Genomic map of Brochothrix phage NF5 (NC_015252)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_015252
Definition
Brochothrix phage NF5, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
36953
Host Name
Brochothrix thermosphacta
Host domain
Bacteria
Is prophage?
undef
Number of proteins
58
%GC
37.29
Number of singletons
11
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_004301308.1 NC_015252_p33 hypothetical protein phrog_29050 unknown function unknown function 1 25292 25483
YP_004301326.1 NC_015252_p51 hypothetical protein singleton unknown function unknown function 1 34110 34418
YP_004301318.1 NC_015252_p43 hypothetical protein phrog_1494 unknown function unknown function 1 31335 31550
YP_004301307.1 NC_015252_p32 hypothetical protein singleton unknown function unknown function 1 24987 25289
YP_004301276.1 NC_015252_p1 small terminase subunit phrog_51 terminase small subunit head and packaging 1 16 453
YP_004301310.1 NC_015252_p35 recN-like protein phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 25641 27623
YP_004301279.1 NC_015252_p4 head morphogenesis protein phrog_115 minor head protein head and packaging 1 3097 4119
YP_004301317.1 NC_015252_p42 hypothetical protein singleton unknown function unknown function 1 31145 31342
YP_004301289.1 NC_015252_p14 hypothetical protein phrog_441 tail assembly chaperone tail 1 8340 8618
YP_004301316.1 NC_015252_p41 hypothetical protein phrog_8315 unknown function unknown function 1 30963 31145
YP_004301293.1 NC_015252_p18 minor structural protein phrog_287 minor tail protein tail 1 14204 16084
YP_004301328.1 NC_015252_p53 hypothetical protein phrog_28057 unknown function unknown function 1 34629 34817
YP_004301309.1 NC_015252_p34 hypothetical protein singleton unknown function unknown function 1 25458 25625
YP_004301329.1 NC_015252_p54 transcription regulator phrog_248 transcriptional activator transcription regulation 1 34817 35308
YP_004301319.1 NC_015252_p44 hypothetical protein singleton unknown function unknown function 1 31547 31729
YP_004301324.1 NC_015252_p49 hypothetical protein phrog_33211 unknown function unknown function 1 33159 33401
YP_004301290.1 NC_015252_p15 tail tape measure protein phrog_58 tail length tape measure protein tail 1 8638 10662
YP_004301321.1 NC_015252_p46 single strand binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 32039 32527
YP_004301291.1 NC_015252_p16 hypothetical protein phrog_33 distal tail protein Dit tail 1 10674 11441
YP_004301330.1 NC_015252_p55 hypothetical protein singleton unknown function unknown function 1 35532 35663
YP_004301284.1 NC_015252_p9 hypothetical protein phrog_348 minor head protein head and packaging 1 6315 6632
YP_004301278.1 NC_015252_p3 portal protein phrog_64 portal protein head and packaging 1 1727 3097
YP_004301327.1 NC_015252_p52 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 34408 34596
YP_004301300.1 NC_015252_p25 hypothetical protein singleton unknown function unknown function 1 20081 20881
YP_004301282.1 NC_015252_p7 major head protein phrog_544 major head protein head and packaging 1 4888 5700
YP_004301301.1 NC_015252_p26 hypothetical protein singleton unknown function unknown function -1 20984 21142
YP_004301306.1 NC_015252_p31 hypothetical protein phrog_130 anti-repressor Ant transcription regulation 1 24212 24985
YP_004301315.1 NC_015252_p40 hypothetical protein phrog_28012 unknown function unknown function 1 30754 30963
YP_004301277.1 NC_015252_p2 large terminase subunit phrog_2 terminase large subunit head and packaging 1 446 1723
YP_004301285.1 NC_015252_p10 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 6625 6972
YP_004301331.1 NC_015252_p56 hypothetical protein singleton unknown function unknown function 1 35660 36400
YP_004301305.1 NC_015252_p30 transcription regulator phrog_3 transcriptional repressor transcription regulation 1 23937 24200
YP_004301314.1 NC_015252_p39 hypothetical protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 29956 30732
YP_004301325.1 NC_015252_p50 hypothetical protein phrog_398 unknown function unknown function 1 33370 34038
YP_004301303.1 NC_015252_p28 hypothetical protein singleton unknown function unknown function -1 22468 23073
YP_004301295.1 NC_015252_p20 hypothetical protein phrog_1766 tail fiber protein tail 1 18032 18487
YP_004301320.1 NC_015252_p45 hypothetical protein singleton unknown function unknown function 1 31730 32038
YP_004301280.1 NC_015252_p5 scaffolding protein phrog_2932 head scaffolding protein head and packaging 1 4203 4886
YP_004301312.1 NC_015252_p37 hypothetical protein phrog_392 metal-dependent hydrolase other 1 28519 29229
YP_004301294.1 NC_015252_p19 hypothetical protein phrog_257 minor tail protein tail 1 16099 18018
YP_004301322.1 NC_015252_p47 hypothetical protein phrog_33839 unknown function unknown function 1 32529 32735
YP_004301323.1 NC_015252_p48 resolvase-like protein phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 32745 33158
YP_004301299.1 NC_015252_p24 N-acetylmuramoyl-L-alanine amidase phrog_833 endolysin lysis 1 19255 20010
YP_004301281.1 NC_015252_p6 hypothetical protein phrog_544 major head protein head and packaging 1 4888 5966
YP_004301296.1 NC_015252_p21 hypothetical protein phrog_134 unknown function unknown function 1 18487 18648
YP_004301332.1 NC_015252_p57 hypothetical protein phrog_419 unknown function unknown function 1 36460 36771
YP_004301333.1 NC_015252_p58 hypothetical protein phrog_38295 unknown function unknown function 1 36773 36952
YP_004301297.1 NC_015252_p22 hypothetical protein phrog_1009 unknown function unknown function 1 18649 18981
YP_004301283.1 NC_015252_p8 hypothetical protein phrog_132 head-tail adaptor connector 1 5971 6318
YP_004301292.1 NC_015252_p17 hypothetical protein phrog_1067 minor head protein head and packaging 1 11438 14185
YP_004301288.1 NC_015252_p13 hypothetical protein phrog_183 tail chaperone protein tail 1 7930 8277
YP_004301302.1 NC_015252_p27 integrase phrog_1 integrase integration and excision -1 21237 22430
YP_004301287.1 NC_015252_p12 major tail protein phrog_238 major tail protein tail 1 7380 7889
YP_004301286.1 NC_015252_p11 hypothetical protein phrog_176 tail terminator connector 1 6978 7367
YP_004301304.1 NC_015252_p29 CI-like repressor phrog_4 transcriptional repressor transcription regulation -1 23098 23796
YP_004301313.1 NC_015252_p38 hypothetical protein phrog_1163 unknown function unknown function 1 29229 30029
YP_004301298.1 NC_015252_p23 hypothetical protein phrog_297 holin lysis 1 18978 19253
YP_004301311.1 NC_015252_p36 recT-like protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 27626 28516