| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_015938 |
Definition |
Salmonella phage 7-11, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae. |
DB of origin |
REFSEQ |
Length |
89916 |
Host Name |
Salmonella enterica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
151 |
%GC |
44.12 |
Number of singletons |
22 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_004782466.1 | NC_015938_p91 | hypothetical protein | phrog_33966 | unknown function | unknown function | -1 | 57395 | 57598 |
| YP_004782399.1 | NC_015938_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24208 | 26160 |
| YP_004782405.1 | NC_015938_p30 | hypothetical protein | phrog_8821 | Rz-like spanin | lysis | 1 | 29887 | 30306 |
| YP_004782511.1 | NC_015938_p136 | hypothetical protein | singleton | unknown function | unknown function | -1 | 83011 | 83226 |
| YP_004782428.1 | NC_015938_p53 | hypothetical protein | phrog_11811 | unknown function | unknown function | -1 | 40520 | 40732 |
| YP_004782460.1 | NC_015938_p85 | hypothetical protein | phrog_27921 | unknown function | unknown function | -1 | 54973 | 55476 |
| YP_004782472.1 | NC_015938_p97 | hypothetical protein | phrog_3715 | unknown function | unknown function | -1 | 59787 | 60014 |
| YP_004782401.1 | NC_015938_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26397 | 27863 |
| YP_004782415.1 | NC_015938_p40 | hypothetical protein | phrog_3986 | unknown function | unknown function | -1 | 33371 | 33811 |
| YP_004782430.1 | NC_015938_p55 | hypothetical protein | phrog_5116 | unknown function | unknown function | -1 | 41112 | 41324 |
| YP_004782388.1 | NC_015938_p13 | hypothetical protein | phrog_24774 | unknown function | unknown function | 1 | 12550 | 13326 |
| YP_004782518.1 | NC_015938_p143 | hypothetical protein | phrog_31994 | unknown function | unknown function | -1 | 85288 | 85689 |
| YP_004782523.1 | NC_015938_p148 | hypothetical protein | phrog_33783 | unknown function | unknown function | -1 | 87314 | 87523 |
| YP_004782505.1 | NC_015938_p130 | hypothetical protein | phrog_22555 | unknown function | unknown function | -1 | 80629 | 80943 |
| YP_004782449.1 | NC_015938_p74 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 48830 | 49510 |
| YP_004782426.1 | NC_015938_p51 | serine/threonine phosphatase | phrog_547 | phosphoesterase | other | -1 | 39335 | 39880 |
| YP_004782444.1 | NC_015938_p69 | hypothetical protein | phrog_1312 | unknown function | unknown function | -1 | 47177 | 47344 |
| YP_004782525.1 | NC_015938_p150 | hypothetical protein | singleton | unknown function | unknown function | -1 | 87947 | 88117 |
| YP_004782499.1 | NC_015938_p124 | hypothetical protein | singleton | unknown function | unknown function | -1 | 77895 | 78035 |
| YP_004782437.1 | NC_015938_p62 | hypothetical protein | singleton | unknown function | unknown function | -1 | 43523 | 43636 |
| YP_004782468.1 | NC_015938_p93 | hypothetical protein | singleton | unknown function | unknown function | -1 | 57816 | 57998 |
| YP_004782457.1 | NC_015938_p82 | DNA polymerase | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | -1 | 52210 | 52716 |
| YP_004782477.1 | NC_015938_p102 | glutamine amidotransferase | phrog_4736 | L-glutamine-D-fructose-6-phosphate aminotransferase | other | -1 | 62089 | 64038 |
| YP_004782400.1 | NC_015938_p25 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26227 | 26352 |
| YP_004782475.1 | NC_015938_p100 | hypothetical protein | phrog_36016 | unknown function | unknown function | -1 | 61598 | 61849 |
| YP_004782473.1 | NC_015938_p98 | hypothetical protein | phrog_24116 | unknown function | unknown function | -1 | 60014 | 60271 |
| YP_004782504.1 | NC_015938_p129 | anti-sigma factor Srd | phrog_4592 | decoy of host sigma70 | moron, auxiliary metabolic gene and host takeover | -1 | 80136 | 80654 |
| YP_004782429.1 | NC_015938_p54 | hypothetical protein | phrog_38254 | unknown function | unknown function | -1 | 40742 | 40942 |
| YP_004782494.1 | NC_015938_p119 | nicotinamide phosphoribosyl transferase | phrog_448 | nicotinamide phosphoribosyl transferase | other | -1 | 72634 | 74304 |
| YP_004782443.1 | NC_015938_p68 | hypothetical protein | phrog_4590 | unknown function | unknown function | -1 | 46821 | 47162 |
| YP_004782450.1 | NC_015938_p75 | hypothetical protein | phrog_13236 | unknown function | unknown function | -1 | 49514 | 49723 |
| YP_004782389.1 | NC_015938_p14 | hypothetical protein | phrog_2871 | tail protein | tail | 1 | 13292 | 16222 |
| YP_004782407.1 | NC_015938_p32 | hypothetical protein | phrog_887 | queuine tRNA-ribosyltransferase | moron, auxiliary metabolic gene and host takeover | -1 | 30787 | 31491 |
| YP_004782416.1 | NC_015938_p41 | hypothetical protein | phrog_29294 | unknown function | unknown function | -1 | 33826 | 34065 |
| YP_004782478.1 | NC_015938_p103 | hypothetical protein | phrog_38711 | unknown function | unknown function | -1 | 64106 | 65809 |
| YP_004782491.1 | NC_015938_p116 | hypothetical protein | phrog_323 | transcriptional regulator, D5-like | transcription regulation | -1 | 71965 | 72279 |
| YP_004782522.1 | NC_015938_p147 | hypothetical protein | phrog_23050 | unknown function | unknown function | -1 | 86613 | 87311 |
| YP_004782498.1 | NC_015938_p123 | hypothetical protein | phrog_200 | lipoprotein | other | -1 | 77117 | 77743 |
| YP_004782502.1 | NC_015938_p127 | hypothetical protein | phrog_32310 | unknown function | unknown function | -1 | 79591 | 79809 |
| YP_004782433.1 | NC_015938_p58 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42741 | 42923 |
| YP_004782438.1 | NC_015938_p63 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 43646 | 45481 |
| YP_004782520.1 | NC_015938_p145 | hypothetical protein | singleton | unknown function | unknown function | -1 | 86057 | 86419 |
| YP_004782496.1 | NC_015938_p121 | hypothetical protein | phrog_1491 | tail fiber protein | tail | -1 | 75537 | 76178 |
| YP_004782410.1 | NC_015938_p35 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32178 | 32318 |
| YP_004782380.1 | NC_015938_p5 | portal protein | phrog_1216 | portal protein | head and packaging | 1 | 4721 | 7072 |
| YP_004782395.1 | NC_015938_p20 | DNA injection protein | phrog_4287 | DNA ejection protein | DNA, RNA and nucleotide metabolism | 1 | 19835 | 21073 |
| YP_004782506.1 | NC_015938_p131 | hypothetical protein | phrog_29867 | unknown function | unknown function | -1 | 81180 | 81422 |
| YP_004782409.1 | NC_015938_p34 | hypothetical protein | phrog_32535 | unknown function | unknown function | -1 | 32006 | 32173 |
| YP_004782481.1 | NC_015938_p106 | hypothetical protein | phrog_19161 | unknown function | unknown function | -1 | 67216 | 68289 |
| YP_004782488.1 | NC_015938_p113 | hypothetical protein | phrog_944 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 71117 | 71569 |
| YP_004782485.1 | NC_015938_p110 | hypothetical protein | phrog_34634 | unknown function | unknown function | -1 | 69959 | 70216 |
| YP_004782487.1 | NC_015938_p112 | hypothetical protein | phrog_34455 | unknown function | unknown function | -1 | 70893 | 71120 |
| YP_004782417.1 | NC_015938_p42 | hypothetical protein | phrog_38244 | unknown function | unknown function | -1 | 34058 | 34429 |
| YP_004782524.1 | NC_015938_p149 | hypothetical protein | phrog_29052 | unknown function | unknown function | -1 | 87516 | 87878 |
| YP_004782398.1 | NC_015938_p23 | hypothetical protein | phrog_35431 | unknown function | unknown function | 1 | 22559 | 24196 |
| YP_004782408.1 | NC_015938_p33 | hypothetical protein | phrog_236 | nucleotide kinase | other | -1 | 31734 | 32009 |
| YP_004782412.1 | NC_015938_p37 | GTP-binding protein | phrog_289 | GTP-binding domain | other | -1 | 32621 | 32971 |
| YP_004782421.1 | NC_015938_p46 | hypothetical protein | phrog_26830 | unknown function | unknown function | -1 | 36866 | 37051 |
| YP_004782447.1 | NC_015938_p72 | hypothetical protein | phrog_36488 | unknown function | unknown function | -1 | 48082 | 48381 |
| YP_004782452.1 | NC_015938_p77 | hypothetical protein | phrog_25175 | unknown function | unknown function | -1 | 49894 | 50127 |
| YP_004782385.1 | NC_015938_p10 | hypothetical protein | phrog_20917 | unknown function | unknown function | 1 | 11314 | 11598 |
| YP_004782394.1 | NC_015938_p19 | hypothetical protein | phrog_28154 | unknown function | unknown function | 1 | 19599 | 19823 |
| YP_004782510.1 | NC_015938_p135 | hypothetical protein | phrog_35232 | unknown function | unknown function | -1 | 82845 | 83024 |
| YP_004782404.1 | NC_015938_p29 | endonuclease | phrog_945 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29462 | 29890 |
| YP_004782448.1 | NC_015938_p73 | DNA-binding protein | phrog_3636 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 48390 | 48830 |
| YP_004782459.1 | NC_015938_p84 | primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | -1 | 53123 | 54925 |
| YP_004782517.1 | NC_015938_p142 | hypothetical protein | singleton | unknown function | unknown function | -1 | 84945 | 85322 |
| YP_004782451.1 | NC_015938_p76 | hypothetical protein | phrog_34669 | unknown function | unknown function | -1 | 49720 | 49890 |
| YP_004782493.1 | NC_015938_p118 | hypothetical protein | phrog_27965 | unknown function | unknown function | -1 | 72416 | 72637 |
| YP_004782393.1 | NC_015938_p18 | hypothetical protein | phrog_3287 | virion structural protein | head and packaging | 1 | 17884 | 19599 |
| YP_004782423.1 | NC_015938_p48 | hypothetical protein | phrog_6599 | unknown function | unknown function | -1 | 37708 | 38481 |
| YP_004782513.1 | NC_015938_p138 | hypothetical protein | phrog_36449 | unknown function | unknown function | -1 | 83463 | 83744 |
| YP_004782467.1 | NC_015938_p92 | hypothetical protein | phrog_13365 | unknown function | unknown function | -1 | 57599 | 57808 |
| YP_004782396.1 | NC_015938_p21 | hypothetical protein | phrog_27929 | unknown function | unknown function | 1 | 21104 | 22003 |
| YP_004782458.1 | NC_015938_p83 | endonuclease | phrog_2633 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 52726 | 53142 |
| YP_004782512.1 | NC_015938_p137 | hypothetical protein | singleton | unknown function | unknown function | -1 | 83144 | 83593 |
| YP_004782526.1 | NC_015938_p151 | hypothetical protein | phrog_34693 | unknown function | unknown function | -1 | 88246 | 88863 |
| YP_004782465.1 | NC_015938_p90 | hypothetical protein | phrog_6894 | unknown function | unknown function | -1 | 57074 | 57394 |
| YP_004782378.1 | NC_015938_p3 | hypothetical protein | phrog_33425 | unknown function | unknown function | 1 | 2908 | 3066 |
| YP_004782420.1 | NC_015938_p45 | 5'-3' exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 35958 | 36869 |
| YP_004782386.1 | NC_015938_p11 | hypothetical protein | phrog_402 | unknown function | unknown function | 1 | 11612 | 11803 |
| YP_004782521.1 | NC_015938_p146 | hypothetical protein | phrog_30165 | unknown function | unknown function | -1 | 86422 | 86610 |
| YP_004782461.1 | NC_015938_p86 | hypothetical protein | phrog_2520 | gamma-glutamyl cyclotransferase | moron, auxiliary metabolic gene and host takeover | -1 | 55497 | 56159 |
| YP_004782453.1 | NC_015938_p78 | hypothetical protein | phrog_10984 | unknown function | unknown function | -1 | 50129 | 50395 |
| YP_004782456.1 | NC_015938_p81 | dCTP deaminase | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | -1 | 51437 | 52024 |
| YP_004782470.1 | NC_015938_p95 | hypothetical protein | phrog_24263 | unknown function | unknown function | -1 | 58870 | 59391 |
| YP_004782516.1 | NC_015938_p141 | hypothetical protein | singleton | unknown function | unknown function | -1 | 84597 | 84878 |
| YP_004782454.1 | NC_015938_p79 | thiol-disulphide isomerase and thioredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 50385 | 50681 |
| YP_004782436.1 | NC_015938_p61 | hypothetical protein | phrog_7020 | unknown function | unknown function | -1 | 43333 | 43533 |
| YP_004782441.1 | NC_015938_p66 | hypothetical protein | singleton | unknown function | unknown function | -1 | 46056 | 46349 |
| YP_004782462.1 | NC_015938_p87 | hypothetical protein | phrog_35303 | unknown function | unknown function | -1 | 56146 | 56334 |
| YP_004782382.1 | NC_015938_p7 | scaffolding protein | phrog_9013 | head scaffolding protein | head and packaging | 1 | 7302 | 8354 |
| YP_004782515.1 | NC_015938_p140 | hypothetical protein | phrog_16376 | unknown function | unknown function | -1 | 84437 | 84595 |
| YP_004782469.1 | NC_015938_p94 | hypothetical protein | phrog_23983 | unknown function | unknown function | -1 | 58234 | 58812 |
| YP_004782391.1 | NC_015938_p16 | hypothetical protein | phrog_13258 | virion structural protein | head and packaging | 1 | 16732 | 16983 |
| YP_004782418.1 | NC_015938_p43 | ATP-dependent DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 34422 | 35510 |
| YP_004782434.1 | NC_015938_p59 | hypothetical protein | phrog_33689 | unknown function | unknown function | -1 | 42913 | 43131 |
| YP_004782440.1 | NC_015938_p65 | hypothetical protein | phrog_23896 | unknown function | unknown function | -1 | 45782 | 46051 |
| YP_004782497.1 | NC_015938_p122 | hypothetical protein | phrog_35316 | unknown function | unknown function | -1 | 76179 | 76883 |
| YP_004782402.1 | NC_015938_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27982 | 29208 |
| YP_004782422.1 | NC_015938_p47 | RNA polymerase ECF sigma factor | phrog_1740 | RNA polymerase sigma factor | transcription regulation | -1 | 37061 | 37618 |
| YP_004782424.1 | NC_015938_p49 | hypothetical protein | phrog_23123 | unknown function | unknown function | -1 | 38585 | 39007 |
| YP_004782500.1 | NC_015938_p125 | ATPase | phrog_2376 | ATPase | other | -1 | 78121 | 79329 |
| YP_004782474.1 | NC_015938_p99 | ATP-grasp enzyme | phrog_2599 | ribosomal protein S6 glutaminyl transferase | moron, auxiliary metabolic gene and host takeover | -1 | 60261 | 61520 |
| YP_004782413.1 | NC_015938_p38 | hypothetical protein | phrog_31847 | unknown function | unknown function | -1 | 33051 | 33221 |
| YP_004782431.1 | NC_015938_p56 | Sir2-like protein | phrog_2162 | Sir2 (NAD-dependent deacetylase) | DNA, RNA and nucleotide metabolism | -1 | 41317 | 42069 |
| YP_004782501.1 | NC_015938_p126 | hypothetical protein | phrog_28397 | unknown function | unknown function | -1 | 79399 | 79587 |
| YP_004782463.1 | NC_015938_p88 | hypothetical protein | phrog_30604 | unknown function | unknown function | -1 | 56321 | 56710 |
| YP_004782411.1 | NC_015938_p36 | hypothetical protein | phrog_38302 | unknown function | unknown function | -1 | 32311 | 32631 |
| YP_004782483.1 | NC_015938_p108 | hypothetical protein | phrog_951 | unknown function | unknown function | -1 | 69279 | 69674 |
| YP_004782406.1 | NC_015938_p31 | hypothetical protein | phrog_35118 | unknown function | unknown function | -1 | 30516 | 30851 |
| YP_004782445.1 | NC_015938_p70 | hypothetical protein | phrog_29481 | unknown function | unknown function | -1 | 47349 | 47519 |
| YP_004782492.1 | NC_015938_p117 | hypothetical protein | singleton | unknown function | unknown function | -1 | 72331 | 72414 |
| YP_004782446.1 | NC_015938_p71 | hypothetical protein | phrog_335 | phosphatase | other | -1 | 47519 | 48019 |
| YP_004782509.1 | NC_015938_p134 | hypothetical protein | phrog_37494 | unknown function | unknown function | -1 | 81939 | 82133 |
| YP_004782432.1 | NC_015938_p57 | hypothetical protein | phrog_757 | DNA methyltransferase | other | -1 | 42062 | 42766 |
| YP_004782514.1 | NC_015938_p139 | hypothetical protein | phrog_2529 | unknown function | unknown function | -1 | 83750 | 84112 |
| YP_004782479.1 | NC_015938_p104 | hypothetical protein | phrog_4877 | unknown function | unknown function | -1 | 65782 | 66387 |
| YP_004782435.1 | NC_015938_p60 | hypothetical protein | phrog_32833 | unknown function | unknown function | -1 | 43128 | 43331 |
| YP_004782503.1 | NC_015938_p128 | hypothetical protein | singleton | unknown function | unknown function | -1 | 79891 | 80106 |
| YP_004782376.1 | NC_015938_p1 | hypothetical protein | phrog_8771 | unknown function | unknown function | 1 | 1750 | 2145 |
| YP_004782377.1 | NC_015938_p2 | hypothetical protein | phrog_2241 | unknown function | unknown function | 1 | 2157 | 2390 |
| YP_004782495.1 | NC_015938_p120 | ribose-phosphate pyrophosphokinase | phrog_619 | ribose-phosphate pyrophosphokinase | other | -1 | 74313 | 75197 |
| YP_004782486.1 | NC_015938_p111 | endolysin | phrog_938 | endolysin | lysis | -1 | 70221 | 70646 |
| YP_004782471.1 | NC_015938_p96 | hypothetical protein | phrog_38607 | unknown function | unknown function | -1 | 59391 | 59597 |
| YP_004782427.1 | NC_015938_p52 | hypothetical protein | phrog_4256 | unknown function | unknown function | -1 | 40104 | 40520 |
| YP_004782392.1 | NC_015938_p17 | structural protein | phrog_6465 | tail protein | tail | 1 | 16980 | 17870 |
| YP_004782484.1 | NC_015938_p109 | hypothetical protein | phrog_26686 | unknown function | unknown function | -1 | 69749 | 69946 |
| YP_004782383.1 | NC_015938_p8 | major head protein | phrog_1328 | major head protein | head and packaging | 1 | 8481 | 9419 |
| YP_004782455.1 | NC_015938_p80 | PhoH-like protein | phrog_170 | PhoH-like phosphate starvation-inducible | other | -1 | 50681 | 51424 |
| YP_004782464.1 | NC_015938_p89 | hypothetical protein | singleton | unknown function | unknown function | -1 | 56824 | 57087 |
| YP_004782403.1 | NC_015938_p28 | hypothetical protein | phrog_35703 | unknown function | unknown function | 1 | 29282 | 29413 |
| YP_004782489.1 | NC_015938_p114 | hypothetical protein | singleton | unknown function | unknown function | -1 | 71573 | 71767 |
| YP_004782397.1 | NC_015938_p22 | hypothetical protein | phrog_25101 | unknown function | unknown function | 1 | 22014 | 22559 |
| YP_004782387.1 | NC_015938_p12 | hypothetical protein | phrog_2941 | virion structural protein | head and packaging | 1 | 11851 | 12540 |
| YP_004782379.1 | NC_015938_p4 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 3217 | 4701 |
| YP_004782390.1 | NC_015938_p15 | hypothetical protein | phrog_27560 | unknown function | unknown function | 1 | 16226 | 16666 |
| YP_004782442.1 | NC_015938_p67 | hypothetical protein | phrog_8562 | unknown function | unknown function | -1 | 46318 | 46776 |
| YP_004782414.1 | NC_015938_p39 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33175 | 33402 |
| YP_004782476.1 | NC_015938_p101 | hypothetical protein | phrog_9477 | unknown function | unknown function | -1 | 61849 | 62073 |
| YP_004782381.1 | NC_015938_p6 | hypothetical protein | phrog_23234 | unknown function | unknown function | 1 | 7075 | 7302 |
| YP_004782439.1 | NC_015938_p64 | hypothetical protein | phrog_1247 | MazG-like pyrophosphatase | other | -1 | 45498 | 45782 |
| YP_004782480.1 | NC_015938_p105 | hypothetical protein | phrog_3815 | COOH.NH2 ligase | other | -1 | 66398 | 67201 |
| YP_004782490.1 | NC_015938_p115 | hypothetical protein | singleton | unknown function | unknown function | -1 | 71795 | 71968 |
| YP_004782508.1 | NC_015938_p133 | hypothetical protein | phrog_28648 | unknown function | unknown function | -1 | 81692 | 81922 |
| YP_004782384.1 | NC_015938_p9 | major head protein | phrog_1328 | major head protein | head and packaging | 1 | 9500 | 11257 |
| YP_004782482.1 | NC_015938_p107 | hypothetical protein | phrog_24882 | unknown function | unknown function | -1 | 68291 | 69202 |
| YP_004782419.1 | NC_015938_p44 | hypothetical protein | phrog_36539 | unknown function | unknown function | -1 | 35558 | 36052 |
| YP_004782425.1 | NC_015938_p50 | endolysin | phrog_465 | endolysin | lysis | -1 | 39019 | 39411 |
| YP_004782507.1 | NC_015938_p132 | hypothetical protein | phrog_6110 | unknown function | unknown function | -1 | 81443 | 81595 |
| YP_004782519.1 | NC_015938_p144 | hypothetical protein | phrog_34279 | unknown function | unknown function | -1 | 85686 | 85928 |