Genomic map of Mycobacterium virus Faith1 (NC_015584)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_015584
Definition
Mycobacterium phage Faith1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bronvirus.
DB of origin
REFSEQ
Length
75960
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
129
%GC
58.91
Number of singletons
1
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_004539060.1 NC_015584_p116 hypothetical protein phrog_3777 unknown function unknown function -1 68573 68974
YP_004539067.1 NC_015584_p123 hypothetical protein phrog_1909 unknown function unknown function -1 71325 72176
YP_004539065.1 NC_015584_p121 hypothetical protein phrog_6968 unknown function unknown function -1 69864 70067
YP_004539032.1 NC_015584_p88 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 56203 57501
YP_004539050.1 NC_015584_p106 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 64487 65176
YP_004538973.1 NC_015584_p29 hypothetical protein phrog_5963 holin lysis 1 27279 27752
YP_004538958.1 NC_015584_p14 tail assembly chaperone phrog_2624 tail assembly chaperone tail 1 9991 10814
YP_004538983.1 NC_015584_p39 hypothetical protein phrog_950 unknown function unknown function -1 32960 33739
YP_004539063.1 NC_015584_p119 hypothetical protein phrog_6004 unknown function unknown function -1 69461 69724
YP_004538978.1 NC_015584_p34 hypothetical protein phrog_9776 unknown function unknown function -1 29108 29395
YP_004539020.1 NC_015584_p76 polynucleotide kinase phrog_505 polynucleotide kinase other 1 51935 52861
YP_004539033.1 NC_015584_p89 hypothetical protein phrog_3641 unknown function unknown function 1 57485 57664
YP_004539030.1 NC_015584_p86 hypothetical protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 55920 56138
YP_004539040.1 NC_015584_p96 hypothetical protein phrog_1042 unknown function unknown function 1 59969 60229
YP_004538964.1 NC_015584_p20 hypothetical protein phrog_2689 minor tail protein tail 1 19225 21024
YP_004539003.1 NC_015584_p59 hypothetical protein phrog_5858 unknown function unknown function 1 43082 43258
YP_004539048.1 NC_015584_p104 hypothetical protein phrog_10206 unknown function unknown function 1 62750 62890
YP_004538969.1 NC_015584_p25 hypothetical protein phrog_9833 unknown function unknown function 1 24257 24406
YP_004539055.1 NC_015584_p111 hypothetical protein phrog_4776 unknown function unknown function -1 66347 67063
YP_004539061.1 NC_015584_p117 hypothetical protein phrog_6224 unknown function unknown function -1 68981 69190
YP_004538974.1 NC_015584_p30 hypothetical protein phrog_5807 unknown function unknown function 1 27752 28006
YP_004538954.1 NC_015584_p10 hypothetical protein phrog_5309 head-tail adaptor connector 1 7692 8030
YP_004538985.1 NC_015584_p41 hypothetical protein phrog_1702 transcriptional repressor transcription regulation 1 34392 34697
YP_004538993.1 NC_015584_p49 hypothetical protein phrog_6017 unknown function unknown function 1 37941 38258
YP_004539022.1 NC_015584_p78 hypothetical protein phrog_7155 unknown function unknown function 1 52976 53218
YP_004539034.1 NC_015584_p90 ClpP-like protease phrog_94 head maturation protease head and packaging 1 57661 58332
YP_004539041.1 NC_015584_p97 hypothetical protein phrog_4472 nucleotide kinase other 1 60204 60620
YP_004539009.1 NC_015584_p65 hypothetical protein phrog_7527 unknown function unknown function 1 45676 45960
YP_004539047.1 NC_015584_p103 hypothetical protein phrog_6800 unknown function unknown function 1 62464 62640
YP_004538966.1 NC_015584_p22 hypothetical protein phrog_4137 unknown function unknown function 1 21190 21465
YP_004539064.1 NC_015584_p120 hypothetical protein phrog_8547 unknown function unknown function -1 69728 69862
YP_004538952.1 NC_015584_p8 major capsid protein phrog_283 major head protein head and packaging 1 6070 7218
YP_004538986.1 NC_015584_p42 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 34694 34909
YP_004539057.1 NC_015584_p113 hypothetical protein phrog_6739 unknown function unknown function -1 67260 67358
YP_004539013.1 NC_015584_p69 hypothetical protein phrog_1882 unknown function unknown function 1 46903 47583
YP_004539027.1 NC_015584_p83 hypothetical protein phrog_1941 unknown function unknown function 1 54609 54839
YP_004539069.1 NC_015584_p125 hypothetical protein phrog_26032 unknown function unknown function -1 73980 74246
YP_004539021.1 NC_015584_p77 hypothetical protein phrog_14542 unknown function unknown function 1 52861 52992
YP_004538949.1 NC_015584_p5 portal phrog_104 portal protein head and packaging 1 2638 4293
YP_004539070.1 NC_015584_p126 hypothetical protein phrog_16092 unknown function unknown function -1 74243 74473
YP_004538960.1 NC_015584_p16 tapemeasure phrog_3547 tail length tape measure protein tail 1 10856 15985
YP_004538998.1 NC_015584_p54 hypothetical protein phrog_2380 unknown function unknown function 1 40165 40404
YP_004539007.1 NC_015584_p63 hypothetical protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 44724 45479
YP_004539044.1 NC_015584_p100 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 61712 62134
YP_004539058.1 NC_015584_p114 hypothetical protein phrog_6230 unknown function unknown function -1 67351 67614
YP_004539042.1 NC_015584_p98 DnaQ-like phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 60617 61399
YP_004538989.1 NC_015584_p45 hypothetical protein phrog_572 unknown function unknown function 1 35347 35772
YP_004538957.1 NC_015584_p13 major tail protein phrog_476 major tail protein tail 1 9002 9901
YP_004539062.1 NC_015584_p118 hypothetical protein phrog_7390 unknown function unknown function -1 69180 69374
YP_004538982.1 NC_015584_p38 tyrosine integrase phrog_1 integrase integration and excision 1 31656 32963
YP_004538975.1 NC_015584_p31 hypothetical protein phrog_726 unknown function unknown function 1 28009 28431
YP_004538968.1 NC_015584_p24 structural protein phrog_9784 minor tail protein tail 1 21937 24225
YP_004538967.1 NC_015584_p23 hypothetical protein phrog_240 head protein head and packaging 1 21550 21936
YP_004538996.1 NC_015584_p52 hypothetical protein phrog_200 lipoprotein other 1 38647 39606
YP_004538977.1 NC_015584_p33 hypothetical protein phrog_6558 unknown function unknown function -1 28758 29102
YP_004539010.1 NC_015584_p66 hypothetical protein phrog_1389 unknown function unknown function 1 45957 46316
YP_004538984.1 NC_015584_p40 hypothetical protein phrog_1746 transcriptional repressor transcription regulation -1 33891 34280
YP_004539052.1 NC_015584_p108 hypothetical protein phrog_10010 unknown function unknown function -1 65690 65836
YP_004538980.1 NC_015584_p36 Lsr2 phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 30213 30674
YP_004539046.1 NC_015584_p102 hypothetical protein phrog_6027 unknown function unknown function 1 62345 62464
YP_004538994.1 NC_015584_p50 hypothetical protein phrog_7316 unknown function unknown function 1 38266 38394
YP_004538959.1 NC_015584_p15 G-like tail assembly chaperone phrog_4464 tail assembly chaperone tail 1 9991 10290
YP_004538981.1 NC_015584_p37 hypothetical protein phrog_10128 unknown function unknown function -1 30751 31119
YP_004538951.1 NC_015584_p7 scaffolding phrog_3760 head scaffolding protein head and packaging 1 5422 6027
YP_004539015.1 NC_015584_p71 hypothetical protein phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 48842 49096
YP_004539025.1 NC_015584_p81 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 53918 54214
YP_004538950.1 NC_015584_p6 hypothetical protein phrog_193 head maturation protease head and packaging 1 4311 5369
YP_004539038.1 NC_015584_p94 hypothetical protein phrog_1969 unknown function unknown function 1 59066 59404
YP_004538976.1 NC_015584_p32 NrdH-like glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 28422 28688
YP_004539001.1 NC_015584_p57 secreted protein phrog_301 secreted protein other 1 42443 42778
YP_004538956.1 NC_015584_p12 hypothetical protein phrog_123 tail terminator connector 1 8471 8974
YP_004538961.1 NC_015584_p17 minor tail subunit phrog_106 minor tail protein tail 1 16074 16988
YP_004538965.1 NC_015584_p21 hypothetical protein phrog_9672 minor tail protein tail 1 21030 21200
YP_004538999.1 NC_015584_p55 hypothetical protein phrog_850 RNA-binding protein DNA, RNA and nucleotide metabolism 1 40520 41950
YP_004538979.1 NC_015584_p35 NrdC-like nucleotidyltransferase phrog_388 nucleotidyltransferase DNA, RNA and nucleotide metabolism -1 29380 30126
YP_004538970.1 NC_015584_p26 hypothetical protein phrog_3856 minor tail protein tail 1 24407 25348
YP_004539019.1 NC_015584_p75 nicotinate phosphoribosyltransferase phrog_448 nicotinamide phosphoribosyl transferase other 1 50364 51848
YP_004538963.1 NC_015584_p19 hypothetical protein phrog_4413 minor tail protein tail 1 18747 19244
YP_004539035.1 NC_015584_p91 hypothetical protein phrog_7495 unknown function unknown function 1 58332 58727
YP_004539043.1 NC_015584_p99 hypothetical protein phrog_397 unknown function unknown function 1 61400 61582
YP_004539017.1 NC_015584_p73 hypothetical protein phrog_6206 unknown function unknown function 1 49373 49519
YP_004539000.1 NC_015584_p56 hypothetical protein phrog_4670 unknown function unknown function 1 42319 42450
YP_004538995.1 NC_015584_p51 hypothetical protein phrog_9674 unknown function unknown function 1 38431 38559
YP_004538955.1 NC_015584_p11 hypothetical protein phrog_5775 head-tail connector protein connector 1 8030 8461
YP_004538992.1 NC_015584_p48 hypothetical protein phrog_9705 unknown function unknown function 1 37619 37954
YP_004539045.1 NC_015584_p101 hypothetical protein phrog_3699 unknown function unknown function 1 62134 62352
YP_004539036.1 NC_015584_p92 hypothetical protein phrog_7890 unknown function unknown function 1 58727 58837
YP_004539037.1 NC_015584_p93 hypothetical protein phrog_2218 unknown function unknown function 1 58834 59073
YP_004539006.1 NC_015584_p62 hypothetical protein phrog_1123 unknown function unknown function 1 44409 44723
YP_004539053.1 NC_015584_p109 hypothetical protein phrog_2124 unknown function unknown function -1 65833 65973
YP_004538962.1 NC_015584_p18 minor tail subunit phrog_110 minor tail protein tail 1 16989 18722
YP_004539071.1 NC_015584_p127 hypothetical protein phrog_14714 unknown function unknown function -1 74485 74649
YP_004539012.1 NC_015584_p68 hypothetical protein phrog_542 unknown function unknown function 1 46673 46906
YP_004538947.1 NC_015584_p3 hypothetical protein phrog_6976 unknown function unknown function 1 866 1069
YP_004538972.1 NC_015584_p28 lysin B phrog_102 endolysin lysis 1 26303 27274
YP_004539024.1 NC_015584_p80 hypothetical protein phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 53557 53970
YP_004539011.1 NC_015584_p67 hypothetical protein singleton unknown function unknown function -1 46324 46599
YP_004539018.1 NC_015584_p74 phosphoribosyl-pyrophosphate synthetase phrog_619 ribose-phosphate pyrophosphokinase other 1 49504 50367
YP_004539051.1 NC_015584_p107 hypothetical protein phrog_6170 unknown function unknown function 1 65183 65539
YP_004539031.1 NC_015584_p87 hypothetical protein phrog_14246 unknown function unknown function 1 56135 56206
YP_004538946.1 NC_015584_p2 terminase small subunit phrog_1496 terminase small subunit head and packaging 1 477 866
YP_004539056.1 NC_015584_p112 hypothetical protein phrog_15796 unknown function unknown function -1 67109 67267
YP_004539068.1 NC_015584_p124 hypothetical protein phrog_249 porphyrin biosynthesis moron, auxiliary metabolic gene and host takeover -1 72386 73624
YP_004539016.1 NC_015584_p72 hypothetical protein phrog_6624 unknown function unknown function 1 49129 49383
YP_004538988.1 NC_015584_p44 hypothetical protein phrog_8707 unknown function unknown function 1 35249 35359
YP_004539023.1 NC_015584_p79 hypothetical protein phrog_6064 unknown function unknown function 1 53215 53400
YP_004539029.1 NC_015584_p85 single-stranded DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 55471 55857
YP_004539008.1 NC_015584_p64 hypothetical protein phrog_5917 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 45479 45679
YP_004539066.1 NC_015584_p122 hypothetical protein phrog_6176 unknown function unknown function 1 70127 70609
YP_004538987.1 NC_015584_p43 hypothetical protein phrog_762 unknown function unknown function 1 34906 35268
YP_004539026.1 NC_015584_p82 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 54215 54619
YP_004539004.1 NC_015584_p60 hypothetical protein phrog_7425 unknown function unknown function 1 43251 43454
YP_004539054.1 NC_015584_p110 hypothetical protein phrog_2869 unknown function unknown function -1 66054 66245
YP_004539005.1 NC_015584_p61 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 43496 44428
YP_004538997.1 NC_015584_p53 hypothetical protein phrog_4870 unknown function unknown function 1 39745 40164
YP_004539014.1 NC_015584_p70 DnaC-like DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 47580 48845
YP_004538971.1 NC_015584_p27 lysin A phrog_1512 endolysin lysis 1 25353 26303
YP_004539073.1 NC_015584_p129 hypothetical protein phrog_15448 unknown function unknown function -1 75186 75311
YP_004539059.1 NC_015584_p115 hypothetical protein phrog_1909 unknown function unknown function -1 67625 68476
YP_004538953.1 NC_015584_p9 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 7231 7695
YP_004538948.1 NC_015584_p4 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1069 2637
YP_004538990.1 NC_015584_p46 hypothetical protein phrog_5916 unknown function unknown function 1 36246 36611
YP_004539049.1 NC_015584_p105 hypothetical protein phrog_30313 unknown function unknown function 1 63673 63804
YP_004539002.1 NC_015584_p58 hypothetical protein phrog_5872 unknown function unknown function 1 42768 43085
YP_004539039.1 NC_015584_p95 HNH-endonuclease like domain phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 59452 59865
YP_004539072.1 NC_015584_p128 hypothetical protein phrog_7398 unknown function unknown function -1 74649 75092
YP_004538991.1 NC_015584_p47 hypothetical protein phrog_1649 metallo-phosphoesterase other 1 36604 37638
YP_004538945.1 NC_015584_p1 hypothetical protein phrog_7082 unknown function unknown function 1 91 468
YP_004539028.1 NC_015584_p84 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 54918 55484