog_2974 unknown function unknown function 1 50513 50788
YP_003856921.1 NC_014458_p42 hypothetical protein phrog_1746 transcriptional repressor transcription regulation -1 34829 35209
YP_003856939.1 NC_014458_p60 hypothetical protein phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 41436 42323
YP_003856945.1 NC_014458_p66 hypothetical protein phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43899 44270
YP_003856947.1 NC_014458_p68 RusA phrog_3055 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 47327 48037
YP_003856967.1 NC_014458_p88 hypothetical protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 57421 57636
YP_003856918.1 NC_014458_p39 hypothetical protein phrog_658 unknown function unknown function -1 32048 32350
YP_003856949.1 NC_014458_p70 hypothetical protein phrog_6689 unknown function unknown function 1 48488 48691
YP_003856911.1 NC_014458_p32 hypothetical protein phrog_3413 unknown function unknown function 1 27736 28074
YP_003856907.1 NC_014458_p28 phi:0000326 - phage function unknown phrog_240 head protein head and packaging 1 24387 24758
YP_003856926.1 NC_014458_p47 hypothetical protein phrog_3903 unknown function unknown function 1 36586 36798
YP_003856940.1 NC_014458_p61 hypothetical protein phrog_3492 unknown function unknown function 1 42320 42553
YP_003856912.1 NC_014458_p33 hypothetical protein phrog_1738 unknown function unknown function 1 28071 28322
YP_003856898.1 NC_014458_p19 tail assembly chaperone phrog_1861 unknown function unknown function 1 11203 11640
YP_003856960.1 NC_014458_p81 RtcB phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 53258 54445
YP_003856916.1 NC_014458_p37 hypothetical protein phrog_2433 unknown function unknown function 1 30492 31181
YP_003856882.1 NC_014458_p3 hypothetical protein phrog_2074 unknown function unknown function 1 476 730
YP_003856887.1 NC_014458_p8 portal phrog_104 portal protein head and packaging 1 3008 4561
YP_003856892.1 NC_014458_p13 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 8952 9338
YP_003856930.1 NC_014458_p51 hypothetical protein phrog_542 unknown function unknown function 1 38715 38885
YP_003856931.1 NC_014458_p52 hypothetical protein phrog_301 secreted protein other 1 38918 39268
YP_003856943.1 NC_014458_p64 hypothetical protein phrog_1911 unknown function unknown function 1 43046 43555
YP_003856958.1 NC_014458_p79 hypothetical protein phrog_666 unknown function unknown function 1 52740 52937
YP_003856906.1 NC_014458_p27 hypothetical protein phrog_416 minor tail protein tail 1 23290 24303
YP_003856885.1 NC_014458_p6 hypothetical protein phrog_1459 terminase small subunit head and packaging 1 1364 1591
YP_003856893.1 NC_014458_p14 hypothetical protein phrog_763 head-tail adaptor connector 1 9335 9691
YP_003856920.1 NC_014458_p41 hypothetical protein phrog_950 unknown function unknown function -1 33899 34792
YP_003856966.1 NC_014458_p87 hypothetical protein phrog_5243 unknown function unknown function 1 57102 57299
YP_003856971.1 NC_014458_p92 hypothetical protein phrog_4561 unknown function unknown function 1 58831 59061
YP_003856922.1 NC_014458_p43 hypothetical protein phrog_1702 transcriptional repressor transcription regulation 1 35389 35628
YP_003856952.1 NC_014458_p73 hypothetical protein phrog_1338 unknown function unknown function 1 50118 50390
YP_003856962.1 NC_014458_p83 hypothetical protein phrog_2822 unknown function unknown function 1 54828 55379
YP_003856941.1 NC_014458_p62 hypothetical protein phrog_1581 unknown function unknown function 1 42629 42844
YP_003856948.1 NC_014458_p69 hypothetical protein phrog_3478 unknown function unknown function 1 48030 48491
YP_003856927.1 NC_014458_p48 hypothetical protein phrog_2286 unknown function unknown function 1 36795 37586
YP_003856942.1 NC_014458_p63 hypothetical protein phrog_2388 unknown function unknown function 1 42844 42963
YP_003856970.1 NC_014458_p91 hypothetical protein phrog_13379 unknown function unknown function 1 58503 58850
YP_003856910.1 NC_014458_p31 hypothetical protein phrog_565 holin lysis 1 27293 27733
YP_003856880.1 NC_014458_p1 hypothetical protein phrog_4624 unknown function unknown function 1 79 297
YP_003856903.1 NC_014458_p24 minor tail subunit phrog_1565 minor tail protein tail 1 19448 20530
YP_003856955.1 NC_014458_p76 hypothetical protein phrog_2342 unknown function unknown function 1 51003 51902
YP_003856929.1 NC_014458_p50 hypothetical protein phrog_2781 unknown function unknown function 1 37843 38703
YP_003856883.1 NC_014458_p4 hypothetical protein phrog_2293 unknown function unknown function 1 727 945
YP_003856923.1 NC_014458_p44 hypothetical protein phrog_1840 excisionase integration and excision 1 35625 35891
YP_003856932.1 NC_014458_p53 hypothetical protein phrog_3186 unknown function unknown function 1 39265 39633
YP_003856937.1 NC_014458_p58 hypothetical protein phrog_2870 unknown function unknown function 1 40958 41278
YP_003856944.1 NC_014458_p65 NrdH phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 43657 43899
YP_003856914.1 NC_014458_p35 hypothetical protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 29710 30141
YP_003856900.1 NC_014458_p21 hypothetical protein phrog_106 minor tail protein tail 1 15985 17121
YP_003856901.1 NC_014458_p22 minor tail subunit phrog_110 minor tail protein tail 1 17122 18888