Genomic map of Propionibacterium phage PAD20 (NC_015454)

functional categories (each PHROG annotation is associated to a category)             Notes   
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG

More about this genome

Propionibacterium phage PAD20 endogenous virus, complete genome.
Molecule type
Genome structure
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus.
DB of origin
Host Name
Host domain
Is prophage?
Number of proteins
Number of singletons
Number of paralogs

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_004414782.1 NC_015454_p31 DNA primase phrog_2304 DNA primase DNA, RNA and nucleotide metabolism -1 20949 21350
YP_004414790.1 NC_015454_p39 hypothetical protein phrog_1884 unknown function unknown function -1 25091 25318
YP_004414784.1 NC_015454_p33 DNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 21666 22529
YP_004414778.1 NC_015454_p27 hypothetical protein phrog_1923 unknown function unknown function -1 19095 19289
YP_004414796.1 NC_015454_p45 endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 28723 29025
YP_004414795.1 NC_015454_p44 hypothetical protein phrog_13647 unknown function unknown function 1 28492 28626
YP_004414754.1 NC_015454_p3 portal protein phrog_104 portal protein head and packaging 1 1886 3211
YP_004414758.1 NC_015454_p7 hypothetical protein phrog_1290 head-tail adaptor connector 1 5636 6097
YP_004414780.1 NC_015454_p29 hypothetical protein phrog_1881 unknown function unknown function -1 19833 20396
YP_004414792.1 NC_015454_p41 hypothetical protein phrog_919 unknown function unknown function -1 26000 26311
YP_004414781.1 NC_015454_p30 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 20441 21112
YP_004414789.1 NC_015454_p38 hypothetical protein phrog_1937 unknown function unknown function -1 24891 25094
YP_004414771.1 NC_015454_p20 amidase phrog_670 endolysin lysis 1 15389 16252
YP_004414788.1 NC_015454_p37 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 24432 24785
YP_004414763.1 NC_015454_p12 hypothetical protein phrog_1927 tail assembly chaperone tail 1 7821 8114
YP_004414767.1 NC_015454_p16 protease phrog_110 minor tail protein tail 1 12238 13395
YP_004414769.1 NC_015454_p18 hypothetical protein phrog_1958 minor tail protein tail 1 14300 14539
YP_004414793.1 NC_015454_p42 hypothetical protein phrog_25681 unknown function unknown function -1 26387 26653
YP_004414791.1 NC_015454_p40 hypothetical protein phrog_1908 unknown function unknown function -1 25343 25876
YP_004414764.1 NC_015454_p13 hypothetical protein phrog_3166 unknown function unknown function 1 8213 8500
YP_004414779.1 NC_015454_p28 hypothetical protein phrog_2548 unknown function unknown function -1 19273 19836
YP_004414761.1 NC_015454_p10 hypothetical protein phrog_1892 minor tail protein tail 1 6740 7111
YP_004414765.1 NC_015454_p14 tape measure phrog_58 tail length tape measure protein tail 1 8508 11273
YP_004414785.1 NC_015454_p34 hypothetical protein phrog_1288 unknown function unknown function -1 22572 23036
YP_004414755.1 NC_015454_p4 hypothetical protein phrog_193 head maturation protease head and packaging 1 3218 3973
YP_004414768.1 NC_015454_p17 hypothetical protein phrog_1910 lectin other 1 13413 14231
YP_004414760.1 NC_015454_p9 hypothetical protein phrog_387 neck protein connector 1 6453 6743
YP_004414753.1 NC_015454_p2 large terminase phrog_9 terminase large subunit head and packaging 1 378 1889
YP_004414757.1 NC_015454_p6 major head protein phrog_10 major head protein head and packaging 1 4645 5592
YP_004414787.1 NC_015454_p36 exonuclease phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 23503 24432
YP_004414794.1 NC_015454_p43 hypothetical protein phrog_8276 unknown function unknown function 1 28207 28362
YP_004414762.1 NC_015454_p11 major tail protein phrog_117 major tail protein tail 1 7164 7793
YP_004414756.1 NC_015454_p5 scaffold protein phrog_1879 head scaffolding protein head and packaging 1 4084 4638
YP_004414777.1 NC_015454_p26 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 18052 19098
YP_004414773.1 NC_015454_p22 hypothetical protein phrog_22752 unknown function unknown function 1 16676 17005
YP_004414772.1 NC_015454_p21 holin phrog_443 holin lysis 1 16265 16669
YP_004414776.1 NC_015454_p25 hypothetical protein phrog_1340 unknown function unknown function -1 17721 18041
YP_004414766.1 NC_015454_p15 minor tail subunit phrog_106 minor tail protein tail 1 11289 12230
YP_004414752.1 NC_015454_p1 small terminase phrog_1897 terminase small subunit head and packaging 1 2 373
YP_004414759.1 NC_015454_p8 hypothetical protein phrog_501 head closure Hc1 connector 1 6099 6446
YP_004414775.1 NC_015454_p24 hypothetical protein phrog_1947 unknown function unknown function -1 17425 17706
YP_004414783.1 NC_015454_p32 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 21310 21666
YP_004414770.1 NC_015454_p19 tail protein phrog_1806 collagen like minor tail tail 1 14599 15339
YP_004414786.1 NC_015454_p35 hypothetical protein phrog_1890 unknown function unknown function -1 23078 23488
YP_004414774.1 NC_015454_p23 sigma factor like phrog_1729 unknown function unknown function -1 17033 17428