Genomic map of Escherichia phage HK639 (NC_016158)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_016158
Definition
Escherichia phage HK639, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
49576
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
76
%GC
52.45
Number of singletons
6
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_004934100.1 NC_016158_p70 hypothetical protein phrog_1026 Rz-like spanin lysis 1 46511 46786
YP_004934074.1 NC_016158_p44 hypothetical protein phrog_3054 unknown function unknown function -1 33200 33649
YP_004934048.1 NC_016158_p18 hypothetical protein phrog_1651 unknown function unknown function 1 16152 16589
YP_004934086.1 NC_016158_p56 ren-like protein phrog_142 Ren-like exclusion protein moron, auxiliary metabolic gene and host takeover 1 39935 40279
YP_004934066.1 NC_016158_p36 hypothetical protein phrog_11492 unknown function unknown function -1 29808 29975
YP_004934034.1 NC_016158_p4 hypothetical protein phrog_241 head morphogenesis head and packaging 1 3676 4782
YP_004934039.1 NC_016158_p9 hypothetical protein phrog_161 head closure Hc1 connector 1 7624 7977
YP_004934049.1 NC_016158_p19 minor tail protein phrog_14 minor tail protein tail 1 16608 17015
YP_004934038.1 NC_016158_p8 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 7140 7622
YP_004934101.1 NC_016158_p71 hypothetical protein phrog_1275 Rz-like spanin lysis 1 46779 46928
YP_004934033.1 NC_016158_p3 hypothetical protein phrog_145 portal protein head and packaging 1 2274 3674
YP_004934083.1 NC_016158_p53 hypothetical protein phrog_30464 unknown function unknown function 1 37980 38384
YP_004934036.1 NC_016158_p6 hypothetical protein phrog_283 major head protein head and packaging 1 5774 6910
YP_004934031.1 NC_016158_p1 terminase small subunit phrog_1206 terminase small subunit head and packaging 1 51 701
YP_004934058.1 NC_016158_p28 UmuD phrog_811 UmuD-like protein DNA, RNA and nucleotide metabolism 1 25383 25781
YP_004934060.1 NC_016158_p30 hypothetical protein phrog_1690 unknown function unknown function -1 27406 27708
YP_004934098.1 NC_016158_p68 hypothetical protein phrog_217 holin lysis 1 45596 45874
YP_004934093.1 NC_016158_p63 NinE phrog_288 unknown function unknown function 1 42852 43022
YP_004934072.1 NC_016158_p42 hypothetical protein phrog_6396 unknown function unknown function -1 32378 32536
YP_004934078.1 NC_016158_p48 hypothetical protein phrog_3 transcriptional repressor transcription regulation -1 35316 35735
YP_004934092.1 NC_016158_p62 NinB phrog_72 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 42421 42855
YP_004934073.1 NC_016158_p43 hypothetical protein phrog_13608 unknown function unknown function -1 32533 33048
YP_004934079.1 NC_016158_p49 hypothetical protein singleton unknown function unknown function -1 35725 36018
YP_004934050.1 NC_016158_p20 minor tail protein L phrog_18 minor tail protein tail 1 17015 17785
YP_004934091.1 NC_016158_p61 hypothetical protein phrog_23848 unknown function unknown function 1 42012 42233
YP_004934051.1 NC_016158_p21 tail assembly protein K phrog_30 minor tail protein tail 1 17798 18529
YP_004934103.1 NC_016158_p73 rha protein phrog_518 Rha-like transcriptional regulator transcription regulation 1 47343 47903
YP_004934035.1 NC_016158_p5 hypothetical protein phrog_784 unknown function unknown function 1 5004 5756
YP_004934069.1 NC_016158_p39 phage related recombination protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 30888 31808
YP_004934076.1 NC_016158_p46 hypothetical protein phrog_3975 unknown function unknown function 1 34487 34723
YP_004934047.1 NC_016158_p17 hypothetical protein phrog_8416 unknown function unknown function 1 15571 16143
YP_004934099.1 NC_016158_p69 endochitinase phrog_181 endolysin lysis 1 45874 46503
YP_004934088.1 NC_016158_p58 hypothetical protein phrog_5994 unknown function unknown function 1 40812 41042
YP_004934084.1 NC_016158_p54 hypothetical protein phrog_17247 unknown function unknown function 1 38384 39247
YP_004934043.1 NC_016158_p13 hypothetical protein phrog_29765 unknown function unknown function 1 10141 10821
YP_004934067.1 NC_016158_p37 hypothetical protein phrog_1680 unknown function unknown function -1 29972 30400
YP_004934097.1 NC_016158_p67 hypothetical protein phrog_198 holin lysis 1 45217 45606
YP_004934105.1 NC_016158_p75 hypothetical protein phrog_18574 unknown function unknown function 1 49029 49313
YP_004934032.1 NC_016158_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 698 2269
YP_004934080.1 NC_016158_p50 cI phrog_4 transcriptional repressor transcription regulation -1 36292 36981
YP_004934064.1 NC_016158_p34 hypothetical protein phrog_24287 unknown function unknown function -1 28866 29060
YP_004934062.1 NC_016158_p32 hypothetical protein singleton unknown function unknown function -1 28063 28515
YP_004934042.1 NC_016158_p12 major tail protein phrog_584 major tail protein tail 1 9065 9997
YP_004934065.1 NC_016158_p35 adenine specific methyltransferase phrog_359 DNA methyltransferase other -1 29152 29811
YP_004934104.1 NC_016158_p74 hypothetical protein phrog_11600 unknown function unknown function 1 47959 49029
YP_004934046.1 NC_016158_p16 hypothetical protein phrog_890 lipoprotein other 1 14681 15094
YP_004934054.1 NC_016158_p24 hypothetical protein phrog_7961 unknown function unknown function 1 22630 22932
YP_004934075.1 NC_016158_p45 hypothetical protein singleton unknown function unknown function -1 33849 34196
YP_004934102.1 NC_016158_p72 hypothetical protein phrog_717 unknown function unknown function 1 46886 47206
YP_004934106.1 NC_016158_p76 hypothetical protein phrog_4772 unknown function unknown function 1 49323 49559
YP_004934045.1 NC_016158_p15 tail length tape measure protein phrog_24 tail length tape measure protein tail 1 11530 14604
YP_004934095.1 NC_016158_p65 Rus Holliday junction resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 43296 43655
YP_004934085.1 NC_016158_p55 replication protein 14 phrog_109 P-like helicase loader DNA, RNA and nucleotide metabolism 1 39244 39933
YP_004934059.1 NC_016158_p29 integrase phrog_1 integrase integration and excision -1 26022 27185
YP_004934089.1 NC_016158_p59 hypothetical protein phrog_60 unknown function unknown function 1 41039 41551
YP_004934094.1 NC_016158_p64 hypothetical protein phrog_131 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43015 43299
YP_004934090.1 NC_016158_p60 DNA pol III theta phrog_1105 DNA polymerase III theta subunit DNA, RNA and nucleotide metabolism 1 41767 42009
YP_004934053.1 NC_016158_p23 host specificity protein phrog_31 central tail fiber J tail 1 19172 22636
YP_004934068.1 NC_016158_p38 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism -1 30409 30891
YP_004934087.1 NC_016158_p57 eae-like protein phrog_614 unknown function unknown function 1 40276 40815
YP_004934061.1 NC_016158_p31 hypothetical protein singleton unknown function unknown function -1 27750 28016
YP_004934037.1 NC_016158_p7 hypothetical protein phrog_1514 unknown function unknown function 1 6952 7137
YP_004934044.1 NC_016158_p14 hypothetical protein phrog_569 tail length tape measure protein tail 1 10887 11225
YP_004934063.1 NC_016158_p33 hypothetical protein phrog_444 unknown function unknown function -1 28519 28866
YP_004934057.1 NC_016158_p27 phage tail protein phrog_1591 tail fiber protein tail 1 24024 25277
YP_004934077.1 NC_016158_p47 hypothetical protein singleton unknown function unknown function -1 34927 35325
YP_004934041.1 NC_016158_p11 hypothetical protein phrog_179 tail terminator connector 1 8569 9018
YP_004934096.1 NC_016158_p66 Q antitermination protein phrog_943 anti-termination protein Q-like transcription regulation 1 43768 44265
YP_004934081.1 NC_016158_p51 cro phrog_35 transcriptional repressor transcription regulation 1 37092 37319
YP_004934040.1 NC_016158_p10 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 7980 8579
YP_004934056.1 NC_016158_p26 hypothetical protein singleton unknown function unknown function 1 23839 23997
YP_004934082.1 NC_016158_p52 cII phrog_163 CII-like transcriptional activator transcription regulation 1 37349 37894
YP_004934071.1 NC_016158_p41 hypothetical protein phrog_294 Kil protein for bacterial septation inhibition other -1 32175 32381
YP_004934070.1 NC_016158_p40 hypothetical protein phrog_1050 gam-like host nuclease inhibitor moron, auxiliary metabolic gene and host takeover -1 31812 32096
YP_004934052.1 NC_016158_p22 tail assembly protein phrog_32 tail assembly protein tail 1 18517 19116
YP_004934055.1 NC_016158_p25 hypothetical protein phrog_4524 unknown function unknown function 1 22929 23570