Genomic map of Thermus phage TMA (NC_015937)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_015937
Definition
Thermus phage TMA, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
DB of origin
REFSEQ
Length
151483
Host Name
Thermus thermophilus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
168
%GC
32.62
Number of singletons
9
Number of paralogs
9

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_004782375.1 NC_015937_p168 hypothetical protein phrog_34344 unknown function unknown function 1 151005 151268
YP_004782348.1 NC_015937_p141 hypothetical protein phrog_38410 unknown function unknown function -1 123126 123650
YP_004782260.1 NC_015937_p53 hypothetical protein phrog_33571 unknown function unknown function 1 43639 44124
YP_004782254.1 NC_015937_p47 hypothetical protein phrog_36392 unknown function unknown function 1 39607 39915
YP_004782222.1 NC_015937_p15 hypothetical protein phrog_28453 unknown function unknown function -1 14644 14937
YP_004782349.1 NC_015937_p142 M27/M37 peptidase phrog_14988 peptidase other -1 123665 124705
YP_004782242.1 NC_015937_p35 hypothetical protein phrog_28916 unknown function unknown function -1 32651 32917
YP_004782330.1 NC_015937_p123 hypothetical protein phrog_20373 unknown function unknown function -1 108315 108812
YP_004782278.1 NC_015937_p71 hypothetical protein phrog_38820 unknown function unknown function -1 60965 61480
YP_004782284.1 NC_015937_p77 hypothetical protein phrog_35380 unknown function unknown function -1 74777 75160
YP_004782311.1 NC_015937_p104 hypothetical protein phrog_17563 unknown function unknown function -1 95056 95562
YP_004782324.1 NC_015937_p117 hypothetical protein phrog_25253 unknown function unknown function -1 104774 105223
YP_004782263.1 NC_015937_p56 SpoVR phrog_35658 unknown function unknown function 1 45897 47234
YP_004782296.1 NC_015937_p89 hypothetical protein singleton unknown function unknown function -1 88417 88782
YP_004782220.1 NC_015937_p13 recombination protein ERF phrog_30552 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 12693 13268
YP_004782318.1 NC_015937_p111 glycosyltransferase phrog_17351 glycosyltransferase moron, auxiliary metabolic gene and host takeover -1 101301 101792
YP_004782247.1 NC_015937_p40 ribonucleotide reductase alpha subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 34931 37324
YP_004782282.1 NC_015937_p75 hypothetical protein phrog_28821 unknown function unknown function -1 64883 69460
YP_004782287.1 NC_015937_p80 hypothetical protein phrog_21121 unknown function unknown function -1 80663 82615
YP_004782327.1 NC_015937_p120 hypothetical protein phrog_21922 unknown function unknown function -1 106456 106974
YP_004782323.1 NC_015937_p116 hypothetical protein phrog_33272 unknown function unknown function -1 104194 104760
YP_004782223.1 NC_015937_p16 hypothetical protein phrog_28522 unknown function unknown function 1 15026 15355
YP_004782279.1 NC_015937_p72 major structural protein phrog_752 major head protein head and packaging -1 61554 62966
YP_004782265.1 NC_015937_p58 serine kinase phrog_22605 unknown function unknown function 1 49151 51010
YP_004782256.1 NC_015937_p49 hypothetical protein phrog_31532 unknown function unknown function 1 40288 40743
YP_004782244.1 NC_015937_p37 hypothetical protein phrog_28325 unknown function unknown function 1 33556 33921
YP_004782369.1 NC_015937_p162 hypothetical protein phrog_38170 unknown function unknown function 1 146206 146751
YP_004782216.1 NC_015937_p9 flavin-dependent thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 9865 10692
YP_004782252.1 NC_015937_p45 hypothetical protein phrog_37675 unknown function unknown function 1 38954 39169
YP_004782326.1 NC_015937_p119 hypothetical protein phrog_32777 unknown function unknown function -1 105825 106328
YP_004782317.1 NC_015937_p110 hypothetical protein phrog_17351 glycosyltransferase moron, auxiliary metabolic gene and host takeover -1 100768 101301
YP_004782341.1 NC_015937_p134 hypothetical protein phrog_36670 unknown function unknown function -1 115382 115804
YP_004782370.1 NC_015937_p163 hypothetical protein phrog_31677 unknown function unknown function 1 146789 147418
YP_004782309.1 NC_015937_p102 hypothetical protein singleton unknown function unknown function -1 94420 94605
YP_004782371.1 NC_015937_p164 hypothetical protein phrog_31130 unknown function unknown function 1 147412 147801
YP_004782280.1 NC_015937_p73 prohead protease phrog_32465 head maturation protease head and packaging -1 63002 64636
YP_004782313.1 NC_015937_p106 ATPase phrog_1297 ATPase other -1 97507 98550
YP_004782347.1 NC_015937_p140 hypothetical protein phrog_29223 unknown function unknown function -1 120067 123111
YP_004782245.1 NC_015937_p38 deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 33905 34333
YP_004782243.1 NC_015937_p36 hypothetical protein phrog_36560 unknown function unknown function -1 32914 33192
YP_004782310.1 NC_015937_p103 hypothetical protein singleton unknown function unknown function -1 94637 94924
YP_004782298.1 NC_015937_p91 hypothetical protein phrog_24400 unknown function unknown function -1 89289 89711
YP_004782292.1 NC_015937_p85 hypothetical protein phrog_33017 unknown function unknown function -1 86141 86392
YP_004782302.1 NC_015937_p95 hypothetical protein phrog_35511 unknown function unknown function -1 91303 91845
YP_004782264.1 NC_015937_p57 hypothetical protein phrog_31767 unknown function unknown function 1 47262 49112
YP_004782288.1 NC_015937_p81 hypothetical protein phrog_21121 unknown function unknown function -1 82646 84526
YP_004782248.1 NC_015937_p41 ribonucleotide reductase alpha subunit phrog_23565 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 37337 37936
YP_004782240.1 NC_015937_p33 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 30270 32381
YP_004782339.1 NC_015937_p132 resolvase-like protein phrog_6620 transposase integration and excision -1 114112 114672
YP_004782211.1 NC_015937_p4 hypothetical protein phrog_33186 unknown function unknown function -1 7322 7978
YP_004782353.1 NC_015937_p146 hypothetical protein phrog_35766 unknown function unknown function 1 126177 126572
YP_004782217.1 NC_015937_p10 hypothetical protein phrog_28072 unknown function unknown function -1 10726 11241
YP_004782251.1 NC_015937_p44 hypothetical protein phrog_35802 unknown function unknown function 1 38628 38957
YP_004782321.1 NC_015937_p114 hypothetical protein phrog_38554 unknown function unknown function -1 103106 103663
YP_004782352.1 NC_015937_p145 hypothetical protein phrog_29162 unknown function unknown function 1 125982 126167
YP_004782291.1 NC_015937_p84 hypothetical protein phrog_28716 unknown function unknown function -1 85888 86040
YP_004782250.1 NC_015937_p43 hypothetical protein phrog_34965 unknown function unknown function 1 38189 38641
YP_004782231.1 NC_015937_p24 thymidine kinase phrog_592 thymidine kinase other -1 21565 22173
YP_004782238.1 NC_015937_p31 hypothetical protein phrog_29169 unknown function unknown function -1 28986 29678
YP_004782364.1 NC_015937_p157 hypothetical protein phrog_28485 unknown function unknown function 1 142434 142958
YP_004782286.1 NC_015937_p79 hypothetical protein phrog_38288 unknown function unknown function -1 79755 80618
YP_004782316.1 NC_015937_p109 hypothetical protein phrog_37167 unknown function unknown function -1 100375 100767
YP_004782305.1 NC_015937_p98 hypothetical protein phrog_17563 unknown function unknown function -1 93018 93533
YP_004782285.1 NC_015937_p78 helicase phrog_37249 helicase DNA, RNA and nucleotide metabolism -1 75181 79758
YP_004782342.1 NC_015937_p135 hypothetical protein phrog_36633 unknown function unknown function 1 115926 116585
YP_004782229.1 NC_015937_p22 hypothetical protein phrog_28635 unknown function unknown function -1 19083 19856
YP_004782297.1 NC_015937_p90 hypothetical protein singleton unknown function unknown function -1 88993 89223
YP_004782219.1 NC_015937_p12 RecA/RadA recombinase phrog_97 UvsX-like recombinase other -1 11686 12696
YP_004782213.1 NC_015937_p6 hypothetical protein phrog_31483 unknown function unknown function -1 8474 8698
YP_004782259.1 NC_015937_p52 hypothetical protein phrog_37780 unknown function unknown function 1 43110 43637
YP_004782337.1 NC_015937_p130 hypothetical protein phrog_32010 unknown function unknown function -1 112315 112659
YP_004782267.1 NC_015937_p60 hypothetical protein phrog_38289 unknown function unknown function 1 51773 52222
YP_004782289.1 NC_015937_p82 hypothetical protein phrog_21991 unknown function unknown function -1 84962 85204
YP_004782319.1 NC_015937_p112 hypothetical protein phrog_36343 unknown function unknown function -1 102136 102378
YP_004782361.1 NC_015937_p154 hypothetical protein phrog_32951 unknown function unknown function 1 136746 137609
YP_004782332.1 NC_015937_p125 hypothetical protein phrog_20408 unknown function unknown function -1 109323 109835
YP_004782275.1 NC_015937_p68 tail sheath protein phrog_279 tail sheath tail -1 57573 59519
YP_004782221.1 NC_015937_p14 DNA helicase DnaB phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 13314 14657
YP_004782329.1 NC_015937_p122 hypothetical protein phrog_20408 unknown function unknown function -1 107719 108303
YP_004782234.1 NC_015937_p27 DEAD domain helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 23794 25143
YP_004782306.1 NC_015937_p99 hypothetical protein singleton unknown function unknown function -1 93603 93737
YP_004782293.1 NC_015937_p86 hypothetical protein phrog_19431 unknown function unknown function -1 86494 86742
YP_004782360.1 NC_015937_p153 hypothetical protein phrog_29526 unknown function unknown function 1 136406 136756
YP_004782209.1 NC_015937_p2 hypothetical protein phrog_32823 unknown function unknown function -1 1851 4496
YP_004782312.1 NC_015937_p105 hypothetical protein phrog_32906 unknown function unknown function -1 95781 97490
YP_004782350.1 NC_015937_p143 hypothetical protein phrog_38346 unknown function unknown function -1 124710 125660
YP_004782308.1 NC_015937_p101 hypothetical protein singleton unknown function unknown function -1 94067 94399
YP_004782363.1 NC_015937_p156 hypothetical protein phrog_30968 unknown function unknown function 1 138365 142408
YP_004782262.1 NC_015937_p55 conserved bacterial protein phrog_19072 unknown function unknown function 1 44885 45907
YP_004782303.1 NC_015937_p96 hypothetical protein phrog_20841 unknown function unknown function -1 91845 92381
YP_004782266.1 NC_015937_p59 dNMP kinase phrog_139 deoxynucleoside monophosphate kinase other 1 51148 51735
YP_004782365.1 NC_015937_p158 hypothetical protein phrog_32538 unknown function unknown function 1 143267 143479
YP_004782340.1 NC_015937_p133 hypothetical protein phrog_33978 unknown function unknown function -1 114838 115410
YP_004782344.1 NC_015937_p137 hypothetical protein phrog_29804 unknown function unknown function -1 117507 119111
YP_004782295.1 NC_015937_p88 hypothetical protein phrog_31893 unknown function unknown function -1 87803 88288
YP_004782334.1 NC_015937_p127 hypothetical protein phrog_28334 unknown function unknown function -1 110360 110788
YP_004782307.1 NC_015937_p100 hypothetical protein singleton unknown function unknown function -1 93867 94016
YP_004782233.1 NC_015937_p26 RecB family exonuclease phrog_1706 CRISPR/Cas system associated DNA, RNA and nucleotide metabolism -1 22871 23797
YP_004782338.1 NC_015937_p131 transposase phrog_12300 transposase integration and excision -1 112650 114119
YP_004782294.1 NC_015937_p87 hypothetical protein singleton unknown function unknown function -1 86952 87713
YP_004782357.1 NC_015937_p150 wac fibritin neck whisker phrog_36448 unknown function unknown function 1 130982 133372
YP_004782368.1 NC_015937_p161 hypothetical protein phrog_31341 unknown function unknown function -1 145502 146134
YP_004782336.1 NC_015937_p129 hypothetical protein phrog_36948 unknown function unknown function -1 111543 112190
YP_004782276.1 NC_015937_p69 hypothetical protein phrog_37615 unknown function unknown function -1 59580 60290
YP_004782345.1 NC_015937_p138 hypothetical protein phrog_38459 unknown function unknown function -1 119340 119891
YP_004782258.1 NC_015937_p51 UDP-3-O-[3-hydroxy-myristory] glucosamine N-acyltransferase phrog_36281 unknown function unknown function 1 42235 43107
YP_004782346.1 NC_015937_p139 hypothetical protein phrog_30278 unknown function unknown function 1 119935 120108
YP_004782331.1 NC_015937_p124 hypothetical protein phrog_35078 unknown function unknown function -1 108821 109291
YP_004782358.1 NC_015937_p151 hypothetical protein phrog_37714 unknown function unknown function 1 133365 135476
YP_004782227.1 NC_015937_p20 hypothetical protein phrog_31151 unknown function unknown function -1 18296 18733
YP_004782356.1 NC_015937_p149 hypothetical protein phrog_30797 unknown function unknown function 1 129076 130971
YP_004782373.1 NC_015937_p166 hypothetical protein phrog_32268 unknown function unknown function 1 149367 150452
YP_004782304.1 NC_015937_p97 hypothetical protein phrog_35976 unknown function unknown function -1 92393 92878
YP_004782374.1 NC_015937_p167 hypothetical protein phrog_38083 unknown function unknown function 1 150449 151018
YP_004782359.1 NC_015937_p152 hypothetical protein phrog_30748 unknown function unknown function 1 135500 136399
YP_004782261.1 NC_015937_p54 peptidoglycan-binding domain containing protein phrog_30036 unknown function unknown function -1 44121 44825
YP_004782257.1 NC_015937_p50 hypothetical protein phrog_34971 unknown function unknown function 1 40740 42200
YP_004782367.1 NC_015937_p160 hypothetical protein phrog_28854 unknown function unknown function -1 144533 145486
YP_004782246.1 NC_015937_p39 hypothetical protein phrog_30525 unknown function unknown function 1 34361 34885
YP_004782226.1 NC_015937_p19 hypothetical protein phrog_36136 unknown function unknown function -1 17004 18239
YP_004782270.1 NC_015937_p63 hypothetical protein phrog_28244 unknown function unknown function -1 54843 55223
YP_004782333.1 NC_015937_p126 hypothetical protein phrog_20373 unknown function unknown function -1 109847 110353
YP_004782212.1 NC_015937_p5 S-adenosylmethionine decarboxylase phrog_3125 S-adenosylmethionine decarboxylase other -1 8006 8440
YP_004782274.1 NC_015937_p67 hypothetical protein phrog_20157 unknown function unknown function -1 56902 57552
YP_004782235.1 NC_015937_p28 hypothetical protein phrog_32400 unknown function unknown function 1 25292 26692
YP_004782236.1 NC_015937_p29 sugar-phospahte nucleotidyltransferase phrog_799 DNA methyltransferase other 1 26718 27227
YP_004782239.1 NC_015937_p32 hypothetical protein phrog_34750 unknown function unknown function -1 29695 30174
YP_004782366.1 NC_015937_p159 radical SAM superfamily enzyme phrog_16999 Fe-S oxidoreductase other -1 143469 144536
YP_004782322.1 NC_015937_p115 hypothetical protein phrog_34367 unknown function unknown function -1 103653 104204
YP_004782230.1 NC_015937_p23 DNA primase bacterial DnaG type phrog_6444 DNA primase DNA, RNA and nucleotide metabolism -1 19840 21516
YP_004782372.1 NC_015937_p165 hypothetical protein phrog_32455 unknown function unknown function 1 147847 149340
YP_004782228.1 NC_015937_p21 hypothetical protein phrog_28994 unknown function unknown function -1 18730 19110
YP_004782354.1 NC_015937_p147 hypothetical protein phrog_28393 unknown function unknown function 1 126583 127071
YP_004782355.1 NC_015937_p148 baseplate assembly protein phrog_31189 baseplate protein tail 1 127091 129079
YP_004782290.1 NC_015937_p83 hypothetical protein phrog_21991 unknown function unknown function -1 85452 85655
YP_004782210.1 NC_015937_p3 portal protein phrog_37955 portal protein head and packaging -1 4483 7320
YP_004782328.1 NC_015937_p121 hypothetical protein phrog_29459 unknown function unknown function -1 107159 107671
YP_004782335.1 NC_015937_p128 hypothetical protein phrog_33335 unknown function unknown function 1 111010 111546
YP_004782225.1 NC_015937_p18 DNA binding HTH-domain protein phrog_31591 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 16536 16946
YP_004782343.1 NC_015937_p136 hypothetical protein phrog_32403 unknown function unknown function -1 116553 117116
YP_004782255.1 NC_015937_p48 hypothetical protein phrog_35010 unknown function unknown function 1 39931 40278
YP_004782277.1 NC_015937_p70 hypothetical protein phrog_36790 unknown function unknown function -1 60293 60955
YP_004782237.1 NC_015937_p30 hypothetical protein phrog_37493 unknown function unknown function -1 27224 28981
YP_004782314.1 NC_015937_p107 hypothetical protein phrog_37975 unknown function unknown function -1 98681 99376
YP_004782283.1 NC_015937_p76 hypothetical protein phrog_34055 unknown function unknown function -1 69482 74764
YP_004782301.1 NC_015937_p94 hypothetical protein phrog_29441 unknown function unknown function -1 90644 91189
YP_004782271.1 NC_015937_p64 hypothetical protein phrog_32695 unknown function unknown function -1 55204 55812
YP_004782224.1 NC_015937_p17 IMP dehydrogenase/GMP reductase phrog_9582 dehydrogenase other 1 15369 16478
YP_004782315.1 NC_015937_p108 hypothetical protein phrog_34311 unknown function unknown function -1 99446 100192
YP_004782249.1 NC_015937_p42 hypothetical protein phrog_32264 unknown function unknown function 1 37970 38176
YP_004782325.1 NC_015937_p118 hypothetical protein phrog_21922 unknown function unknown function -1 105236 105730
YP_004782273.1 NC_015937_p66 hypothetical protein phrog_20157 unknown function unknown function -1 56160 56900
YP_004782299.1 NC_015937_p92 hypothetical protein phrog_19431 unknown function unknown function -1 90132 90308
YP_004782281.1 NC_015937_p74 hypothetical protein phrog_28197 unknown function unknown function -1 64636 64896
YP_004782351.1 NC_015937_p144 hypothetical protein phrog_32092 unknown function unknown function -1 125665 125925
YP_004782362.1 NC_015937_p155 hypothetical protein phrog_30706 unknown function unknown function 1 137581 138381
YP_004782320.1 NC_015937_p113 hypothetical protein phrog_30737 unknown function unknown function -1 102487 102963
YP_004782214.1 NC_015937_p7 hypothetical protein phrog_33568 unknown function unknown function -1 8711 9322
YP_004782208.1 NC_015937_p1 distal tail fiber protein phrog_33119 long tail fiber protein distal subunit tail -1 7 1848
YP_004782253.1 NC_015937_p46 hypothetical protein phrog_29488 unknown function unknown function 1 39171 39614
YP_004782241.1 NC_015937_p34 hypothetical protein phrog_33779 unknown function unknown function -1 32374 32664
YP_004782272.1 NC_015937_p65 hypothetical protein phrog_31812 unknown function unknown function 1 55844 56110
YP_004782300.1 NC_015937_p93 hypothetical protein singleton unknown function unknown function -1 90334 90516
YP_004782232.1 NC_015937_p25 ClpP protease phrog_94 head maturation protease head and packaging -1 22198 22905
YP_004782215.1 NC_015937_p8 dUTPase phrog_135 dUTPase DNA, RNA and nucleotide metabolism -1 9309 9851
YP_004782269.1 NC_015937_p62 hypothetical protein phrog_33520 unknown function unknown function -1 54058 54846
YP_004782268.1 NC_015937_p61 terminase large subunit phrog_2 terminase large subunit head and packaging -1 52215 54074
YP_004782218.1 NC_015937_p11 hypothetical protein phrog_28760 unknown function unknown function -1 11220 11693