| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_014461 |
Definition |
Mycobacterium virus Bron, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bronvirus. |
DB of origin |
REFSEQ |
Length |
73453 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
123 |
%GC |
58.83 |
Number of singletons |
2 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_003857234.1 | NC_014461_p103 | hypothetical protein | phrog_940 | nuclease | DNA, RNA and nucleotide metabolism | 1 | 61831 | 62541 |
| YP_003857239.1 | NC_014461_p108 | hypothetical protein | phrog_4776 | unknown function | unknown function | -1 | 63800 | 64537 |
| YP_003857152.1 | NC_014461_p21 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 21711 | 22886 |
| YP_003857184.1 | NC_014461_p53 | hypothetical protein | phrog_850 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 38743 | 40161 |
| YP_003857169.1 | NC_014461_p38 | hypothetical protein | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 32552 | 32968 |
| YP_003857135.1 | NC_014461_p4 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1059 | 2636 |
| YP_003857210.1 | NC_014461_p79 | hypothetical protein | phrog_1941 | unknown function | unknown function | 1 | 51879 | 52121 |
| YP_003857143.1 | NC_014461_p12 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 8474 | 8962 |
| YP_003857157.1 | NC_014461_p26 | LysB | phrog_102 | endolysin | lysis | 1 | 25573 | 26604 |
| YP_003857205.1 | NC_014461_p74 | Pnk | phrog_505 | polynucleotide kinase | other | 1 | 49752 | 50672 |
| YP_003857155.1 | NC_014461_p24 | hypothetical protein | phrog_3856 | minor tail protein | tail | 1 | 23457 | 24395 |
| YP_003857192.1 | NC_014461_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43383 | 43508 |
| YP_003857217.1 | NC_014461_p86 | hypothetical protein | phrog_17990 | unknown function | unknown function | 1 | 55381 | 55869 |
| YP_003857188.1 | NC_014461_p57 | hypothetical protein | phrog_18302 | unknown function | unknown function | 1 | 41131 | 41313 |
| YP_003857226.1 | NC_014461_p95 | hypothetical protein | phrog_6821 | unknown function | unknown function | 1 | 58853 | 59062 |
| YP_003857218.1 | NC_014461_p87 | hypothetical protein | phrog_7890 | unknown function | unknown function | 1 | 55870 | 55977 |
| YP_003857246.1 | NC_014461_p115 | hypothetical protein | phrog_6004 | unknown function | unknown function | -1 | 66818 | 67081 |
| YP_003857136.1 | NC_014461_p5 | portal | phrog_104 | portal protein | head and packaging | 1 | 2626 | 4299 |
| YP_003857222.1 | NC_014461_p91 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 57114 | 57353 |
| YP_003857242.1 | NC_014461_p111 | hypothetical protein | phrog_1909 | unknown function | unknown function | -1 | 65020 | 65862 |
| YP_003857167.1 | NC_014461_p36 | tyrosine integrase | phrog_1 | integrase | integration and excision | 1 | 30311 | 31618 |
| YP_003857181.1 | NC_014461_p50 | hypothetical protein | phrog_4870 | unknown function | unknown function | 1 | 37922 | 38338 |
| YP_003857138.1 | NC_014461_p7 | scaffold | phrog_3760 | head scaffolding protein | head and packaging | 1 | 5403 | 6041 |
| YP_003857171.1 | NC_014461_p40 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 33354 | 33563 |
| YP_003857248.1 | NC_014461_p117 | hypothetical protein | phrog_6176 | unknown function | unknown function | 1 | 67391 | 67849 |
| YP_003857228.1 | NC_014461_p97 | hypothetical protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 59723 | 60145 |
| YP_003857179.1 | NC_014461_p48 | hypothetical protein | phrog_7316 | unknown function | unknown function | 1 | 36672 | 36857 |
| YP_003857252.1 | NC_014461_p121 | hypothetical protein | phrog_7225 | unknown function | unknown function | -1 | 71773 | 71994 |
| YP_003857227.1 | NC_014461_p96 | endo VII | phrog_2633 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 59191 | 59751 |
| YP_003857215.1 | NC_014461_p84 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 53694 | 54107 |
| YP_003857176.1 | NC_014461_p45 | hypothetical protein | phrog_5916 | unknown function | unknown function | 1 | 34950 | 35315 |
| YP_003857165.1 | NC_014461_p34 | hypothetical protein | phrog_12168 | unknown function | unknown function | -1 | 29515 | 29763 |
| YP_003857208.1 | NC_014461_p77 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 51321 | 51551 |
| YP_003857148.1 | NC_014461_p17 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 15873 | 16772 |
| YP_003857206.1 | NC_014461_p75 | hypothetical protein | phrog_6064 | unknown function | unknown function | 1 | 50672 | 50884 |
| YP_003857144.1 | NC_014461_p13 | major tail protein | phrog_476 | major tail protein | tail | 1 | 8990 | 9892 |
| YP_003857233.1 | NC_014461_p102 | hypothetical protein | phrog_10290 | unknown function | unknown function | 1 | 61042 | 61206 |
| YP_003857221.1 | NC_014461_p90 | HNH | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 56599 | 57009 |
| YP_003857134.1 | NC_014461_p3 | hypothetical protein | phrog_6976 | unknown function | unknown function | 1 | 862 | 1053 |
| YP_003857231.1 | NC_014461_p100 | hypothetical protein | phrog_6800 | unknown function | unknown function | 1 | 60601 | 60783 |
| YP_003857158.1 | NC_014461_p27 | hypothetical protein | phrog_5963 | holin | lysis | 1 | 26605 | 27048 |
| YP_003857238.1 | NC_014461_p107 | hypothetical protein | phrog_2869 | unknown function | unknown function | -1 | 63625 | 63798 |
| YP_003857245.1 | NC_014461_p114 | hypothetical protein | phrog_7390 | unknown function | unknown function | -1 | 66539 | 66724 |
| YP_003857156.1 | NC_014461_p25 | LysA | phrog_700 | endolysin | lysis | 1 | 24401 | 25573 |
| YP_003857141.1 | NC_014461_p10 | hypothetical protein | phrog_5309 | head-tail adaptor | connector | 1 | 7711 | 8034 |
| YP_003857200.1 | NC_014461_p69 | hypothetical protein | phrog_31285 | unknown function | unknown function | 1 | 46850 | 46963 |
| YP_003857187.1 | NC_014461_p56 | hypothetical protein | phrog_5858 | unknown function | unknown function | 1 | 40953 | 41138 |
| YP_003857251.1 | NC_014461_p120 | hypothetical protein | phrog_24745 | unknown function | unknown function | 1 | 71209 | 71367 |
| YP_003857163.1 | NC_014461_p32 | NrdC | phrog_388 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | -1 | 28257 | 29003 |
| YP_003857199.1 | NC_014461_p68 | hypothetical protein | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 46573 | 46797 |
| YP_003857216.1 | NC_014461_p85 | RNA ligase | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 54107 | 55384 |
| YP_003857197.1 | NC_014461_p66 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 44626 | 45303 |
| YP_003857159.1 | NC_014461_p28 | hypothetical protein | phrog_5807 | unknown function | unknown function | 1 | 27048 | 27302 |
| YP_003857212.1 | NC_014461_p81 | single-stranded DNA binding major tail | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 52762 | 53145 |
| YP_003857174.1 | NC_014461_p43 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 34037 | 34453 |
| YP_003857207.1 | NC_014461_p76 | hypothetical protein | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 50885 | 51298 |
| YP_003857183.1 | NC_014461_p52 | hypothetical protein | phrog_1673 | unknown function | unknown function | 1 | 38500 | 38733 |
| YP_003857229.1 | NC_014461_p98 | original GeneMark call @bp 60145 | phrog_3699 | unknown function | unknown function | 1 | 60145 | 60369 |
| YP_003857175.1 | NC_014461_p44 | hypothetical protein | phrog_21835 | unknown function | unknown function | 1 | 34741 | 34878 |
| YP_003857149.1 | NC_014461_p18 | minor tail subunit | phrog_110 | minor tail protein | tail | 1 | 16772 | 18541 |
| YP_003857178.1 | NC_014461_p47 | hypothetical protein | phrog_6017 | unknown function | unknown function | 1 | 36395 | 36712 |
| YP_003857173.1 | NC_014461_p42 | hypothetical protein | phrog_8707 | unknown function | unknown function | 1 | 33930 | 34040 |
| YP_003857189.1 | NC_014461_p58 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 41365 | 42297 |
| YP_003857232.1 | NC_014461_p101 | hypothetical protein | phrog_17151 | unknown function | unknown function | 1 | 60783 | 60872 |
| YP_003857240.1 | NC_014461_p109 | hypothetical protein | phrog_20355 | unknown function | unknown function | -1 | 64554 | 64763 |
| YP_003857196.1 | NC_014461_p65 | hypothetical protein | phrog_14515 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44439 | 44690 |
| YP_003857224.1 | NC_014461_p93 | DnaQ | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 57709 | 58488 |
| YP_003857225.1 | NC_014461_p94 | hypothetical protein | phrog_6910 | unknown function | unknown function | 1 | 58485 | 58856 |
| YP_003857237.1 | NC_014461_p106 | hypothetical protein | phrog_7382 | unknown function | unknown function | -1 | 63317 | 63613 |
| YP_003857213.1 | NC_014461_p82 | hypothetical protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 53237 | 53431 |
| YP_003857185.1 | NC_014461_p54 | hypothetical protein | phrog_5872 | unknown function | unknown function | 1 | 40521 | 40793 |
| YP_003857160.1 | NC_014461_p29 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 27306 | 27725 |
| YP_003857172.1 | NC_014461_p41 | hypothetical protein | phrog_762 | unknown function | unknown function | 1 | 33560 | 33955 |
| YP_003857244.1 | NC_014461_p113 | hypothetical protein | phrog_6224 | unknown function | unknown function | -1 | 66340 | 66549 |
| YP_003857220.1 | NC_014461_p89 | hypothetical protein | phrog_1969 | unknown function | unknown function | 1 | 56209 | 56562 |
| YP_003857236.1 | NC_014461_p105 | hypothetical protein | phrog_17448 | unknown function | unknown function | -1 | 62916 | 63212 |
| YP_003857140.1 | NC_014461_p9 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 7274 | 7714 |
| YP_003857154.1 | NC_014461_p23 | hypothetical protein | phrog_17217 | unknown function | unknown function | 1 | 23291 | 23464 |
| YP_003857142.1 | NC_014461_p11 | hypothetical protein | phrog_5775 | head-tail connector protein | connector | 1 | 8034 | 8465 |
| YP_003857150.1 | NC_014461_p19 | hypothetical protein | phrog_4413 | minor tail protein | tail | 1 | 18576 | 19022 |
| YP_003857161.1 | NC_014461_p30 | NrdH | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 27716 | 27985 |
| YP_003857243.1 | NC_014461_p112 | original GeneMark call @bp 66313 | phrog_3777 | unknown function | unknown function | -1 | 65933 | 66313 |
| YP_003857203.1 | NC_014461_p72 | nicotinamide phosphoribosyl-transferase | phrog_448 | nicotinamide phosphoribosyl transferase | other | 1 | 47932 | 49407 |
| YP_003857214.1 | NC_014461_p83 | hypothetical protein | phrog_17756 | unknown function | unknown function | 1 | 53428 | 53676 |
| YP_003857219.1 | NC_014461_p88 | hypothetical protein | phrog_2218 | unknown function | unknown function | 1 | 55974 | 56222 |
| YP_003857162.1 | NC_014461_p31 | hypothetical protein | phrog_10321 | unknown function | unknown function | -1 | 28054 | 28260 |
| YP_003857247.1 | NC_014461_p116 | hypothetical protein | phrog_6968 | unknown function | unknown function | -1 | 67121 | 67330 |
| YP_003857194.1 | NC_014461_p63 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 43727 | 44095 |
| YP_003857168.1 | NC_014461_p37 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 31619 | 32401 |
| YP_003857191.1 | NC_014461_p60 | hypothetical protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 42622 | 43383 |
| YP_003857190.1 | NC_014461_p59 | hypothetical protein | phrog_1123 | unknown function | unknown function | 1 | 42278 | 42625 |
| YP_003857182.1 | NC_014461_p51 | hypothetical protein | phrog_22974 | unknown function | unknown function | 1 | 38400 | 38513 |
| YP_003857209.1 | NC_014461_p78 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 51554 | 51889 |
| YP_003857139.1 | NC_014461_p8 | hypothetical protein | phrog_283 | major head protein | head and packaging | 1 | 6085 | 7236 |
| YP_003857166.1 | NC_014461_p35 | hypothetical protein | phrog_26605 | unknown function | unknown function | -1 | 29870 | 30139 |
| YP_003857133.1 | NC_014461_p2 | hypothetical protein | phrog_1496 | terminase small subunit | head and packaging | 1 | 475 | 849 |
| YP_003857195.1 | NC_014461_p64 | hypothetical protein | phrog_8425 | unknown function | unknown function | 1 | 44089 | 44325 |
| YP_003857170.1 | NC_014461_p39 | hypothetical protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 33034 | 33357 |
| YP_003857145.1 | NC_014461_p14 | tail assembly chaperone | phrog_2624 | tail assembly chaperone | tail | 1 | 9981 | 10807 |
| YP_003857193.1 | NC_014461_p62 | hypothetical protein | phrog_5917 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 43521 | 43712 |
| YP_003857201.1 | NC_014461_p70 | hypothetical protein | phrog_6206 | unknown function | unknown function | 1 | 46957 | 47100 |
| YP_003857153.1 | NC_014461_p22 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 22935 | 23282 |
| YP_003857177.1 | NC_014461_p46 | hypothetical protein | phrog_1649 | metallo-phosphoesterase | other | 1 | 35317 | 36405 |
| YP_003857230.1 | NC_014461_p99 | original GeneMark call @bp 60362 | phrog_6027 | unknown function | unknown function | 1 | 60362 | 60481 |
| YP_003857235.1 | NC_014461_p104 | hypothetical protein | phrog_6170 | unknown function | unknown function | 1 | 62576 | 62872 |
| YP_003857186.1 | NC_014461_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40863 | 40952 |
| YP_003857223.1 | NC_014461_p92 | hypothetical protein | phrog_4472 | nucleotide kinase | other | 1 | 57350 | 57712 |
| YP_003857254.1 | NC_014461_p123 | hypothetical protein | phrog_21310 | unknown function | unknown function | -1 | 73042 | 73248 |
| YP_003857137.1 | NC_014461_p6 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 4321 | 5376 |
| YP_003857180.1 | NC_014461_p49 | hypothetical protein | phrog_200 | lipoprotein | other | 1 | 36926 | 37822 |
| YP_003857241.1 | NC_014461_p110 | hypothetical protein | phrog_6230 | unknown function | unknown function | -1 | 64763 | 64990 |
| YP_003857250.1 | NC_014461_p119 | AAA ATPase | phrog_249 | porphyrin biosynthesis | moron, auxiliary metabolic gene and host takeover | -1 | 69919 | 71163 |
| YP_003857249.1 | NC_014461_p118 | hypothetical protein | phrog_1909 | unknown function | unknown function | -1 | 68824 | 69696 |
| YP_003857147.1 | NC_014461_p16 | tape measure | phrog_3547 | tail length tape measure protein | tail | 1 | 10837 | 15801 |
| YP_003857132.1 | NC_014461_p1 | hypothetical protein | phrog_7082 | unknown function | unknown function | 1 | 83 | 466 |
| YP_003857198.1 | NC_014461_p67 | DnaC | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 45300 | 46565 |
| YP_003857253.1 | NC_014461_p122 | hypothetical protein | phrog_7398 | unknown function | unknown function | -1 | 72096 | 72608 |
| YP_003857164.1 | NC_014461_p33 | Lsr2 | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 29094 | 29522 |
| YP_003857146.1 | NC_014461_p15 | tail assembly chaperone | phrog_4464 | tail assembly chaperone | tail | 1 | 9981 | 10283 |
| YP_003857204.1 | NC_014461_p73 | hypothetical protein | phrog_16637 | unknown function | unknown function | 1 | 49507 | 49755 |
| YP_003857151.1 | NC_014461_p20 | hypothetical protein | phrog_346 | minor tail protein | tail | 1 | 19023 | 21704 |
| YP_003857202.1 | NC_014461_p71 | phosphoribosyl pyrophosphatase | phrog_619 | ribose-phosphate pyrophosphokinase | other | 1 | 47085 | 47942 |
| YP_003857211.1 | NC_014461_p80 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 52203 | 52769 |