Genomic map of Pseudomonas phage PAK_P1 (NC_015294)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_015294
Definition
Pseudomonas phage PAK_P1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Pakpunavirus.
DB of origin
REFSEQ
Length
93198
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
181
%GC
49.49
Number of singletons
7
Number of paralogs
6

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_004327150.1 NC_015294_p135 hypothetical protein phrog_7453 unknown function unknown function -1 71114 71791
YP_004327177.1 NC_015294_p161 hypothetical protein phrog_2686 unknown function unknown function -1 83601 84065
YP_004327242.1 NC_015294_p54 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 32683 34545
YP_008869210.1 NC_015294_p176 hypothetical protein phrog_10364 unknown function unknown function 1 89855 90043
YP_004327285.1 NC_015294_p103 hypothetical protein phrog_7133 unknown function unknown function 1 58299 58682
YP_004327221.1 NC_015294_p27 tail fiber protein phrog_2282 tail fiber protein tail 1 21530 23029
YP_008869193.1 NC_015294_p118 hypothetical protein phrog_5680 unknown function unknown function 1 63987 64514
YP_004327181.1 NC_015294_p165 hypothetical protein phrog_2251 unknown function unknown function -1 85937 86149
YP_004327290.1 NC_015294_p110 hypothetical protein phrog_4261 unknown function unknown function 1 60785 61099
YP_004327219.1 NC_015294_p25 tail fiber protein phrog_2282 tail fiber protein tail 1 19086 21104
YP_008869212.1 NC_015294_p180 hypothetical protein phrog_21530 unknown function unknown function -1 91819 91935
YP_004327193.1 NC_015294_p178 hypothetical protein singleton unknown function unknown function 1 90676 90870
YP_004327291.1 NC_015294_p111 hypothetical protein phrog_6913 unknown function unknown function 1 61096 61320
YP_008869185.1 NC_015294_p97 hypothetical protein phrog_6871 unknown function unknown function 1 56803 57090
YP_004327174.1 NC_015294_p159 hypothetical protein phrog_938 endolysin lysis -1 82651 83211
YP_004327170.1 NC_015294_p155 hypothetical protein phrog_5447 unknown function unknown function -1 80864 81100
YP_004327152.1 NC_015294_p138 hypothetical protein phrog_2614 unknown function unknown function -1 72371 72733
YP_004327202.1 NC_015294_p9 hypothetical protein phrog_939 head protein head and packaging 1 6860 7240
YP_004327294.1 NC_015294_p114 hypothetical protein phrog_3303 unknown function unknown function 1 62123 62704
YP_004327292.1 NC_015294_p112 hypothetical protein phrog_4025 unknown function unknown function 1 61353 61619
YP_004327185.1 NC_015294_p170 hypothetical protein phrog_7505 unknown function unknown function -1 87311 87496
YP_008869209.1 NC_015294_p175 hypothetical protein phrog_5019 unknown function unknown function -1 88913 89380
YP_004327217.1 NC_015294_p23 hypothetical protein phrog_6 baseplate wedge subunit tail 1 16869 18332
YP_004327206.1 NC_015294_p13 hypothetical protein phrog_280 virion structural protein head and packaging 1 9729 10229
YP_004327265.1 NC_015294_p79 ribonucleotide-diphosphate reductase alpha subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 48667 50412
YP_004327168.1 NC_015294_p153 hypothetical protein phrog_944 membrane protein moron, auxiliary metabolic gene and host takeover -1 80183 80590
YP_004327286.1 NC_015294_p105 hypothetical protein phrog_2554 unknown function unknown function 1 58941 59612
YP_008869191.1 NC_015294_p108 hypothetical protein phrog_15780 unknown function unknown function 1 60386 60499
YP_004327239.1 NC_015294_p48 hypothetical protein phrog_7141 unknown function unknown function 1 31346 31768
YP_004327256.1 NC_015294_p67 hypothetical protein phrog_4305 unknown function unknown function 1 43062 43229
YP_004327157.1 NC_015294_p143 hypothetical protein phrog_768 DprA-like DNA recombination-mediator protein DNA, RNA and nucleotide metabolism -1 74231 74812
YP_004327178.1 NC_015294_p162 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 84078 85286
YP_004327204.1 NC_015294_p11 hypothetical protein phrog_205 tail sheath tail 1 7813 9099
YP_008869205.1 NC_015294_p140 hypothetical protein phrog_6967 unknown function unknown function -1 73002 73343
YP_004327169.1 NC_015294_p154 hypothetical protein phrog_2339 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 80587 80862
YP_004327280.1 NC_015294_p96 hypothetical protein phrog_6353 unknown function unknown function 1 56660 56803
YP_004327171.1 NC_015294_p156 phosphoesterase domain containing protein phrog_547 phosphoesterase other -1 81102 81668
YP_008869202.1 NC_015294_p132 hypothetical protein phrog_7340 unknown function unknown function -1 69947 70225
YP_008869157.1 NC_015294_p30 hypothetical protein phrog_4349 Rz-like spanin lysis 1 23913 24308
YP_004327263.1 NC_015294_p77 hypothetical protein phrog_3506 thymidylate synthase DNA, RNA and nucleotide metabolism 1 47267 47611
YP_004327229.1 NC_015294_p38 hypothetical protein phrog_968 RNA ligase DNA, RNA and nucleotide metabolism -1 26743 27885
YP_008869206.1 NC_015294_p141 hypothetical protein phrog_3360 unknown function unknown function -1 73345 73821
YP_004327163.1 NC_015294_p149 hypothetical protein phrog_7663 unknown function unknown function -1 77720 77941
YP_004327213.1 NC_015294_p19 hypothetical protein phrog_349 virion structural protein head and packaging 1 14479 14835
YP_008869163.1 NC_015294_p39 hypothetical protein phrog_4794 unknown function unknown function -1 27917 28150
YP_008869189.1 NC_015294_p106 hypothetical protein phrog_5336 unknown function unknown function 1 59617 59955
YP_004327236.1 NC_015294_p45 hypothetical protein phrog_7101 unknown function unknown function 1 30224 30889
YP_008869184.1 NC_015294_p94 hypothetical protein phrog_3768 unknown function unknown function 1 55817 56290
YP_004327255.1 NC_015294_p66 hypothetical protein phrog_7013 unknown function unknown function 1 42628 43065
YP_008869198.1 NC_015294_p123 hypothetical protein phrog_3968 unknown function unknown function 1 65747 65977
YP_004327198.1 NC_015294_p5 hypothetical protein phrog_49 head decoration head and packaging 1 4395 4805
YP_008869204.1 NC_015294_p136 hypothetical protein singleton unknown function unknown function -1 71794 72015
YP_008869181.1 NC_015294_p91 hypothetical protein phrog_6076 unknown function unknown function 1 53452 53652
YP_004327260.1 NC_015294_p73 hypothetical protein phrog_7016 unknown function unknown function 1 44955 45167
YP_008869164.1 NC_015294_p40 hypothetical protein phrog_464 unknown function unknown function 1 28549 28866
YP_004327282.1 NC_015294_p99 hypothetical protein phrog_6265 unknown function unknown function 1 57406 57534
YP_004327159.1 NC_015294_p145 hypothetical protein phrog_6391 unknown function unknown function -1 75128 75277
YP_004327175.1 NC_015294_p160 hypothetical protein phrog_4848 unknown function unknown function -1 83258 83599
YP_004327284.1 NC_015294_p101 hypothetical protein phrog_4323 unknown function unknown function 1 57916 58062
YP_004327249.1 NC_015294_p60 hypothetical protein phrog_7883 unknown function unknown function 1 39885 40118
YP_004327274.1 NC_015294_p90 hypothetical protein phrog_5041 unknown function unknown function 1 53149 53379
YP_004327234.1 NC_015294_p43 hypothetical protein phrog_2834 unknown function unknown function 1 29582 29836
YP_004327237.1 NC_015294_p46 hypothetical protein phrog_6917 unknown function unknown function 1 30876 31040
YP_004327262.1 NC_015294_p76 hypothetical protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 46317 47264
YP_004327184.1 NC_015294_p169 hypothetical protein phrog_7048 unknown function unknown function -1 87030 87308
YP_004327158.1 NC_015294_p144 hypothetical protein phrog_8023 unknown function unknown function -1 74809 75126
YP_004327180.1 NC_015294_p164 hypothetical protein phrog_7094 unknown function unknown function -1 85702 85926
YP_008869162.1 NC_015294_p37 hypothetical protein phrog_7461 unknown function unknown function -1 26582 26740
YP_004327264.1 NC_015294_p78 ribonucleotide-diphosphate reductase beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 47628 48674
YP_004327293.1 NC_015294_p113 hypothetical protein phrog_6935 unknown function unknown function 1 61616 62008
YP_008869195.1 NC_015294_p120 hypothetical protein phrog_6876 unknown function unknown function 1 64823 64987
YP_004327183.1 NC_015294_p168 hypothetical protein phrog_6991 unknown function unknown function -1 86755 87033
YP_004327272.1 NC_015294_p88 hypothetical protein phrog_6974 unknown function unknown function 1 52461 52943
YP_008869199.1 NC_015294_p127 hypothetical protein phrog_13569 unknown function unknown function 1 66966 67103
YP_004327210.1 NC_015294_p17 tape measure protein phrog_991 tail length tape measure protein tail 1 11357 13717
YP_004327246.1 NC_015294_p58 hypothetical protein phrog_6824 unknown function unknown function 1 38006 38716
YP_008869156.1 NC_015294_p28 hypothetical protein phrog_2860 endolysin head and packaging 1 23046 23606
YP_004327232.1 NC_015294_p41 hypothetical protein phrog_6163 unknown function unknown function 1 28863 29060
YP_008869176.1 NC_015294_p70 hypothetical protein phrog_7135 unknown function unknown function 1 44186 44368
YP_004327270.1 NC_015294_p86 hypothetical protein phrog_7233 unknown function unknown function 1 51969 52154
YP_004327303.1 NC_015294_p126 hypothetical protein phrog_4310 unknown function unknown function 1 66721 66915
YP_008869170.1 NC_015294_p55 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 34606 37320
YP_004327162.1 NC_015294_p148 nicotinamide phosphoribosyltransferase family protein phrog_448 nicotinamide phosphoribosyl transferase other -1 75975 77663
YP_008869177.1 NC_015294_p75 hypothetical protein phrog_9669 unknown function unknown function 1 46146 46262
YP_004327172.1 NC_015294_p157 hypothetical protein phrog_6781 unknown function unknown function -1 81668 82099
YP_008869166.1 NC_015294_p49 hypothetical protein phrog_18296 unknown function unknown function 1 31777 31893
YP_004327216.1 NC_015294_p22 hypothetical protein phrog_120 baseplate wedge subunit tail 1 16496 16867
YP_004327252.1 NC_015294_p63 hypothetical protein phrog_1985 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41440 42003
YP_004327194.1 NC_015294_p1 terminase large subunit phrog_979 terminase large subunit head and packaging 1 1 1521
YP_004327297.1 NC_015294_p117 hypothetical protein phrog_1106 unknown function unknown function 1 63418 63900
YP_004327223.1 NC_015294_p29 hypothetical protein phrog_5847 holin lysis 1 23624 23878
YP_004327188.1 NC_015294_p173 hypothetical protein phrog_1827 ATP-dependent protease other -1 87964 88512
YP_004327208.1 NC_015294_p15 hypothetical protein phrog_1613 tail assembly chaperone tail 1 10729 11100
YP_008869203.1 NC_015294_p133 hypothetical protein phrog_7262 unknown function unknown function -1 70218 70664
YP_008869208.1 NC_015294_p171 hypothetical protein phrog_343 unknown function unknown function -1 87497 87721
YP_004327261.1 NC_015294_p74 hypothetical protein phrog_7063 3'-phosphatase, 5'-polynucleotide kinase other 1 45160 46110
YP_004327147.1 NC_015294_p131 hypothetical protein singleton unknown function unknown function 1 69227 69862
YP_004327197.1 NC_015294_p4 hypothetical protein phrog_4103 unknown function unknown function 1 3450 4367
YP_008869213.1 NC_015294_p181 hypothetical protein singleton unknown function unknown function -1 92596 92994
YP_008869187.1 NC_015294_p102 hypothetical protein phrog_14281 unknown function unknown function 1 58157 58306
YP_004327200.1 NC_015294_p7 hypothetical protein phrog_1732 unknown function unknown function 1 5933 6409
YP_008869192.1 NC_015294_p109 hypothetical protein phrog_6818 unknown function unknown function 1 60571 60765
YP_004327220.1 NC_015294_p26 hypothetical protein phrog_4628 tail fiber assembly tail 1 21141 21518
YP_004327226.1 NC_015294_p34 hypothetical protein phrog_2827 unknown function unknown function -1 25131 25442
YP_004327192.1 NC_015294_p177 hypothetical protein phrog_3900 unknown function unknown function 1 90186 90509
YP_004327203.1 NC_015294_p10 hypothetical protein phrog_4087 unknown function unknown function 1 7237 7800
YP_004327302.1 NC_015294_p125 hypothetical protein phrog_11201 unknown function unknown function 1 66355 66621
YP_004327296.1 NC_015294_p116 hypothetical protein phrog_4261 unknown function unknown function 1 63034 63363
YP_008869183.1 NC_015294_p93 hypothetical protein phrog_8175 unknown function unknown function 1 55019 55192
YP_004327253.1 NC_015294_p64 hypothetical protein phrog_5822 unknown function unknown function 1 42000 42398
YP_008869168.1 NC_015294_p52 hypothetical protein phrog_6115 unknown function unknown function 1 32202 32447
YP_004327182.1 NC_015294_p167 hypothetical protein phrog_3948 unknown function unknown function -1 86424 86774
YP_004327269.1 NC_015294_p85 hypothetical protein phrog_17860 unknown function unknown function 1 51613 51963
YP_008869169.1 NC_015294_p53 hypothetical protein phrog_7863 unknown function unknown function 1 32444 32629
YP_004327160.1 NC_015294_p146 hypothetical protein phrog_335 phosphatase other -1 75290 75769
YP_004327268.1 NC_015294_p84 hypothetical protein phrog_7635 unknown function unknown function 1 51336 51611
YP_004327164.1 NC_015294_p150 ribose-phosphate pyrophosphokinase phrog_619 ribose-phosphate pyrophosphokinase other -1 77938 78813
YP_004327215.1 NC_015294_p21 hypothetical protein phrog_11 baseplate spike tail 1 15746 16486
YP_008869161.1 NC_015294_p36 hypothetical protein phrog_6945 unknown function unknown function -1 25777 26589
YP_004327173.1 NC_015294_p158 hypothetical protein phrog_990 metal-dependent phosphohydrolase other -1 82089 82649
YP_004327225.1 NC_015294_p32 hypothetical protein phrog_4172 unknown function unknown function 1 24440 24745
YP_004327279.1 NC_015294_p95 hypothetical protein phrog_5201 unknown function unknown function 1 56378 56647
YP_008869182.1 NC_015294_p92 hypothetical protein phrog_6266 unknown function unknown function 1 53810 54796
YP_004327179.1 NC_015294_p163 CMP/dCMP deaminase, zinc-binding phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 85283 85699
YP_008869200.1 NC_015294_p128 hypothetical protein phrog_9686 unknown function unknown function 1 67135 67293
YP_004327259.1 NC_015294_p72 hypothetical protein phrog_6971 unknown function unknown function 1 44616 44951
YP_008869197.1 NC_015294_p122 hypothetical protein phrog_7753 unknown function unknown function 1 65269 65727
YP_004327241.1 NC_015294_p51 hypothetical protein phrog_7814 unknown function unknown function 1 32001 32192
YP_004327199.1 NC_015294_p6 major capsid protein phrog_29 major head protein head and packaging 1 4850 5884
YP_004327196.1 NC_015294_p3 hypothetical protein phrog_1530 DNA methyltransferase other 1 2983 3453
YP_008869175.1 NC_015294_p69 hypothetical protein phrog_221 metallo-phosphoesterase other 1 43410 44189
YP_008869167.1 NC_015294_p50 hypothetical protein phrog_6310 unknown function unknown function 1 31886 32014
YP_004327238.1 NC_015294_p47 hypothetical protein phrog_4991 unknown function unknown function 1 31043 31345
YP_004327151.1 NC_015294_p137 hypothetical protein phrog_7430 unknown function unknown function -1 72060 72371
YP_004327212.1 NC_015294_p18 hypothetical protein phrog_817 tail fiber protein tail 1 13714 14475
YP_004327248.1 NC_015294_p59 hypothetical protein phrog_2544 unknown function unknown function 1 38818 39822
YP_004327167.1 NC_015294_p152 RNA ligase/tail attachment protein phrog_562 RNA ligase and tail fiber protein attachment catalyst tail -1 79254 80171
YP_004327250.1 NC_015294_p61 hypothetical protein phrog_6983 unknown function unknown function 1 40125 40349
YP_008869186.1 NC_015294_p98 hypothetical protein phrog_5289 unknown function unknown function 1 57102 57335
YP_008869190.1 NC_015294_p107 hypothetical protein phrog_7542 unknown function unknown function 1 59955 60308
YP_008869160.1 NC_015294_p35 hypothetical protein phrog_7083 unknown function unknown function -1 25455 25775
YP_008869165.1 NC_015294_p42 hypothetical protein phrog_3754 unknown function unknown function 1 29063 29548
YP_004327258.1 NC_015294_p71 hypothetical protein phrog_6873 unknown function unknown function 1 44388 44597
YP_004327235.1 NC_015294_p44 hypothetical protein phrog_4256 unknown function unknown function 1 29838 30227
YP_008869179.1 NC_015294_p81 hypothetical protein phrog_343 unknown function unknown function 1 50627 50863
YP_008869178.1 NC_015294_p80 hypothetical protein phrog_5604 unknown function unknown function 1 50487 50630
YP_004327301.1 NC_015294_p124 hypothetical protein phrog_5746 unknown function unknown function 1 65974 66261
YP_004327195.1 NC_015294_p2 hypothetical protein phrog_113 portal protein head and packaging 1 1534 2973
YP_008869158.1 NC_015294_p31 hypothetical protein phrog_5388 Rz-like spanin lysis 1 24319 24450
YP_008869159.1 NC_015294_p33 hypothetical protein phrog_3899 unknown function unknown function 1 24780 25094
YP_004327187.1 NC_015294_p172 hypothetical protein phrog_6961 unknown function unknown function -1 87718 87903
YP_008869196.1 NC_015294_p121 hypothetical protein phrog_7181 unknown function unknown function 1 65057 65245
YP_004327267.1 NC_015294_p83 hypothetical protein phrog_7088 unknown function unknown function 1 51100 51339
YP_008869201.1 NC_015294_p129 hypothetical protein phrog_7991 unknown function unknown function -1 67787 67924
YP_008869155.1 NC_015294_p14 hypothetical protein phrog_280 virion structural protein head and packaging 1 10231 10710
YP_004327189.1 NC_015294_p174 hypothetical protein phrog_5067 unknown function unknown function -1 88560 88916
YP_004327273.1 NC_015294_p89 hypothetical protein phrog_6846 unknown function unknown function 1 52953 53147
YP_004327156.1 NC_015294_p142 hypothetical protein phrog_6932 unknown function unknown function -1 73835 74212
YP_004327271.1 NC_015294_p87 hypothetical protein phrog_6863 unknown function unknown function 1 52200 52439
YP_004327153.1 NC_015294_p139 hypothetical protein phrog_7178 unknown function unknown function -1 72790 73005
YP_008869172.1 NC_015294_p62 exodeoxyribonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 40391 41443
YP_008869171.1 NC_015294_p56 hypothetical protein phrog_3878 unknown function unknown function 1 37410 37808
YP_004327295.1 NC_015294_p115 hypothetical protein phrog_6091 unknown function unknown function 1 62777 63022
YP_008869207.1 NC_015294_p166 hypothetical protein phrog_5276 unknown function unknown function -1 86146 86415
YP_008869188.1 NC_015294_p104 hypothetical protein singleton unknown function unknown function 1 58754 58876
YP_004327149.1 NC_015294_p134 hypothetical protein phrog_6773 unknown function unknown function -1 70654 71070
YP_008869154.1 NC_015294_p8 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 6447 6860
YP_004327165.1 NC_015294_p151 hypothetical protein phrog_2071 ATPase other -1 78824 79243
YP_004327209.1 NC_015294_p16 hypothetical protein singleton unknown function unknown function 1 11166 11360
YP_004327218.1 NC_015294_p24 hypothetical protein phrog_587 structural protein head and packaging 1 18344 19075
YP_008869180.1 NC_015294_p82 hypothetical protein phrog_6898 unknown function unknown function 1 50863 51084
YP_004327245.1 NC_015294_p57 hypothetical protein phrog_7532 unknown function unknown function 1 37837 38004
YP_008869211.1 NC_015294_p179 hypothetical protein singleton unknown function unknown function -1 91502 91681
YP_004327146.1 NC_015294_p130 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism 1 68097 68699
YP_008869174.1 NC_015294_p68 hypothetical protein phrog_4305 unknown function unknown function 1 43231 43413
YP_008869194.1 NC_015294_p119 hypothetical protein phrog_6605 unknown function unknown function 1 64583 64795
YP_004327161.1 NC_015294_p147 hypothetical protein phrog_6997 unknown function unknown function -1 75766 75963
YP_004327214.1 NC_015294_p20 hypothetical protein phrog_196 baseplate hub tail 1 14832 15749
YP_004327283.1 NC_015294_p100 hypothetical protein phrog_2267 unknown function unknown function 1 57534 57842
YP_008869173.1 NC_015294_p65 hypothetical protein phrog_7621 unknown function unknown function 1 42395 42631
YP_004327205.1 NC_015294_p12 hypothetical protein phrog_280 virion structural protein head and packaging 1 9130 9654