| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_014901 |
Definition |
Mycobacterium phage Wee, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus. |
DB of origin |
REFSEQ |
Length |
59230 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
108 |
%GC |
61.78 |
Number of singletons |
2 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_004123921.1 | NC_014901_p99 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 54695 | 54862 |
| YP_004123871.1 | NC_014901_p49 | hypothetical protein | phrog_6267 | transcriptional repressor | transcription regulation | 1 | 35708 | 36055 |
| YP_004123889.1 | NC_014901_p67 | hypothetical protein | phrog_2632 | unknown function | unknown function | 1 | 42798 | 43040 |
| YP_004123848.1 | NC_014901_p26 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25822 | 26013 |
| YP_004123867.1 | NC_014901_p45 | hypothetical protein | phrog_20124 | unknown function | unknown function | -1 | 32767 | 32907 |
| YP_004123911.1 | NC_014901_p89 | MpmE1 | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 51559 | 51930 |
| YP_004123849.1 | NC_014901_p27 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 26086 | 26448 |
| YP_004123874.1 | NC_014901_p52 | hypothetical protein | phrog_1840 | excisionase | integration and excision | 1 | 37416 | 37700 |
| YP_004123888.1 | NC_014901_p66 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 42571 | 42801 |
| YP_004123828.1 | NC_014901_p6 | capsid | phrog_267 | major head protein | head and packaging | 1 | 5062 | 5883 |
| YP_004123914.1 | NC_014901_p92 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 52421 | 52684 |
| YP_004123834.1 | NC_014901_p12 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8576 | 9512 |
| YP_004123903.1 | NC_014901_p81 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 49394 | 49657 |
| YP_004123886.1 | NC_014901_p64 | hypothetical protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 42051 | 42416 |
| YP_004123899.1 | NC_014901_p77 | hypothetical protein | phrog_5921 | unknown function | unknown function | 1 | 46495 | 46647 |
| YP_004123900.1 | NC_014901_p78 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 46738 | 48411 |
| YP_004123877.1 | NC_014901_p55 | hypothetical protein | phrog_780 | unknown function | unknown function | 1 | 38414 | 38641 |
| YP_004123919.1 | NC_014901_p97 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 53738 | 54364 |
| YP_004123896.1 | NC_014901_p74 | hypothetical protein | phrog_3821 | unknown function | unknown function | 1 | 45423 | 45773 |
| YP_004123857.1 | NC_014901_p35 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 29832 | 30092 |
| YP_004123926.1 | NC_014901_p104 | glycosyl transferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 55891 | 57327 |
| YP_004123831.1 | NC_014901_p9 | hypothetical protein | phrog_1929 | head-tail connector protein | connector | 1 | 6781 | 7110 |
| YP_004123883.1 | NC_014901_p61 | WhiB | singleton | unknown function | unknown function | 1 | 41064 | 41294 |
| YP_004123844.1 | NC_014901_p22 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 23572 | 23913 |
| YP_004123833.1 | NC_014901_p11 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 7631 | 8440 |
| YP_004123901.1 | NC_014901_p79 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 48408 | 48542 |
| YP_004123904.1 | NC_014901_p82 | hypothetical protein | phrog_7196 | unknown function | unknown function | 1 | 49654 | 49845 |
| YP_004123892.1 | NC_014901_p70 | hypothetical protein | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44097 | 44459 |
| YP_004123868.1 | NC_014901_p46 | Y-integrase | phrog_1 | integrase | integration and excision | 1 | 33180 | 34283 |
| YP_004123832.1 | NC_014901_p10 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 7097 | 7504 |
| YP_004123842.1 | NC_014901_p20 | hypothetical protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 20505 | 22391 |
| YP_004123876.1 | NC_014901_p54 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 38226 | 38417 |
| YP_004123829.1 | NC_014901_p7 | hypothetical protein | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 5883 | 6449 |
| YP_004123913.1 | NC_014901_p91 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 52087 | 52371 |
| YP_004123895.1 | NC_014901_p73 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 45275 | 45430 |
| YP_004123908.1 | NC_014901_p86 | hypothetical protein | phrog_5429 | DNA repair protein | DNA, RNA and nucleotide metabolism | 1 | 50517 | 51026 |
| YP_004123852.1 | NC_014901_p30 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 26800 | 27072 |
| YP_004123873.1 | NC_014901_p51 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 37115 | 37330 |
| YP_004123869.1 | NC_014901_p47 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 34345 | 34800 |
| YP_004123920.1 | NC_014901_p98 | MerR | phrog_2474 | MerR-like transcriptional regulator | transcription regulation | 1 | 54474 | 54698 |
| YP_004123837.1 | NC_014901_p15 | tape measure protein | phrog_1942 | tail length tape measure protein | tail | 1 | 10070 | 13600 |
| YP_004123894.1 | NC_014901_p72 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 45127 | 45297 |
| YP_004123860.1 | NC_014901_p38 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 31201 | 31293 |
| YP_004123855.1 | NC_014901_p33 | hypothetical protein | phrog_443 | holin | lysis | 1 | 29231 | 29464 |
| YP_004123906.1 | NC_014901_p84 | hypothetical protein | phrog_1573 | DNA methyltransferase | other | 1 | 50033 | 50410 |
| YP_004123915.1 | NC_014901_p93 | hypothetical protein | phrog_6540 | unknown function | unknown function | 1 | 52681 | 52977 |
| YP_004123923.1 | NC_014901_p101 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 55069 | 55482 |
| YP_004123838.1 | NC_014901_p16 | hypothetical protein | phrog_106 | minor tail protein | tail | 1 | 13601 | 15310 |
| YP_004123878.1 | NC_014901_p56 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 38638 | 39354 |
| YP_004123917.1 | NC_014901_p95 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 53153 | 53290 |
| YP_004123835.1 | NC_014901_p13 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8576 | 9127 |
| YP_004123862.1 | NC_014901_p40 | hypothetical protein | phrog_5323 | unknown function | unknown function | -1 | 31715 | 31924 |
| YP_004123843.1 | NC_014901_p21 | hypothetical protein | phrog_2106 | minor tail protein | tail | 1 | 22388 | 23554 |
| YP_004123846.1 | NC_014901_p24 | hypothetical protein | phrog_2012 | minor tail protein | tail | 1 | 24203 | 24841 |
| YP_004123882.1 | NC_014901_p60 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 40789 | 41067 |
| YP_004123916.1 | NC_014901_p94 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 52974 | 53153 |
| YP_004123902.1 | NC_014901_p80 | hypothetical protein | phrog_2447 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 48546 | 49397 |
| YP_004123893.1 | NC_014901_p71 | hypothetical protein | phrog_2233 | unknown function | unknown function | 1 | 44456 | 45130 |
| YP_004123861.1 | NC_014901_p39 | hypothetical protein | phrog_7977 | unknown function | unknown function | -1 | 31461 | 31718 |
| YP_004123825.1 | NC_014901_p3 | portal | phrog_104 | portal protein | head and packaging | 1 | 2255 | 3625 |
| YP_004123922.1 | NC_014901_p100 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 54875 | 55072 |
| YP_004123927.1 | NC_014901_p105 | Ser/Thr kinase | phrog_3297 | kinase | other | 1 | 57330 | 57806 |
| YP_004123854.1 | NC_014901_p32 | LysB | phrog_102 | endolysin | lysis | 1 | 28223 | 29221 |
| YP_004123891.1 | NC_014901_p69 | hypothetical protein | phrog_17733 | unknown function | unknown function | 1 | 43915 | 44100 |
| YP_004123850.1 | NC_014901_p28 | hypothetical protein | phrog_932 | unknown function | unknown function | 1 | 26455 | 26601 |
| YP_004123826.1 | NC_014901_p4 | protease | phrog_1522 | head maturation protease | head and packaging | 1 | 3612 | 4367 |
| YP_004123853.1 | NC_014901_p31 | LysA | phrog_700 | endolysin | lysis | 1 | 27069 | 28223 |
| YP_004123866.1 | NC_014901_p44 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 32510 | 32704 |
| YP_004123840.1 | NC_014901_p18 | tail protein | phrog_732 | minor tail protein | tail | 1 | 17126 | 17974 |
| YP_004123928.1 | NC_014901_p106 | glycosyl transferase | singleton | unknown function | unknown function | 1 | 57803 | 57934 |
| YP_004123865.1 | NC_014901_p43 | hypothetical protein | phrog_8497 | unknown function | unknown function | -1 | 32287 | 32454 |
| YP_004123929.1 | NC_014901_p107 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 57931 | 58143 |
| YP_004123858.1 | NC_014901_p36 | DnaQ | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 30079 | 30900 |
| YP_004123856.1 | NC_014901_p34 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 29461 | 29835 |
| YP_004123880.1 | NC_014901_p58 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 40173 | 40454 |
| YP_004123930.1 | NC_014901_p108 | glycosyl transferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 58140 | 58763 |
| YP_004123918.1 | NC_014901_p96 | hypothetical protein | phrog_7643 | unknown function | unknown function | 1 | 53287 | 53625 |
| YP_004123884.1 | NC_014901_p62 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 41291 | 41776 |
| YP_004123885.1 | NC_014901_p63 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 41773 | 42054 |
| YP_004123879.1 | NC_014901_p57 | hypothetical protein | phrog_3416 | unknown function | unknown function | 1 | 39390 | 40094 |
| YP_004123863.1 | NC_014901_p41 | hypothetical protein | phrog_2864 | unknown function | unknown function | -1 | 31921 | 32088 |
| YP_004123905.1 | NC_014901_p83 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 49842 | 50036 |
| YP_004123823.1 | NC_014901_p1 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 109 | 564 |
| YP_004123910.1 | NC_014901_p88 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 51300 | 51425 |
| YP_004123912.1 | NC_014901_p90 | hypothetical protein | phrog_7842 | unknown function | unknown function | 1 | 51917 | 52090 |
| YP_004123824.1 | NC_014901_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 587 | 2224 |
| YP_004123830.1 | NC_014901_p8 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 6446 | 6778 |
| YP_004123872.1 | NC_014901_p50 | anti-repressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 36114 | 37118 |
| YP_004123836.1 | NC_014901_p14 | Hnh | phrog_3593 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 9531 | 10070 |
| YP_004123841.1 | NC_014901_p19 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 17971 | 20508 |
| YP_004123924.1 | NC_014901_p102 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 55479 | 55721 |
| YP_004123851.1 | NC_014901_p29 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 26598 | 26765 |
| YP_004123925.1 | NC_014901_p103 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 55714 | 55875 |
| YP_004123845.1 | NC_014901_p23 | hypothetical protein | phrog_2005 | minor tail protein | tail | 1 | 23936 | 24190 |
| YP_004123847.1 | NC_014901_p25 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 24838 | 25818 |
| YP_004123890.1 | NC_014901_p68 | AAA ATPase | phrog_1366 | unknown function | unknown function | 1 | 43037 | 43918 |
| YP_004123870.1 | NC_014901_p48 | hypothetical protein | phrog_3949 | transcriptional repressor | transcription regulation | -1 | 35063 | 35596 |
| YP_004123859.1 | NC_014901_p37 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 30918 | 31208 |
| YP_004123881.1 | NC_014901_p59 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 40451 | 40798 |
| YP_004123907.1 | NC_014901_p85 | hypothetical protein | phrog_30256 | unknown function | unknown function | 1 | 50410 | 50520 |
| YP_004123827.1 | NC_014901_p5 | scaffold | phrog_2592 | head scaffolding protein | head and packaging | 1 | 4393 | 5043 |
| YP_004123909.1 | NC_014901_p87 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 51023 | 51307 |
| YP_004123887.1 | NC_014901_p65 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 42416 | 42571 |
| YP_004123898.1 | NC_014901_p76 | hypothetical protein | phrog_7170 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 46095 | 46502 |
| YP_004123897.1 | NC_014901_p75 | hypothetical protein | phrog_2060 | DNA methyltransferase | other | 1 | 45832 | 46098 |
| YP_004123839.1 | NC_014901_p17 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 15380 | 17089 |
| YP_004123864.1 | NC_014901_p42 | hypothetical protein | phrog_20138 | unknown function | unknown function | -1 | 32088 | 32258 |
| YP_004123875.1 | NC_014901_p53 | hypothetical protein | phrog_2021 | unknown function | unknown function | 1 | 37717 | 38229 |