Genomic map of Erwinia phage phiEt88 (NC_015295)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_015295
Definition
Erwinia phage phiEt88, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
DB of origin
REFSEQ
Length
47279
Host Name
Erwinia
Host domain
Bacteria
Is prophage?
undef
Number of proteins
68
%GC
47.32
Number of singletons
13
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_004327311.1 NC_015295_p8 hypothetical protein phrog_1989 unknown function unknown function 1 6746 7261
YP_004327308.1 NC_015295_p5 portal protein phrog_146 portal protein head and packaging 1 3474 4724
YP_004327310.1 NC_015295_p7 hypothetical protein phrog_530 head maturation protease head and packaging 1 5655 6746
YP_004327339.1 NC_015295_p36 hypothetical protein phrog_154 replication initiation protein DNA, RNA and nucleotide metabolism -1 27729 27998
YP_004327305.1 NC_015295_p2 hypothetical protein phrog_129 transcriptional regulator transcription regulation 1 627 1196
YP_004327351.1 NC_015295_p48 hypothetical protein phrog_35 transcriptional repressor transcription regulation 1 34635 34862
YP_004327360.1 NC_015295_p57 hypothetical protein phrog_667 unknown function unknown function 1 40067 40324
YP_004327337.1 NC_015295_p34 hypothetical protein phrog_7798 unknown function unknown function -1 26891 27520
YP_004327317.1 NC_015295_p14 hypothetical protein phrog_7975 tail terminator connector 1 9639 10184
YP_004327349.1 NC_015295_p46 hypothetical protein phrog_13686 unknown function unknown function -1 33042 33515
YP_004327345.1 NC_015295_p42 hypothetical protein phrog_3486 unknown function unknown function -1 30936 31247
YP_004327326.1 NC_015295_p23 hypothetical protein phrog_120 baseplate wedge subunit tail 1 16823 17164
YP_004327350.1 NC_015295_p47 phage repressor protein phrog_4 transcriptional repressor transcription regulation -1 33818 34528
YP_004327335.1 NC_015295_p32 probable excisionase HkaC phrog_66 excisionase and transcriptional regulator integration and excision -1 26092 26298
YP_004327362.1 NC_015295_p59 DNA N-6-adenine-methyltransferase phrog_111 DNA methyltransferase other 1 41301 41846
YP_004327340.1 NC_015295_p37 hypothetical protein singleton unknown function unknown function -1 28068 28355
YP_004327348.1 NC_015295_p45 hypothetical protein phrog_15754 unknown function unknown function -1 32710 32859
YP_004327320.1 NC_015295_p17 hypothetical protein phrog_1613 tail assembly chaperone tail 1 12024 12461
YP_004327321.1 NC_015295_p18 phage tail tape measure protein phrog_3981 tail length tape measure protein tail 1 12624 14198
YP_004327318.1 NC_015295_p15 hypothetical protein phrog_205 tail sheath tail 1 10199 11539
YP_004327364.1 NC_015295_p61 hypothetical protein phrog_131 HNH endonuclease DNA, RNA and nucleotide metabolism 1 42224 42517
YP_004327313.1 NC_015295_p10 hypothetical protein phrog_17409 unknown function unknown function 1 8243 8446
YP_004327324.1 NC_015295_p21 hypothetical protein phrog_196 baseplate hub tail 1 15250 16152
YP_004327315.1 NC_015295_p12 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 8844 9305
YP_004327342.1 NC_015295_p39 hypothetical protein singleton unknown function unknown function 1 28826 29158
YP_004327356.1 NC_015295_p53 hypothetical protein singleton unknown function unknown function 1 38473 38691
YP_004327355.1 NC_015295_p52 hypothetical protein phrog_5692 unknown function unknown function 1 38180 38476
YP_004327332.1 NC_015295_p29 hypothetical protein singleton unknown function unknown function -1 22290 23762
YP_004327370.1 NC_015295_p67 hypothetical protein phrog_11282 unknown function unknown function -1 45915 46373
YP_004327347.1 NC_015295_p44 hypothetical protein singleton unknown function unknown function 1 32339 32695
YP_004327304.1 NC_015295_p1 endopeptidase (lysis protein) phrog_13 Rz-like spanin lysis 1 6 452
YP_004327319.1 NC_015295_p16 hypothetical protein phrog_280 virion structural protein head and packaging 1 11542 11988
YP_004327336.1 NC_015295_p33 hypothetical protein singleton unknown function unknown function -1 26380 26697
YP_004327327.1 NC_015295_p24 baseplate component phrog_6 baseplate wedge subunit tail 1 17227 18645
YP_004327309.1 NC_015295_p6 phage head morphogenesis protein phrog_324 head morphogenesis head and packaging 1 4728 5540
YP_004327312.1 NC_015295_p9 hypothetical protein phrog_264 major head protein head and packaging 1 7272 8204
YP_004327330.1 NC_015295_p27 tail fiber protein phrog_5717 tail protein tail 1 19632 20276
YP_004327316.1 NC_015295_p13 hypothetical protein phrog_939 head protein head and packaging 1 9302 9646
YP_004327346.1 NC_015295_p43 hypothetical protein singleton unknown function unknown function -1 31963 32253
YP_004327334.1 NC_015295_p31 phage integrase family site-specific recombinase phrog_1 integrase integration and excision -1 24654 25826
YP_004327329.1 NC_015295_p26 hypothetical protein phrog_24124 unknown function unknown function 1 19397 19639
YP_004327363.1 NC_015295_p60 hypothetical protein singleton unknown function unknown function 1 41843 42115
YP_004327306.1 NC_015295_p3 phage terminase, small subunit phrog_51 terminase small subunit head and packaging 1 1475 1909
YP_004327341.1 NC_015295_p38 similar to Eae protein phrog_14548 unknown function unknown function -1 28352 28672
YP_004327357.1 NC_015295_p54 hypothetical protein phrog_17934 unknown function unknown function 1 38747 39022
YP_004327366.1 NC_015295_p63 hypothetical protein phrog_3496 unknown function unknown function 1 42992 43219
YP_004327323.1 NC_015295_p20 hypothetical protein phrog_349 virion structural protein head and packaging 1 14901 15242
YP_004327368.1 NC_015295_p65 hypothetical protein singleton unknown function unknown function 1 44218 44367
YP_004327307.1 NC_015295_p4 terminase, large subunit phrog_38 terminase large subunit head and packaging 1 1906 3465
YP_004327325.1 NC_015295_p22 phage baseplate assembly protein V phrog_11 baseplate spike tail 1 16152 16823
YP_004327359.1 NC_015295_p56 hypothetical protein singleton unknown function unknown function 1 39635 39982
YP_004327369.1 NC_015295_p66 hypothetical protein singleton unknown function unknown function -1 44848 45705
YP_004327358.1 NC_015295_p55 hypothetical protein phrog_444 unknown function unknown function 1 39022 39300
YP_004327328.1 NC_015295_p25 hypothetical protein phrog_6277 unknown function unknown function 1 18638 19390
YP_004327344.1 NC_015295_p41 exodeoxyribonuclease phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism -1 30118 30936
YP_004327338.1 NC_015295_p35 hypothetical protein phrog_54 DksA-like zinc-finger protein other -1 27517 27732
YP_004327361.1 NC_015295_p58 NinB protein phrog_72 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 40864 41304
YP_004327367.1 NC_015295_p64 Antitermination protein phrog_127 anti-termination protein Q-like transcription regulation 1 43216 44037
YP_004327352.1 NC_015295_p49 predicted regulatory protein phrog_191 CII-like transcriptional activator transcription regulation 1 35007 35303
YP_004327353.1 NC_015295_p50 phage replication protein O phrog_277 replication initiation O-like DNA, RNA and nucleotide metabolism 1 35462 36553
YP_004327314.1 NC_015295_p11 hypothetical protein phrog_302 virion structural protein head and packaging 1 8446 8853
YP_004327333.1 NC_015295_p30 hypothetical protein singleton unknown function unknown function -1 23794 24474
YP_004327322.1 NC_015295_p19 hypothetical protein phrog_817 tail fiber protein tail 1 14200 14904
YP_004327365.1 NC_015295_p62 crossover junction endodeoxyribonuclease phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 42514 42879
YP_004327354.1 NC_015295_p51 Replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 36550 37926
YP_004327371.1 NC_015295_p68 holin phrog_126 holin/anti-holin lysis 1 46553 46876
YP_004327343.1 NC_015295_p40 DNA single-strand annealing protein RecT-like phrog_561 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 29243 30121
YP_004327331.1 NC_015295_p28 hypothetical protein singleton unknown function unknown function 1 20276 22252