Genomic map of Gordonia phage GTE2 (NC_015720)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_015720
Definition
Gordonia phage GTE2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Emalynvirus; Gordonia virus GTE2.
DB of origin
REFSEQ
Length
45530
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
57
%GC
60.34
Number of singletons
5
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_004678826.1 NC_015720_p56 hypothetical protein phrog_26569 unknown function unknown function 1 44683 45045
YP_004678771.1 NC_015720_p1 hypothetical protein phrog_226 minor tail protein tail 1 59 535
YP_004678827.1 NC_015720_p57 homing endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 45128 45520
YP_004678785.1 NC_015720_p15 tail protein phrog_106 minor tail protein tail 1 14148 15074
YP_004678793.1 NC_015720_p23 tail fiber protein phrog_21962 tail protein tail 1 21320 22207
YP_004678780.1 NC_015720_p10 hypothetical protein phrog_123 tail terminator connector 1 7243 7605
YP_004678802.1 NC_015720_p32 hypothetical protein singleton unknown function unknown function -1 27555 28043
YP_004678803.1 NC_015720_p33 hypothetical protein phrog_1218 exonuclease DNA, RNA and nucleotide metabolism -1 28416 29525
YP_004678820.1 NC_015720_p50 hypothetical protein phrog_19638 unknown function unknown function 1 42721 43014
YP_004678784.1 NC_015720_p14 tape measure protein phrog_4197 tail length tape measure protein tail 1 9463 14106
YP_004678822.1 NC_015720_p52 hypothetical protein phrog_16535 unknown function unknown function 1 43208 43396
YP_004678819.1 NC_015720_p49 hypothetical protein singleton unknown function unknown function 1 42155 42568
YP_004678797.1 NC_015720_p27 hypothetical protein phrog_18656 unknown function unknown function -1 24316 24948
YP_004678775.1 NC_015720_p5 hypothetical protein phrog_1793 head scaffolding protein head and packaging 1 4581 5042
YP_004678814.1 NC_015720_p44 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 36952 38337
YP_004678790.1 NC_015720_p20 hypothetical protein phrog_5552 membrane protein moron, auxiliary metabolic gene and host takeover 1 19052 19540
YP_004678789.1 NC_015720_p19 hypothetical protein phrog_3084 endolysin lysis 1 17772 18722
YP_004678779.1 NC_015720_p9 hypothetical protein phrog_387 neck protein connector 1 6936 7208
YP_004678809.1 NC_015720_p39 hypothetical protein phrog_13667 unknown function unknown function -1 34500 35393
YP_004678810.1 NC_015720_p40 hypothetical protein phrog_1581 unknown function unknown function -1 35417 35662
YP_004678788.1 NC_015720_p18 lysin phrog_1512 endolysin lysis 1 17225 17770
YP_004678794.1 NC_015720_p24 hypothetical protein phrog_356 minor tail protein tail 1 22211 22849
YP_004678824.1 NC_015720_p54 aminotransferase singleton unknown function unknown function -1 43818 44234
YP_004678804.1 NC_015720_p34 hypothetical protein phrog_38093 unknown function unknown function -1 29443 29826
YP_004678821.1 NC_015720_p51 hypothetical protein phrog_26138 unknown function unknown function 1 43011 43208
YP_004678786.1 NC_015720_p16 tail protein phrog_110 minor tail protein tail 1 15173 16768
YP_004678825.1 NC_015720_p55 ankyrin phrog_19800 unknown function unknown function 1 44385 44693
YP_004678772.1 NC_015720_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 803 2482
YP_004678817.1 NC_015720_p47 primase phrog_3123 unknown function unknown function 1 39509 41506
YP_004678795.1 NC_015720_p25 hypothetical protein phrog_5855 unknown function unknown function -1 22928 23569
YP_004678783.1 NC_015720_p13 hypothetical protein singleton unknown function unknown function 1 9054 9317
YP_004678823.1 NC_015720_p53 hypothetical protein phrog_16564 unknown function unknown function 1 43397 43864
YP_004678782.1 NC_015720_p12 hypothetical protein phrog_8595 tail assembly chaperone tail 1 8563 8856
YP_004678811.1 NC_015720_p41 phage-encoded dCTP pyrophosphatase phrog_12184 nucleotide pyrophosphohydrolase other -1 35671 36027
YP_004678773.1 NC_015720_p3 portal protein phrog_104 portal protein head and packaging 1 2503 3933
YP_004678792.1 NC_015720_p22 hypothetical protein phrog_7719 minor tail protein tail 1 19853 20965
YP_004678807.1 NC_015720_p37 cutinase phrog_102 endolysin lysis -1 32658 33497
YP_004678777.1 NC_015720_p7 hypothetical protein phrog_1290 head-tail adaptor connector 1 6096 6605
YP_004678799.1 NC_015720_p29 hypothetical protein phrog_15118 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 26057 26449
YP_004678818.1 NC_015720_p48 hypothetical protein phrog_36245 unknown function unknown function 1 41557 41940
YP_004678805.1 NC_015720_p35 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 29823 32210
YP_004678808.1 NC_015720_p38 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 33637 34503
YP_004678816.1 NC_015720_p46 hypothetical protein phrog_13148 unknown function unknown function -1 39038 39481
YP_004678812.1 NC_015720_p42 guanylate kinase phrog_761 thymidylate kinase other -1 36126 36638
YP_004678787.1 NC_015720_p17 hypothetical protein phrog_8122 minor tail protein tail 1 16788 17177
YP_004678801.1 NC_015720_p31 hypothetical protein phrog_14876 DNA polymerase DNA, RNA and nucleotide metabolism -1 27012 27554
YP_004678791.1 NC_015720_p21 hypothetical protein phrog_20118 unknown function unknown function 1 19545 19853
YP_004678800.1 NC_015720_p30 VRR-NUC domain containing protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 26597 26884
YP_004678776.1 NC_015720_p6 main capsid protein phrog_10 major head protein head and packaging 1 5063 6028
YP_004678815.1 NC_015720_p45 hypothetical protein singleton unknown function unknown function -1 38633 38986
YP_004678806.1 NC_015720_p36 deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 32207 32665
YP_004678798.1 NC_015720_p28 hypothetical protein phrog_16498 unknown function unknown function -1 25481 25921
YP_004678813.1 NC_015720_p43 hypothetical protein phrog_23484 unknown function unknown function -1 36635 36955
YP_004678796.1 NC_015720_p26 hypothetical protein phrog_1006 unknown function unknown function -1 23512 24090
YP_004678781.1 NC_015720_p11 main tail protein phrog_117 major tail protein tail 1 7614 8459
YP_004678774.1 NC_015720_p4 hypothetical protein phrog_193 head maturation protease head and packaging 1 3827 4531
YP_004678778.1 NC_015720_p8 hypothetical protein phrog_763 head-tail adaptor connector 1 6602 6943