| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_016158 |
Definition |
Escherichia phage HK639, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
49576 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
76 |
%GC |
52.45 |
Number of singletons |
6 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_004934100.1 | NC_016158_p70 | hypothetical protein | phrog_1026 | Rz-like spanin | lysis | 1 | 46511 | 46786 |
| YP_004934074.1 | NC_016158_p44 | hypothetical protein | phrog_3054 | unknown function | unknown function | -1 | 33200 | 33649 |
| YP_004934048.1 | NC_016158_p18 | hypothetical protein | phrog_1651 | unknown function | unknown function | 1 | 16152 | 16589 |
| YP_004934086.1 | NC_016158_p56 | ren-like protein | phrog_142 | Ren-like exclusion protein | moron, auxiliary metabolic gene and host takeover | 1 | 39935 | 40279 |
| YP_004934066.1 | NC_016158_p36 | hypothetical protein | phrog_11492 | unknown function | unknown function | -1 | 29808 | 29975 |
| YP_004934034.1 | NC_016158_p4 | hypothetical protein | phrog_241 | head morphogenesis | head and packaging | 1 | 3676 | 4782 |
| YP_004934039.1 | NC_016158_p9 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 7624 | 7977 |
| YP_004934049.1 | NC_016158_p19 | minor tail protein | phrog_14 | minor tail protein | tail | 1 | 16608 | 17015 |
| YP_004934038.1 | NC_016158_p8 | hypothetical protein | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 7140 | 7622 |
| YP_004934101.1 | NC_016158_p71 | hypothetical protein | phrog_1275 | Rz-like spanin | lysis | 1 | 46779 | 46928 |
| YP_004934033.1 | NC_016158_p3 | hypothetical protein | phrog_145 | portal protein | head and packaging | 1 | 2274 | 3674 |
| YP_004934083.1 | NC_016158_p53 | hypothetical protein | phrog_30464 | unknown function | unknown function | 1 | 37980 | 38384 |
| YP_004934036.1 | NC_016158_p6 | hypothetical protein | phrog_283 | major head protein | head and packaging | 1 | 5774 | 6910 |
| YP_004934031.1 | NC_016158_p1 | terminase small subunit | phrog_1206 | terminase small subunit | head and packaging | 1 | 51 | 701 |
| YP_004934058.1 | NC_016158_p28 | UmuD | phrog_811 | UmuD-like protein | DNA, RNA and nucleotide metabolism | 1 | 25383 | 25781 |
| YP_004934060.1 | NC_016158_p30 | hypothetical protein | phrog_1690 | unknown function | unknown function | -1 | 27406 | 27708 |
| YP_004934098.1 | NC_016158_p68 | hypothetical protein | phrog_217 | holin | lysis | 1 | 45596 | 45874 |
| YP_004934093.1 | NC_016158_p63 | NinE | phrog_288 | unknown function | unknown function | 1 | 42852 | 43022 |
| YP_004934072.1 | NC_016158_p42 | hypothetical protein | phrog_6396 | unknown function | unknown function | -1 | 32378 | 32536 |
| YP_004934078.1 | NC_016158_p48 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | -1 | 35316 | 35735 |
| YP_004934092.1 | NC_016158_p62 | NinB | phrog_72 | NinB/ Orf homologous recombination mediator | DNA, RNA and nucleotide metabolism | 1 | 42421 | 42855 |
| YP_004934073.1 | NC_016158_p43 | hypothetical protein | phrog_13608 | unknown function | unknown function | -1 | 32533 | 33048 |
| YP_004934079.1 | NC_016158_p49 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35725 | 36018 |
| YP_004934050.1 | NC_016158_p20 | minor tail protein L | phrog_18 | minor tail protein | tail | 1 | 17015 | 17785 |
| YP_004934091.1 | NC_016158_p61 | hypothetical protein | phrog_23848 | unknown function | unknown function | 1 | 42012 | 42233 |
| YP_004934051.1 | NC_016158_p21 | tail assembly protein K | phrog_30 | minor tail protein | tail | 1 | 17798 | 18529 |
| YP_004934103.1 | NC_016158_p73 | rha protein | phrog_518 | Rha-like transcriptional regulator | transcription regulation | 1 | 47343 | 47903 |
| YP_004934035.1 | NC_016158_p5 | hypothetical protein | phrog_784 | unknown function | unknown function | 1 | 5004 | 5756 |
| YP_004934069.1 | NC_016158_p39 | phage related recombination protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 30888 | 31808 |
| YP_004934076.1 | NC_016158_p46 | hypothetical protein | phrog_3975 | unknown function | unknown function | 1 | 34487 | 34723 |
| YP_004934047.1 | NC_016158_p17 | hypothetical protein | phrog_8416 | unknown function | unknown function | 1 | 15571 | 16143 |
| YP_004934099.1 | NC_016158_p69 | endochitinase | phrog_181 | endolysin | lysis | 1 | 45874 | 46503 |
| YP_004934088.1 | NC_016158_p58 | hypothetical protein | phrog_5994 | unknown function | unknown function | 1 | 40812 | 41042 |
| YP_004934084.1 | NC_016158_p54 | hypothetical protein | phrog_17247 | unknown function | unknown function | 1 | 38384 | 39247 |
| YP_004934043.1 | NC_016158_p13 | hypothetical protein | phrog_29765 | unknown function | unknown function | 1 | 10141 | 10821 |
| YP_004934067.1 | NC_016158_p37 | hypothetical protein | phrog_1680 | unknown function | unknown function | -1 | 29972 | 30400 |
| YP_004934097.1 | NC_016158_p67 | hypothetical protein | phrog_198 | holin | lysis | 1 | 45217 | 45606 |
| YP_004934105.1 | NC_016158_p75 | hypothetical protein | phrog_18574 | unknown function | unknown function | 1 | 49029 | 49313 |
| YP_004934032.1 | NC_016158_p2 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 698 | 2269 |
| YP_004934080.1 | NC_016158_p50 | cI | phrog_4 | transcriptional repressor | transcription regulation | -1 | 36292 | 36981 |
| YP_004934064.1 | NC_016158_p34 | hypothetical protein | phrog_24287 | unknown function | unknown function | -1 | 28866 | 29060 |
| YP_004934062.1 | NC_016158_p32 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28063 | 28515 |
| YP_004934042.1 | NC_016158_p12 | major tail protein | phrog_584 | major tail protein | tail | 1 | 9065 | 9997 |
| YP_004934065.1 | NC_016158_p35 | adenine specific methyltransferase | phrog_359 | DNA methyltransferase | other | -1 | 29152 | 29811 |
| YP_004934104.1 | NC_016158_p74 | hypothetical protein | phrog_11600 | unknown function | unknown function | 1 | 47959 | 49029 |
| YP_004934046.1 | NC_016158_p16 | hypothetical protein | phrog_890 | lipoprotein | other | 1 | 14681 | 15094 |
| YP_004934054.1 | NC_016158_p24 | hypothetical protein | phrog_7961 | unknown function | unknown function | 1 | 22630 | 22932 |
| YP_004934075.1 | NC_016158_p45 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33849 | 34196 |
| YP_004934102.1 | NC_016158_p72 | hypothetical protein | phrog_717 | unknown function | unknown function | 1 | 46886 | 47206 |
| YP_004934106.1 | NC_016158_p76 | hypothetical protein | phrog_4772 | unknown function | unknown function | 1 | 49323 | 49559 |
| YP_004934045.1 | NC_016158_p15 | tail length tape measure protein | phrog_24 | tail length tape measure protein | tail | 1 | 11530 | 14604 |
| YP_004934095.1 | NC_016158_p65 | Rus Holliday junction resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 43296 | 43655 |
| YP_004934085.1 | NC_016158_p55 | replication protein 14 | phrog_109 | P-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 39244 | 39933 |
| YP_004934059.1 | NC_016158_p29 | integrase | phrog_1 | integrase | integration and excision | -1 | 26022 | 27185 |
| YP_004934089.1 | NC_016158_p59 | hypothetical protein | phrog_60 | unknown function | unknown function | 1 | 41039 | 41551 |
| YP_004934094.1 | NC_016158_p64 | hypothetical protein | phrog_131 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 43015 | 43299 |
| YP_004934090.1 | NC_016158_p60 | DNA pol III theta | phrog_1105 | DNA polymerase III theta subunit | DNA, RNA and nucleotide metabolism | 1 | 41767 | 42009 |
| YP_004934053.1 | NC_016158_p23 | host specificity protein | phrog_31 | central tail fiber J | tail | 1 | 19172 | 22636 |
| YP_004934068.1 | NC_016158_p38 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | -1 | 30409 | 30891 |
| YP_004934087.1 | NC_016158_p57 | eae-like protein | phrog_614 | unknown function | unknown function | 1 | 40276 | 40815 |
| YP_004934061.1 | NC_016158_p31 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27750 | 28016 |
| YP_004934037.1 | NC_016158_p7 | hypothetical protein | phrog_1514 | unknown function | unknown function | 1 | 6952 | 7137 |
| YP_004934044.1 | NC_016158_p14 | hypothetical protein | phrog_569 | tail length tape measure protein | tail | 1 | 10887 | 11225 |
| YP_004934063.1 | NC_016158_p33 | hypothetical protein | phrog_444 | unknown function | unknown function | -1 | 28519 | 28866 |
| YP_004934057.1 | NC_016158_p27 | phage tail protein | phrog_1591 | tail fiber protein | tail | 1 | 24024 | 25277 |
| YP_004934077.1 | NC_016158_p47 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34927 | 35325 |
| YP_004934041.1 | NC_016158_p11 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 8569 | 9018 |
| YP_004934096.1 | NC_016158_p66 | Q antitermination protein | phrog_943 | anti-termination protein Q-like | transcription regulation | 1 | 43768 | 44265 |
| YP_004934081.1 | NC_016158_p51 | cro | phrog_35 | transcriptional repressor | transcription regulation | 1 | 37092 | 37319 |
| YP_004934040.1 | NC_016158_p10 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 7980 | 8579 |
| YP_004934056.1 | NC_016158_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23839 | 23997 |
| YP_004934082.1 | NC_016158_p52 | cII | phrog_163 | CII-like transcriptional activator | transcription regulation | 1 | 37349 | 37894 |
| YP_004934071.1 | NC_016158_p41 | hypothetical protein | phrog_294 | Kil protein for bacterial septation inhibition | other | -1 | 32175 | 32381 |
| YP_004934070.1 | NC_016158_p40 | hypothetical protein | phrog_1050 | gam-like host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | -1 | 31812 | 32096 |
| YP_004934052.1 | NC_016158_p22 | tail assembly protein | phrog_32 | tail assembly protein | tail | 1 | 18517 | 19116 |
| YP_004934055.1 | NC_016158_p25 | hypothetical protein | phrog_4524 | unknown function | unknown function | 1 | 22929 | 23570 |