Genomic map of Burkholderia phage KL3 (NC_015266)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_015266
Definition
Burkholderia phage KL3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Tigrvirus; Burkholderia virus KL3.
DB of origin
REFSEQ
Length
40555
Host Name
Burkholderia ambifaria
Host domain
Bacteria
Is prophage?
undef
Number of proteins
52
%GC
63.22
Number of singletons
1
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_004306448.1 NC_015266_p36 tail protein (X) phrog_46 baseplate hub tail -1 24934 25140
YP_004306464.1 NC_015266_p52 transcriptional regulator phrog_66 excisionase and transcriptional regulator integration and excision 1 40202 40408
YP_004306421.1 NC_015266_p9 transcriptional activator (Ogr) phrog_603 transcriptional regulator transcription regulation -1 6243 6491
YP_004306414.1 NC_015266_p2 hypothetical protein phrog_4764 excisionase integration and excision -1 1150 1416
YP_004306416.1 NC_015266_p4 hypothetical protein phrog_5898 unknown function unknown function -1 4894 5142
YP_004306435.1 NC_015266_p23 tail fiber protein phrog_4849 tail protein tail -1 15969 18632
YP_004306432.1 NC_015266_p20 tail tube protein (FII) phrog_55 head closure connector -1 13578 14087
YP_004306458.1 NC_015266_p46 Vsr endonuclease phrog_13076 endonuclease DNA, RNA and nucleotide metabolism -1 34696 35142
YP_004306446.1 NC_015266_p34 holin phrog_217 holin lysis -1 24300 24572
YP_004306431.1 NC_015266_p19 tail protein (E) phrog_103 tail protein tail -1 13158 13508
YP_004306424.1 NC_015266_p12 hypothetical protein phrog_3431 Arc-like repressor transcription regulation -1 6934 7143
YP_004306423.1 NC_015266_p11 hypothetical protein phrog_4113 unknown function unknown function -1 6722 6919
YP_004306433.1 NC_015266_p21 tail sheath protein (FI) phrog_23 tail sheath tail -1 14103 15275
YP_004306456.1 NC_015266_p44 hypothetical protein phrog_29172 unknown function unknown function -1 31722 33290
YP_004306452.1 NC_015266_p40 capsid scaffolding protein (O) phrog_73 head scaffolding protein head and packaging -1 27454 28266
YP_004306451.1 NC_015266_p39 capsid protein (N) phrog_70 major head protein head and packaging -1 26405 27418
YP_004306461.1 NC_015266_p49 hypothetical protein phrog_6456 unknown function unknown function -1 37728 38816
YP_004306438.1 NC_015266_p26 baseplate assembly protein (W) phrog_43 baseplate wedge subunit tail -1 20084 20446
YP_004306460.1 NC_015266_p48 hypothetical protein phrog_6456 unknown function unknown function -1 36570 37685
YP_004306413.1 NC_015266_p1 integrase phrog_1 integrase integration and excision -1 122 1150
YP_004306453.1 NC_015266_p41 terminase ATPase subunit (P) phrog_2 terminase large subunit head and packaging 1 28345 30180
YP_004306422.1 NC_015266_p10 hypothetical protein phrog_9850 unknown function unknown function -1 6479 6682
YP_004306430.1 NC_015266_p18 tail protein (E+E') phrog_103 tail protein tail -1 13036 13508
YP_004306442.1 NC_015266_p30 tail completion protein (R) phrog_65 tail terminator connector -1 22527 22943
YP_004306418.1 NC_015266_p6 membrane protein phrog_7715 unknown function unknown function -1 5506 5700
YP_004306428.1 NC_015266_p16 tail protein (U) phrog_76 tail protein tail -1 9326 9784
YP_004306463.1 NC_015266_p51 hypothetical protein phrog_5348 unknown function unknown function -1 39523 40032
YP_004306429.1 NC_015266_p17 tail tape measure protein (T) phrog_28 tail length tape measure protein tail -1 9806 13033
YP_004306436.1 NC_015266_p24 baseplate assembly protein (I) phrog_48 tail protein tail -1 18635 19189
YP_004306455.1 NC_015266_p43 hypothetical protein singleton unknown function unknown function 1 31595 31732
YP_004306462.1 NC_015266_p50 hypothetical protein phrog_7616 unknown function unknown function -1 38822 39526
YP_004306443.1 NC_015266_p31 Rz1 (LysC) phrog_952 Rz-like spanin lysis -1 22936 23220
YP_004306457.1 NC_015266_p45 EcoRII-C endonuclease phrog_36646 restriction endonuclease II DNA, RNA and nucleotide metabolism -1 33455 34699
YP_004306439.1 NC_015266_p27 baseplate assembly protein (V) phrog_11 baseplate spike tail -1 20443 21138
YP_004306449.1 NC_015266_p37 capsid completion protein (L) phrog_71 head-tail adaptor Ad1 connector -1 25140 25619
YP_004306441.1 NC_015266_p29 tail completion protein (S) phrog_26 tail completion or Neck1 protein connector -1 22060 22527
YP_004306434.1 NC_015266_p22 tail fiber assembly protein phrog_105 tail fiber assembly tail -1 15328 15951
YP_004306426.1 NC_015266_p14 hypothetical protein phrog_12492 unknown function unknown function 1 7904 8179
YP_004306447.1 NC_015266_p35 antiholin phrog_198 holin lysis -1 24574 24918
YP_004306420.1 NC_015266_p8 hypothetical protein phrog_7831 unknown function unknown function -1 5943 6155
YP_004306419.1 NC_015266_p7 hypothetical protein phrog_6236 unknown function unknown function -1 5744 5938
YP_004306440.1 NC_015266_p28 N-4/N-6 DNA methylase phrog_67 DNA methyltransferase other 1 21304 22080
YP_004306417.1 NC_015266_p5 hypothetical protein phrog_7408 unknown function unknown function -1 5139 5501
YP_004306459.1 NC_015266_p47 EcoRII DNA cytosine methylase phrog_116 DNA methyltransferase other -1 35142 36410
YP_004306425.1 NC_015266_p13 repressor phrog_8 transcriptional regulator transcription regulation 1 7193 7732
YP_004306415.1 NC_015266_p3 zinc finger CHC2-family protein phrog_5629 DNA primase DNA, RNA and nucleotide metabolism -1 2096 4891
YP_004306445.1 NC_015266_p33 endolysin phrog_1224 endolysin head and packaging -1 23494 24303
YP_004306427.1 NC_015266_p15 tail protein (D) phrog_52 tail protein tail -1 8238 9329
YP_004306454.1 NC_015266_p42 portal vertex protein (Q) phrog_68 portal protein head and packaging 1 30177 31226
YP_004306450.1 NC_015266_p38 terminase endonuclease subunit (M) phrog_74 terminase small subunit head and packaging -1 25719 26408
YP_004306444.1 NC_015266_p32 Rz (LysB) phrog_89 Rz-like spanin lysis -1 23057 23497
YP_004306437.1 NC_015266_p25 baseplate assembly protein (J) phrog_6 baseplate wedge subunit tail -1 19182 20087