| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_015266 |
Definition |
Burkholderia phage KL3, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Tigrvirus; Burkholderia virus KL3. |
DB of origin |
REFSEQ |
Length |
40555 |
Host Name |
Burkholderia ambifaria |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
52 |
%GC |
63.22 |
Number of singletons |
1 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_004306448.1 | NC_015266_p36 | tail protein (X) | phrog_46 | baseplate hub | tail | -1 | 24934 | 25140 |
| YP_004306464.1 | NC_015266_p52 | transcriptional regulator | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 40202 | 40408 |
| YP_004306421.1 | NC_015266_p9 | transcriptional activator (Ogr) | phrog_603 | transcriptional regulator | transcription regulation | -1 | 6243 | 6491 |
| YP_004306414.1 | NC_015266_p2 | hypothetical protein | phrog_4764 | excisionase | integration and excision | -1 | 1150 | 1416 |
| YP_004306416.1 | NC_015266_p4 | hypothetical protein | phrog_5898 | unknown function | unknown function | -1 | 4894 | 5142 |
| YP_004306435.1 | NC_015266_p23 | tail fiber protein | phrog_4849 | tail protein | tail | -1 | 15969 | 18632 |
| YP_004306432.1 | NC_015266_p20 | tail tube protein (FII) | phrog_55 | head closure | connector | -1 | 13578 | 14087 |
| YP_004306458.1 | NC_015266_p46 | Vsr endonuclease | phrog_13076 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 34696 | 35142 |
| YP_004306446.1 | NC_015266_p34 | holin | phrog_217 | holin | lysis | -1 | 24300 | 24572 |
| YP_004306431.1 | NC_015266_p19 | tail protein (E) | phrog_103 | tail protein | tail | -1 | 13158 | 13508 |
| YP_004306424.1 | NC_015266_p12 | hypothetical protein | phrog_3431 | Arc-like repressor | transcription regulation | -1 | 6934 | 7143 |
| YP_004306423.1 | NC_015266_p11 | hypothetical protein | phrog_4113 | unknown function | unknown function | -1 | 6722 | 6919 |
| YP_004306433.1 | NC_015266_p21 | tail sheath protein (FI) | phrog_23 | tail sheath | tail | -1 | 14103 | 15275 |
| YP_004306456.1 | NC_015266_p44 | hypothetical protein | phrog_29172 | unknown function | unknown function | -1 | 31722 | 33290 |
| YP_004306452.1 | NC_015266_p40 | capsid scaffolding protein (O) | phrog_73 | head scaffolding protein | head and packaging | -1 | 27454 | 28266 |
| YP_004306451.1 | NC_015266_p39 | capsid protein (N) | phrog_70 | major head protein | head and packaging | -1 | 26405 | 27418 |
| YP_004306461.1 | NC_015266_p49 | hypothetical protein | phrog_6456 | unknown function | unknown function | -1 | 37728 | 38816 |
| YP_004306438.1 | NC_015266_p26 | baseplate assembly protein (W) | phrog_43 | baseplate wedge subunit | tail | -1 | 20084 | 20446 |
| YP_004306460.1 | NC_015266_p48 | hypothetical protein | phrog_6456 | unknown function | unknown function | -1 | 36570 | 37685 |
| YP_004306413.1 | NC_015266_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 122 | 1150 |
| YP_004306453.1 | NC_015266_p41 | terminase ATPase subunit (P) | phrog_2 | terminase large subunit | head and packaging | 1 | 28345 | 30180 |
| YP_004306422.1 | NC_015266_p10 | hypothetical protein | phrog_9850 | unknown function | unknown function | -1 | 6479 | 6682 |
| YP_004306430.1 | NC_015266_p18 | tail protein (E+E') | phrog_103 | tail protein | tail | -1 | 13036 | 13508 |
| YP_004306442.1 | NC_015266_p30 | tail completion protein (R) | phrog_65 | tail terminator | connector | -1 | 22527 | 22943 |
| YP_004306418.1 | NC_015266_p6 | membrane protein | phrog_7715 | unknown function | unknown function | -1 | 5506 | 5700 |
| YP_004306428.1 | NC_015266_p16 | tail protein (U) | phrog_76 | tail protein | tail | -1 | 9326 | 9784 |
| YP_004306463.1 | NC_015266_p51 | hypothetical protein | phrog_5348 | unknown function | unknown function | -1 | 39523 | 40032 |
| YP_004306429.1 | NC_015266_p17 | tail tape measure protein (T) | phrog_28 | tail length tape measure protein | tail | -1 | 9806 | 13033 |
| YP_004306436.1 | NC_015266_p24 | baseplate assembly protein (I) | phrog_48 | tail protein | tail | -1 | 18635 | 19189 |
| YP_004306455.1 | NC_015266_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31595 | 31732 |
| YP_004306462.1 | NC_015266_p50 | hypothetical protein | phrog_7616 | unknown function | unknown function | -1 | 38822 | 39526 |
| YP_004306443.1 | NC_015266_p31 | Rz1 (LysC) | phrog_952 | Rz-like spanin | lysis | -1 | 22936 | 23220 |
| YP_004306457.1 | NC_015266_p45 | EcoRII-C endonuclease | phrog_36646 | restriction endonuclease II | DNA, RNA and nucleotide metabolism | -1 | 33455 | 34699 |
| YP_004306439.1 | NC_015266_p27 | baseplate assembly protein (V) | phrog_11 | baseplate spike | tail | -1 | 20443 | 21138 |
| YP_004306449.1 | NC_015266_p37 | capsid completion protein (L) | phrog_71 | head-tail adaptor Ad1 | connector | -1 | 25140 | 25619 |
| YP_004306441.1 | NC_015266_p29 | tail completion protein (S) | phrog_26 | tail completion or Neck1 protein | connector | -1 | 22060 | 22527 |
| YP_004306434.1 | NC_015266_p22 | tail fiber assembly protein | phrog_105 | tail fiber assembly | tail | -1 | 15328 | 15951 |
| YP_004306426.1 | NC_015266_p14 | hypothetical protein | phrog_12492 | unknown function | unknown function | 1 | 7904 | 8179 |
| YP_004306447.1 | NC_015266_p35 | antiholin | phrog_198 | holin | lysis | -1 | 24574 | 24918 |
| YP_004306420.1 | NC_015266_p8 | hypothetical protein | phrog_7831 | unknown function | unknown function | -1 | 5943 | 6155 |
| YP_004306419.1 | NC_015266_p7 | hypothetical protein | phrog_6236 | unknown function | unknown function | -1 | 5744 | 5938 |
| YP_004306440.1 | NC_015266_p28 | N-4/N-6 DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 21304 | 22080 |
| YP_004306417.1 | NC_015266_p5 | hypothetical protein | phrog_7408 | unknown function | unknown function | -1 | 5139 | 5501 |
| YP_004306459.1 | NC_015266_p47 | EcoRII DNA cytosine methylase | phrog_116 | DNA methyltransferase | other | -1 | 35142 | 36410 |
| YP_004306425.1 | NC_015266_p13 | repressor | phrog_8 | transcriptional regulator | transcription regulation | 1 | 7193 | 7732 |
| YP_004306415.1 | NC_015266_p3 | zinc finger CHC2-family protein | phrog_5629 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 2096 | 4891 |
| YP_004306445.1 | NC_015266_p33 | endolysin | phrog_1224 | endolysin | head and packaging | -1 | 23494 | 24303 |
| YP_004306427.1 | NC_015266_p15 | tail protein (D) | phrog_52 | tail protein | tail | -1 | 8238 | 9329 |
| YP_004306454.1 | NC_015266_p42 | portal vertex protein (Q) | phrog_68 | portal protein | head and packaging | 1 | 30177 | 31226 |
| YP_004306450.1 | NC_015266_p38 | terminase endonuclease subunit (M) | phrog_74 | terminase small subunit | head and packaging | -1 | 25719 | 26408 |
| YP_004306444.1 | NC_015266_p32 | Rz (LysB) | phrog_89 | Rz-like spanin | lysis | -1 | 23057 | 23497 |
| YP_004306437.1 | NC_015266_p25 | baseplate assembly protein (J) | phrog_6 | baseplate wedge subunit | tail | -1 | 19182 | 20087 |