| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_015295 |
Definition |
Erwinia phage phiEt88, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae. |
DB of origin |
REFSEQ |
Length |
47279 |
Host Name |
Erwinia |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
68 |
%GC |
47.32 |
Number of singletons |
13 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_004327311.1 | NC_015295_p8 | hypothetical protein | phrog_1989 | unknown function | unknown function | 1 | 6746 | 7261 |
| YP_004327308.1 | NC_015295_p5 | portal protein | phrog_146 | portal protein | head and packaging | 1 | 3474 | 4724 |
| YP_004327310.1 | NC_015295_p7 | hypothetical protein | phrog_530 | head maturation protease | head and packaging | 1 | 5655 | 6746 |
| YP_004327339.1 | NC_015295_p36 | hypothetical protein | phrog_154 | replication initiation protein | DNA, RNA and nucleotide metabolism | -1 | 27729 | 27998 |
| YP_004327305.1 | NC_015295_p2 | hypothetical protein | phrog_129 | transcriptional regulator | transcription regulation | 1 | 627 | 1196 |
| YP_004327351.1 | NC_015295_p48 | hypothetical protein | phrog_35 | transcriptional repressor | transcription regulation | 1 | 34635 | 34862 |
| YP_004327360.1 | NC_015295_p57 | hypothetical protein | phrog_667 | unknown function | unknown function | 1 | 40067 | 40324 |
| YP_004327337.1 | NC_015295_p34 | hypothetical protein | phrog_7798 | unknown function | unknown function | -1 | 26891 | 27520 |
| YP_004327317.1 | NC_015295_p14 | hypothetical protein | phrog_7975 | tail terminator | connector | 1 | 9639 | 10184 |
| YP_004327349.1 | NC_015295_p46 | hypothetical protein | phrog_13686 | unknown function | unknown function | -1 | 33042 | 33515 |
| YP_004327345.1 | NC_015295_p42 | hypothetical protein | phrog_3486 | unknown function | unknown function | -1 | 30936 | 31247 |
| YP_004327326.1 | NC_015295_p23 | hypothetical protein | phrog_120 | baseplate wedge subunit | tail | 1 | 16823 | 17164 |
| YP_004327350.1 | NC_015295_p47 | phage repressor protein | phrog_4 | transcriptional repressor | transcription regulation | -1 | 33818 | 34528 |
| YP_004327335.1 | NC_015295_p32 | probable excisionase HkaC | phrog_66 | excisionase and transcriptional regulator | integration and excision | -1 | 26092 | 26298 |
| YP_004327362.1 | NC_015295_p59 | DNA N-6-adenine-methyltransferase | phrog_111 | DNA methyltransferase | other | 1 | 41301 | 41846 |
| YP_004327340.1 | NC_015295_p37 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28068 | 28355 |
| YP_004327348.1 | NC_015295_p45 | hypothetical protein | phrog_15754 | unknown function | unknown function | -1 | 32710 | 32859 |
| YP_004327320.1 | NC_015295_p17 | hypothetical protein | phrog_1613 | tail assembly chaperone | tail | 1 | 12024 | 12461 |
| YP_004327321.1 | NC_015295_p18 | phage tail tape measure protein | phrog_3981 | tail length tape measure protein | tail | 1 | 12624 | 14198 |
| YP_004327318.1 | NC_015295_p15 | hypothetical protein | phrog_205 | tail sheath | tail | 1 | 10199 | 11539 |
| YP_004327364.1 | NC_015295_p61 | hypothetical protein | phrog_131 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 42224 | 42517 |
| YP_004327313.1 | NC_015295_p10 | hypothetical protein | phrog_17409 | unknown function | unknown function | 1 | 8243 | 8446 |
| YP_004327324.1 | NC_015295_p21 | hypothetical protein | phrog_196 | baseplate hub | tail | 1 | 15250 | 16152 |
| YP_004327315.1 | NC_015295_p12 | hypothetical protein | phrog_222 | tail completion or Neck1 protein | connector | 1 | 8844 | 9305 |
| YP_004327342.1 | NC_015295_p39 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28826 | 29158 |
| YP_004327356.1 | NC_015295_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38473 | 38691 |
| YP_004327355.1 | NC_015295_p52 | hypothetical protein | phrog_5692 | unknown function | unknown function | 1 | 38180 | 38476 |
| YP_004327332.1 | NC_015295_p29 | hypothetical protein | singleton | unknown function | unknown function | -1 | 22290 | 23762 |
| YP_004327370.1 | NC_015295_p67 | hypothetical protein | phrog_11282 | unknown function | unknown function | -1 | 45915 | 46373 |
| YP_004327347.1 | NC_015295_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32339 | 32695 |
| YP_004327304.1 | NC_015295_p1 | endopeptidase (lysis protein) | phrog_13 | Rz-like spanin | lysis | 1 | 6 | 452 |
| YP_004327319.1 | NC_015295_p16 | hypothetical protein | phrog_280 | virion structural protein | head and packaging | 1 | 11542 | 11988 |
| YP_004327336.1 | NC_015295_p33 | hypothetical protein | singleton | unknown function | unknown function | -1 | 26380 | 26697 |
| YP_004327327.1 | NC_015295_p24 | baseplate component | phrog_6 | baseplate wedge subunit | tail | 1 | 17227 | 18645 |
| YP_004327309.1 | NC_015295_p6 | phage head morphogenesis protein | phrog_324 | head morphogenesis | head and packaging | 1 | 4728 | 5540 |
| YP_004327312.1 | NC_015295_p9 | hypothetical protein | phrog_264 | major head protein | head and packaging | 1 | 7272 | 8204 |
| YP_004327330.1 | NC_015295_p27 | tail fiber protein | phrog_5717 | tail protein | tail | 1 | 19632 | 20276 |
| YP_004327316.1 | NC_015295_p13 | hypothetical protein | phrog_939 | head protein | head and packaging | 1 | 9302 | 9646 |
| YP_004327346.1 | NC_015295_p43 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31963 | 32253 |
| YP_004327334.1 | NC_015295_p31 | phage integrase family site-specific recombinase | phrog_1 | integrase | integration and excision | -1 | 24654 | 25826 |
| YP_004327329.1 | NC_015295_p26 | hypothetical protein | phrog_24124 | unknown function | unknown function | 1 | 19397 | 19639 |
| YP_004327363.1 | NC_015295_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41843 | 42115 |
| YP_004327306.1 | NC_015295_p3 | phage terminase, small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 1475 | 1909 |
| YP_004327341.1 | NC_015295_p38 | similar to Eae protein | phrog_14548 | unknown function | unknown function | -1 | 28352 | 28672 |
| YP_004327357.1 | NC_015295_p54 | hypothetical protein | phrog_17934 | unknown function | unknown function | 1 | 38747 | 39022 |
| YP_004327366.1 | NC_015295_p63 | hypothetical protein | phrog_3496 | unknown function | unknown function | 1 | 42992 | 43219 |
| YP_004327323.1 | NC_015295_p20 | hypothetical protein | phrog_349 | virion structural protein | head and packaging | 1 | 14901 | 15242 |
| YP_004327368.1 | NC_015295_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44218 | 44367 |
| YP_004327307.1 | NC_015295_p4 | terminase, large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 1906 | 3465 |
| YP_004327325.1 | NC_015295_p22 | phage baseplate assembly protein V | phrog_11 | baseplate spike | tail | 1 | 16152 | 16823 |
| YP_004327359.1 | NC_015295_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39635 | 39982 |
| YP_004327369.1 | NC_015295_p66 | hypothetical protein | singleton | unknown function | unknown function | -1 | 44848 | 45705 |
| YP_004327358.1 | NC_015295_p55 | hypothetical protein | phrog_444 | unknown function | unknown function | 1 | 39022 | 39300 |
| YP_004327328.1 | NC_015295_p25 | hypothetical protein | phrog_6277 | unknown function | unknown function | 1 | 18638 | 19390 |
| YP_004327344.1 | NC_015295_p41 | exodeoxyribonuclease | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | -1 | 30118 | 30936 |
| YP_004327338.1 | NC_015295_p35 | hypothetical protein | phrog_54 | DksA-like zinc-finger protein | other | -1 | 27517 | 27732 |
| YP_004327361.1 | NC_015295_p58 | NinB protein | phrog_72 | NinB/ Orf homologous recombination mediator | DNA, RNA and nucleotide metabolism | 1 | 40864 | 41304 |
| YP_004327367.1 | NC_015295_p64 | Antitermination protein | phrog_127 | anti-termination protein Q-like | transcription regulation | 1 | 43216 | 44037 |
| YP_004327352.1 | NC_015295_p49 | predicted regulatory protein | phrog_191 | CII-like transcriptional activator | transcription regulation | 1 | 35007 | 35303 |
| YP_004327353.1 | NC_015295_p50 | phage replication protein O | phrog_277 | replication initiation O-like | DNA, RNA and nucleotide metabolism | 1 | 35462 | 36553 |
| YP_004327314.1 | NC_015295_p11 | hypothetical protein | phrog_302 | virion structural protein | head and packaging | 1 | 8446 | 8853 |
| YP_004327333.1 | NC_015295_p30 | hypothetical protein | singleton | unknown function | unknown function | -1 | 23794 | 24474 |
| YP_004327322.1 | NC_015295_p19 | hypothetical protein | phrog_817 | tail fiber protein | tail | 1 | 14200 | 14904 |
| YP_004327365.1 | NC_015295_p62 | crossover junction endodeoxyribonuclease | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 42514 | 42879 |
| YP_004327354.1 | NC_015295_p51 | Replicative DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 36550 | 37926 |
| YP_004327371.1 | NC_015295_p68 | holin | phrog_126 | holin/anti-holin | lysis | 1 | 46553 | 46876 |
| YP_004327343.1 | NC_015295_p40 | DNA single-strand annealing protein RecT-like | phrog_561 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 29243 | 30121 |
| YP_004327331.1 | NC_015295_p28 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20276 | 22252 |