Genomic map of Burkholderia phage KS5 (NC_015265)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_015265
Definition
Burkholderia phage KS5, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Kisquinquevirus; Burkholderia virus KS5.
DB of origin
REFSEQ
Length
37236
Host Name
Burkholderia cenocepacia
Host domain
Bacteria
Is prophage?
undef
Number of proteins
46
%GC
63.7
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_004306388.1 NC_015265_p22 Com translational regulator phrog_6417 translational regulator other -1 17720 17902
YP_004306379.1 NC_015265_p13 transposase phrog_3598 transposase integration and excision 1 9063 10055
YP_004306393.1 NC_015265_p27 baseplate assembly protein (W) phrog_43 baseplate wedge subunit tail -1 21999 22376
YP_004306375.1 NC_015265_p9 DNA binding protein phrog_20051 DNA binding protein DNA, RNA and nucleotide metabolism -1 6547 6825
YP_004306382.1 NC_015265_p16 tail tape measure protein (T) phrog_28 tail length tape measure protein tail -1 11949 14711
YP_004306374.1 NC_015265_p8 transcriptional activator (Ogr) phrog_603 transcriptional regulator transcription regulation -1 6289 6537
YP_004306409.1 NC_015265_p43 terminase ATPase subunit (P) phrog_2 terminase large subunit head and packaging 1 31855 33621
YP_004306368.1 NC_015265_p2 zinc finger CHC2-family protein phrog_5629 DNA primase DNA, RNA and nucleotide metabolism -1 2142 4937
YP_004306403.1 NC_015265_p37 tail protein (X) phrog_46 baseplate hub tail -1 28103 28315
YP_004306411.1 NC_015265_p45 reverse transcriptase phrog_2825 polymerase DNA, RNA and nucleotide metabolism -1 35144 36163
YP_004306383.1 NC_015265_p17 tail protein (E+E') phrog_103 tail protein tail -1 14708 15138
YP_004306381.1 NC_015265_p15 tail protein (U) phrog_76 tail protein tail -1 11507 11935
YP_004306387.1 NC_015265_p21 N-4/N-6 DNA methylase phrog_67 DNA methyltransferase other -1 16993 17742
YP_004306385.1 NC_015265_p19 tail tube protein (FII) phrog_55 head closure connector -1 15171 15680
YP_004306407.1 NC_015265_p41 capsid protein (N) phrog_70 major head protein head and packaging -1 29821 30846
YP_004306390.1 NC_015265_p24 tail fiber protein phrog_4849 tail protein tail -1 18937 20547
YP_004306410.1 NC_015265_p44 portal vertex protein (Q) phrog_68 portal protein head and packaging 1 33621 34673
YP_004306369.1 NC_015265_p3 hypothetical protein phrog_5898 unknown function unknown function -1 4940 5200
YP_004306386.1 NC_015265_p20 tail sheath protein (FI) phrog_23 tail sheath tail -1 15710 16882
YP_004306398.1 NC_015265_p32 Rz phrog_4952 signal peptide motif other -1 26125 26616
YP_004306394.1 NC_015265_p28 baseplate assembly protein (V) phrog_11 baseplate spike tail -1 22373 23005
YP_004306370.1 NC_015265_p4 hypothetical protein phrog_7408 unknown function unknown function -1 5197 5556
YP_004306399.1 NC_015265_p33 Rz1 phrog_31473 unknown function unknown function -1 26172 26366
YP_004306391.1 NC_015265_p25 baseplate assembly protein (I) phrog_48 tail protein tail -1 20550 21104
YP_004306384.1 NC_015265_p18 tail protein (E) phrog_103 tail protein tail -1 14827 15138
YP_004306397.1 NC_015265_p31 tail completion protein (R) phrog_65 tail terminator connector -1 25718 26128
YP_004306402.1 NC_015265_p36 antiholin phrog_198 holin lysis -1 27726 28100
YP_004306412.1 NC_015265_p46 transcriptional regulator phrog_8 transcriptional regulator transcription regulation -1 36120 36443
YP_004306372.1 NC_015265_p6 hypothetical protein phrog_6236 unknown function unknown function -1 5798 6001
YP_004306389.1 NC_015265_p23 tail fiber assembly protein phrog_105 tail fiber assembly tail -1 18049 18927
YP_004306371.1 NC_015265_p5 membrane protein phrog_7715 unknown function unknown function -1 5561 5755
YP_004306405.1 NC_015265_p39 capsid completion protein (L) phrog_71 head-tail adaptor Ad1 connector -1 28557 29033
YP_004306378.1 NC_015265_p12 membrane protein phrog_6521 membrane protein moron, auxiliary metabolic gene and host takeover 1 7660 8406
YP_004306376.1 NC_015265_p10 hypothetical protein phrog_3431 Arc-like repressor transcription regulation -1 6829 7065
YP_004306401.1 NC_015265_p35 holin phrog_217 holin lysis -1 27406 27726
YP_004306380.1 NC_015265_p14 tail protein (D) phrog_52 tail protein tail -1 10359 11510
YP_004306373.1 NC_015265_p7 hypothetical protein phrog_7831 unknown function unknown function -1 6005 6199
YP_004306404.1 NC_015265_p38 hypothetical protein phrog_6732 unknown function unknown function -1 28315 28557
YP_004306400.1 NC_015265_p34 endolysin phrog_1224 endolysin head and packaging -1 26613 27413
YP_004306392.1 NC_015265_p26 baseplate assembly protein (J) phrog_6 baseplate wedge subunit tail -1 21097 22002
YP_004306395.1 NC_015265_p29 exonuclease (Old) phrog_4747 unknown function unknown function -1 23206 25086
YP_004306408.1 NC_015265_p42 capsid scaffolding protein (O) phrog_73 head scaffolding protein head and packaging -1 30884 31705
YP_004306367.1 NC_015265_p1 integrase phrog_1 integrase integration and excision -1 108 815
YP_004306377.1 NC_015265_p11 repressor phrog_8 transcriptional regulator transcription regulation 1 7121 7603
YP_004306396.1 NC_015265_p30 tail completion protein (S) phrog_26 tail completion or Neck1 protein connector -1 25269 25718
YP_004306406.1 NC_015265_p40 terminase endonuclease subunit (M) phrog_74 terminase small subunit head and packaging -1 29138 29824