Genomic map of Vibrio phage ICP2 (NC_015158)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_015158
Definition
Vibrio phage ICP2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
DB of origin
REFSEQ
Length
49675
Host Name
Vibrio cholerae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
72
%GC
42.67
Number of singletons
5
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_004251226.1 NC_015158_p55 hypothetical protein phrog_19119 unknown function unknown function 1 43651 43893
YP_004251217.1 NC_015158_p46 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 37097 37912
YP_004251178.1 NC_015158_p7 hypothetical protein phrog_8168 unknown function unknown function -1 7678 8124
YP_004251176.1 NC_015158_p5 hypothetical protein phrog_17082 unknown function unknown function -1 1422 3404
YP_004251189.1 NC_015158_p18 hypothetical protein phrog_8956 unknown function unknown function -1 16744 16983
YP_004251180.1 NC_015158_p9 hypothetical protein phrog_8094 tail appendage tail -1 8575 10779
YP_004251206.1 NC_015158_p35 hypothetical protein phrog_16974 unknown function unknown function 1 30490 30987
YP_004251227.1 NC_015158_p56 hypothetical protein phrog_18273 unknown function unknown function 1 43896 44114
YP_004251212.1 NC_015158_p41 cobalamin biosynthesis protein CobT phrog_17276 aerobic cobaltochelatase CobT subunit moron, auxiliary metabolic gene and host takeover 1 33357 35099
YP_004251228.1 NC_015158_p57 hypothetical protein phrog_16403 unknown function unknown function 1 44104 44544
YP_004251191.1 NC_015158_p20 hypothetical protein phrog_38 terminase large subunit head and packaging -1 18739 20265
YP_004251242.1 NC_015158_p71 hypothetical protein phrog_21384 unknown function unknown function 1 49083 49394
YP_004251207.1 NC_015158_p36 hypothetical protein phrog_1965 unknown function unknown function 1 31055 31648
YP_004251220.1 NC_015158_p49 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 38852 40111
YP_004251214.1 NC_015158_p43 hypothetical protein phrog_17083 unknown function unknown function 1 36240 36542
YP_004251229.1 NC_015158_p58 hypothetical protein phrog_16403 unknown function unknown function 1 44278 44544
YP_004251235.1 NC_015158_p64 hypothetical protein phrog_19822 unknown function unknown function 1 46837 47079
YP_004251238.1 NC_015158_p67 hypothetical protein phrog_20277 unknown function unknown function 1 48007 48219
YP_004251213.1 NC_015158_p42 cobalamin biosynthesis protein CobS phrog_249 porphyrin biosynthesis moron, auxiliary metabolic gene and host takeover 1 35115 36230
YP_004251185.1 NC_015158_p14 hypothetical protein phrog_17462 unknown function unknown function -1 12658 14286
YP_004251223.1 NC_015158_p52 hypothetical protein singleton unknown function unknown function 1 42689 42790
YP_004251200.1 NC_015158_p29 hypothetical protein phrog_14633 unknown function unknown function 1 28792 29022
YP_004251218.1 NC_015158_p47 hypothetical protein phrog_18510 unknown function unknown function 1 37903 38436
YP_004251202.1 NC_015158_p31 hypothetical protein phrog_18025 unknown function unknown function 1 29360 29611
YP_004251243.1 NC_015158_p72 hypothetical protein phrog_19358 unknown function unknown function 1 49442 49639
YP_004251190.1 NC_015158_p19 hypothetical protein phrog_332 head-tail adaptor connector -1 16994 18739
YP_004251209.1 NC_015158_p38 hypothetical protein phrog_17022 unknown function unknown function 1 32020 32805
YP_004251197.1 NC_015158_p26 hypothetical protein phrog_15513 unknown function unknown function 1 27842 28084
YP_004251187.1 NC_015158_p16 hypothetical protein phrog_267 major head protein head and packaging -1 14950 15921
YP_004251175.1 NC_015158_p4 hypothetical protein phrog_21136 unknown function unknown function -1 1123 1419
YP_004251201.1 NC_015158_p30 hypothetical protein phrog_22803 unknown function unknown function 1 29099 29302
YP_004251216.1 NC_015158_p45 hypothetical protein phrog_19971 unknown function unknown function 1 36841 37131
YP_004251236.1 NC_015158_p65 hypothetical protein phrog_715 MazG-like pyrophosphatase other 1 47076 47414
YP_004251188.1 NC_015158_p17 hypothetical protein phrog_7931 unknown function unknown function -1 15941 16690
YP_004251237.1 NC_015158_p66 thymidine kinase phrog_592 thymidine kinase other 1 47414 48010
YP_004251222.1 NC_015158_p51 hypothetical protein phrog_2081 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41371 41820
YP_004251184.1 NC_015158_p13 hypothetical protein phrog_18064 unknown function unknown function -1 12052 12465
YP_004251232.1 NC_015158_p61 hypothetical protein phrog_25943 unknown function unknown function 1 45602 45733
YP_004251173.1 NC_015158_p2 hypothetical protein phrog_16830 unknown function unknown function -1 545 925
YP_004251221.1 NC_015158_p50 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 40112 42680
YP_004251179.1 NC_015158_p8 hypothetical protein phrog_1249 acetyltransferase other -1 8126 8578
YP_004251194.1 NC_015158_p23 hypothetical protein phrog_10745 unknown function unknown function -1 21102 22151
YP_004251240.1 NC_015158_p69 hypothetical protein singleton unknown function unknown function 1 48748 48825
YP_004251193.1 NC_015158_p22 hypothetical protein phrog_2432 unknown function unknown function -1 20814 21092
YP_004251205.1 NC_015158_p34 hypothetical protein phrog_18100 unknown function unknown function 1 30103 30435
YP_004251219.1 NC_015158_p48 hypothetical protein phrog_16700 unknown function unknown function 1 38439 38858
YP_004251239.1 NC_015158_p68 hypothetical protein singleton unknown function unknown function 1 48339 48527
YP_004251234.1 NC_015158_p63 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 46148 46837
YP_004251186.1 NC_015158_p15 hypothetical protein phrog_18422 unknown function unknown function -1 14371 14880
YP_004251215.1 NC_015158_p44 hypothetical protein phrog_16777 unknown function unknown function 1 36523 36786
YP_004251225.1 NC_015158_p54 hypothetical protein phrog_18140 unknown function unknown function 1 43099 43593
YP_004251182.1 NC_015158_p11 hypothetical protein phrog_7592 tail protein tail -1 10971 11765
YP_004251174.1 NC_015158_p3 hypothetical protein phrog_3899 unknown function unknown function -1 855 1154
YP_004251177.1 NC_015158_p6 hypothetical protein phrog_12003 internal virion protein head and packaging -1 3411 7661
YP_004251203.1 NC_015158_p32 hypothetical protein phrog_17158 unknown function unknown function 1 29630 29818
YP_004251241.1 NC_015158_p70 hypothetical protein phrog_11040 unknown function unknown function 1 48865 49083
YP_004251181.1 NC_015158_p10 hypothetical protein phrog_9082 unknown function unknown function -1 10760 10960
YP_004251192.1 NC_015158_p21 hypothetical protein phrog_8035 unknown function unknown function -1 20258 20761
YP_004251233.1 NC_015158_p62 endonuclease phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 45714 46151
YP_004251198.1 NC_015158_p27 hypothetical protein phrog_14737 unknown function unknown function 1 28102 28593
YP_004251211.1 NC_015158_p40 hypothetical protein singleton unknown function unknown function 1 33071 33355
YP_004251231.1 NC_015158_p60 hypothetical protein phrog_19549 unknown function unknown function 1 45367 45609
YP_004251230.1 NC_015158_p59 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 44546 45397
YP_004251208.1 NC_015158_p37 hypothetical protein phrog_17353 unknown function unknown function 1 31652 32020
YP_004251204.1 NC_015158_p33 hypothetical protein phrog_21997 unknown function unknown function 1 29888 30082
YP_004251199.1 NC_015158_p28 hypothetical protein phrog_21943 unknown function unknown function 1 28664 28795
YP_004251195.1 NC_015158_p24 phage tail fiber protein phrog_14064 tail fiber protein tail -1 22161 23780
YP_004251183.1 NC_015158_p12 hypothetical protein phrog_4590 unknown function unknown function -1 11765 12052
YP_004251224.1 NC_015158_p53 endonuclease phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism 1 42763 43053
YP_004251210.1 NC_015158_p39 hypothetical protein phrog_18043 unknown function unknown function 1 32878 33054
YP_004251196.1 NC_015158_p25 hypothetical protein phrog_17587 tail fiber protein tail -1 23791 26088
YP_004251172.1 NC_015158_p1 hypothetical protein singleton unknown function unknown function -1 129 446