Genomic map of Escherichia phage K30 (NC_015719)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_015719
Definition
Enterobacteria phage K30, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Przondovirus.
DB of origin
REFSEQ
Length
40940
Host Name
Enterobacteriaceae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
49
%GC
51.42
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_004678739.1 NC_015719_p18 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 11079 12809
YP_004678761.1 NC_015719_p40 internal virion protein D phrog_342 internal virion protein with endolysin domain head and packaging 1 28893 32858
YP_004678758.1 NC_015719_p37 internal virion protein A phrog_308 internal virion protein head and packaging 1 25618 26028
YP_004678754.1 NC_015719_p33 hypothetical protein singleton unknown function unknown function 1 21165 21293
YP_004678765.1 NC_015719_p44 DNA packaging protein small subunit phrog_1351 terminase small subunit head and packaging 1 37415 37672
YP_004678738.1 NC_015719_p17 lysozyme phrog_822 amidase lysis 1 10444 10899
YP_004678736.1 NC_015719_p15 single-stranded DNA-binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 9297 9992
YP_004678750.1 NC_015719_p29 hypothetical protein phrog_1391 unknown function unknown function 1 18030 18251
YP_004678731.1 NC_015719_p10 hypothetical protein phrog_6515 dGTPase inhibitor other 1 6790 7056
YP_004678770.1 NC_015719_p49 hypothetical protein singleton unknown function unknown function 1 40504 40620
YP_004678733.1 NC_015719_p12 hypothetical protein phrog_1777 unknown function unknown function 1 8326 8589
YP_004678762.1 NC_015719_p41 tail fiber protein phrog_24786 tail fiber protein tail 1 32920 35631
YP_004678748.1 NC_015719_p27 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 16699 17604
YP_004678768.1 NC_015719_p47 hypothetical protein singleton unknown function unknown function 1 39938 40120
YP_004678759.1 NC_015719_p38 internal virion protein B phrog_805 internal virion protein head and packaging 1 26031 26621
YP_004678725.1 NC_015719_p4 hypothetical protein phrog_2385 unknown function unknown function 1 1613 1810
YP_004678757.1 NC_015719_p36 tail tubular protein B phrog_457 tail protein tail 1 23170 25545
YP_004678741.1 NC_015719_p20 hypothetical protein phrog_1950 unknown function unknown function 1 12908 13117
YP_004678724.1 NC_015719_p3 hypothetical protein phrog_5058 unknown function unknown function 1 1432 1635
YP_004678755.1 NC_015719_p34 major capsid protein phrog_267 major head protein head and packaging 1 21333 22367
YP_004678726.1 NC_015719_p5 hypothetical protein phrog_23914 unknown function unknown function 1 1794 2027
YP_004678764.1 NC_015719_p43 holin phrog_920 holin lysis 1 37208 37411
YP_004678740.1 NC_015719_p19 hypothetical protein phrog_5140 unknown function unknown function 1 12529 12897
YP_004678730.1 NC_015719_p9 hypothetical protein phrog_4383 unknown function unknown function 1 6610 6786
YP_004678745.1 NC_015719_p24 hypothetical protein phrog_1452 Gp5.5-like host HNS inhibition moron, auxiliary metabolic gene and host takeover 1 16037 16339
YP_004678743.1 NC_015719_p22 hypothetical protein phrog_4023 unknown function unknown function 1 13501 13884
YP_004678722.1 NC_015719_p1 hypothetical protein phrog_16783 unknown function unknown function 1 724 888
YP_004678742.1 NC_015719_p21 hypothetical protein phrog_2254 unknown function unknown function 1 13117 13425
YP_004678753.1 NC_015719_p32 capsid assembly protein phrog_1052 head assembly head and packaging 1 20196 21152
YP_004678727.1 NC_015719_p6 protein kinase phrog_2828 serine-threonine kinase other 1 2053 3057
YP_004678766.1 NC_015719_p45 Rz-like lysis protein phrog_1327 Rz-like spanin lysis 1 37769 38215
YP_004678769.1 NC_015719_p48 hypothetical protein phrog_2193 unknown function unknown function 1 40214 40363
YP_004678747.1 NC_015719_p26 hypothetical protein phrog_6234 host RecBCD nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 16542 16706
YP_004678732.1 NC_015719_p11 ATP-dependent DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 7157 8209
YP_004678767.1 NC_015719_p46 DNA packaging protein B phrog_38 terminase large subunit head and packaging 1 38212 39969
YP_004678751.1 NC_015719_p30 tail assembly protein phrog_1320 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 18253 18513
YP_004678744.1 NC_015719_p23 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 13901 16018
YP_004678752.1 NC_015719_p31 head-to-tail joining protein phrog_449 head-tail adaptor connector 1 18525 20132
YP_004678723.1 NC_015719_p2 ocr protein phrog_2568 ocr-like anti-restriction moron, auxiliary metabolic gene and host takeover 1 1110 1460
YP_004678734.1 NC_015719_p13 hypothetical protein phrog_2585 nucleotide kinase other 1 8582 9007
YP_004678763.1 NC_015719_p42 hypothetical protein phrog_18703 tail fiber protein tail 1 35645 37198
YP_004678735.1 NC_015719_p14 bacterial RNA polymerase inhibitor phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 9088 9237
YP_004678728.1 NC_015719_p7 RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 3145 5865
YP_004678729.1 NC_015719_p8 hypothetical protein phrog_6440 unknown function unknown function 1 5964 6524
YP_004678760.1 NC_015719_p39 internal virion protein C phrog_1339 internal virion protein head and packaging 1 26621 28876
YP_004678749.1 NC_015719_p28 hypothetical protein phrog_1447 unknown function unknown function 1 17782 18018
YP_004678746.1 NC_015719_p25 hypothetical protein phrog_1334 unknown function unknown function 1 16336 16545
YP_004678737.1 NC_015719_p16 endonuclease I phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 9992 10441
YP_004678756.1 NC_015719_p35 tail tubular protein A phrog_446 tail protein tail 1 22569 23147