Genomic map of Propionibacterium phage PAS50 (NC_015453)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_015453
Definition
Propionibacterium phage PAS50 endogenous virus, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus.
DB of origin
REFSEQ
Length
29017
Host Name
Propionibacterium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
46
%GC
53.97
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_004414715.1 NC_015453_p10 hypothetical protein phrog_1892 minor tail protein tail 1 6737 7108
YP_004414710.1 NC_015453_p5 scaffold protein phrog_1879 head scaffolding protein head and packaging 1 4081 4635
YP_004414751.1 NC_015453_p46 endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 28663 28968
YP_004414739.1 NC_015453_p34 hypothetical protein phrog_1288 unknown function unknown function -1 22737 23201
YP_004414738.1 NC_015453_p33 DNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 21831 22694
YP_004414724.1 NC_015453_p19 tail protein phrog_1806 collagen like minor tail tail 1 14607 15269
YP_004414750.1 NC_015453_p45 hypothetical protein phrog_13647 unknown function unknown function 1 28435 28569
YP_004414720.1 NC_015453_p15 minor tail subunit phrog_106 minor tail protein tail 1 11298 12239
YP_004414732.1 NC_015453_p27 hypothetical protein phrog_1923 unknown function unknown function -1 19263 19457
YP_004414707.1 NC_015453_p2 large terminase phrog_9 terminase large subunit head and packaging 1 378 1889
YP_004414731.1 NC_015453_p26 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 18220 19266
YP_004414714.1 NC_015453_p9 hypothetical protein phrog_387 neck protein connector 1 6450 6740
YP_004414740.1 NC_015453_p35 hypothetical protein phrog_1890 unknown function unknown function -1 23242 23652
YP_004414711.1 NC_015453_p6 major head protein phrog_10 major head protein head and packaging 1 4642 5589
YP_004414730.1 NC_015453_p25 hypothetical protein phrog_1340 unknown function unknown function -1 17892 18212
YP_004414726.1 NC_015453_p21 holin phrog_443 holin lysis 1 16188 16589
YP_004414722.1 NC_015453_p17 hypothetical protein phrog_1910 lectin other 1 13421 14239
YP_004414737.1 NC_015453_p32 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 21475 21831
YP_004414743.1 NC_015453_p38 hypothetical protein phrog_1937 unknown function unknown function -1 25139 25342
YP_004414744.1 NC_015453_p39 hypothetical protein phrog_1884 unknown function unknown function -1 25339 25566
YP_004414719.1 NC_015453_p14 tape measure phrog_58 tail length tape measure protein tail 1 8517 11282
YP_004414749.1 NC_015453_p44 hypothetical protein phrog_8276 unknown function unknown function 1 28150 28305
YP_004414721.1 NC_015453_p16 protease phrog_110 minor tail protein tail 1 12247 13404
YP_004414713.1 NC_015453_p8 hypothetical protein phrog_501 head closure Hc1 connector 1 6096 6443
YP_004414741.1 NC_015453_p36 exonuclease phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 23649 24680
YP_004414742.1 NC_015453_p37 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 24680 25033
YP_004414733.1 NC_015453_p28 hypothetical protein phrog_2548 unknown function unknown function -1 19441 20004
YP_004414708.1 NC_015453_p3 portal protein phrog_104 portal protein head and packaging 1 1886 3211
YP_004414727.1 NC_015453_p22 hypothetical protein phrog_22752 unknown function unknown function 1 16941 17174
YP_004414746.1 NC_015453_p41 hypothetical protein phrog_7707 unknown function unknown function -1 26208 26492
YP_004414747.1 NC_015453_p42 hypothetical protein phrog_919 unknown function unknown function -1 26621 26932
YP_004414725.1 NC_015453_p20 amidase phrog_670 endolysin lysis 1 15318 16175
YP_004414706.1 NC_015453_p1 small terminase phrog_1897 terminase small subunit head and packaging 1 2 373
YP_004414716.1 NC_015453_p11 major tail protein phrog_117 major tail protein tail 1 7161 7799
YP_004414718.1 NC_015453_p13 hypothetical protein phrog_3166 unknown function unknown function 1 8222 8509
YP_004414717.1 NC_015453_p12 hypothetical protein phrog_1927 tail assembly chaperone tail 1 7827 8123
YP_004414735.1 NC_015453_p30 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 20609 21277
YP_004414723.1 NC_015453_p18 hypothetical protein phrog_1958 minor tail protein tail 1 14308 14553
YP_004414745.1 NC_015453_p40 hypothetical protein phrog_1908 unknown function unknown function -1 25591 26124
YP_004414734.1 NC_015453_p29 hypothetical protein phrog_1881 unknown function unknown function -1 20001 20564
YP_004414709.1 NC_015453_p4 hypothetical protein phrog_193 head maturation protease head and packaging 1 3218 3973
YP_004414729.1 NC_015453_p24 hypothetical protein phrog_1947 unknown function unknown function -1 17595 17879
YP_004414748.1 NC_015453_p43 hypothetical protein phrog_25681 unknown function unknown function -1 27008 27274
YP_004414736.1 NC_015453_p31 DNA primase phrog_2304 DNA primase DNA, RNA and nucleotide metabolism -1 21114 21515
YP_004414728.1 NC_015453_p23 sigma factor like phrog_1729 unknown function unknown function -1 17202 17591
YP_004414712.1 NC_015453_p7 hypothetical protein phrog_1290 head-tail adaptor connector 1 5633 6094