Genomic map of Gordonia phage GTE5 (NC_016434)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_016434
Definition
Gordonia phage GTE5, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
65839
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
92
%GC
65.05
Number of singletons
7
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_004935755.1 NC_016434_p24 hypothetical protein phrog_12236 head-tail connector protein connector 1 14770 15120
YP_004935782.1 NC_016434_p51 hypothetical protein phrog_13496 thioredoxin domain DNA, RNA and nucleotide metabolism -1 42754 43260
YP_004935742.1 NC_016434_p11 hypothetical protein phrog_21562 tail protein tail 1 3460 5433
YP_004935809.1 NC_016434_p78 hypothetical protein phrog_13451 unknown function unknown function 1 58002 58256
YP_004935778.1 NC_016434_p47 hypothetical protein phrog_1981 unknown function unknown function -1 38190 38936
YP_004935748.1 NC_016434_p17 head protein phrog_1522 head maturation protease head and packaging 1 9843 11228
YP_004935789.1 NC_016434_p58 hypothetical protein phrog_3848 unknown function unknown function -1 47281 47643
YP_004935751.1 NC_016434_p20 main capsid protein phrog_29 major head protein head and packaging 1 12384 13445
YP_004935743.1 NC_016434_p12 hypothetical protein phrog_13218 unknown function unknown function 1 5454 5636
YP_004935790.1 NC_016434_p59 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 47640 49067
YP_004935759.1 NC_016434_p28 tail assembly protein phrog_2624 tail assembly chaperone tail 1 16818 17117
YP_004935759.1 NC_016434_p28 tail assembly protein phrog_2624 tail assembly chaperone tail 1 17117 17629
YP_004935802.1 NC_016434_p71 hypothetical protein phrog_16405 membrane protein moron, auxiliary metabolic gene and host takeover 1 54889 55575
YP_004935814.1 NC_016434_p83 hypothetical protein phrog_14603 unknown function unknown function 1 61428 61838
YP_004935787.1 NC_016434_p56 hypothetical protein phrog_13499 unknown function unknown function -1 46735 47070
YP_004935818.1 NC_016434_p87 hypothetical protein phrog_1374 unknown function unknown function 1 63789 63998
YP_004935781.1 NC_016434_p50 hypothetical protein phrog_7933 unknown function unknown function -1 42533 42757
YP_004935758.1 NC_016434_p27 hypothetical protein phrog_14117 virion structural protein head and packaging 1 16432 16794
YP_004935776.1 NC_016434_p45 hypothetical protein phrog_13050 unknown function unknown function -1 37433 37696
YP_004935771.1 NC_016434_p40 holin phrog_3428 holin lysis 1 32933 33247
YP_004935783.1 NC_016434_p52 hypothetical protein phrog_13965 unknown function unknown function -1 43333 44217
YP_004935797.1 NC_016434_p66 hypothetical protein singleton unknown function unknown function 1 52567 52851
YP_004935747.1 NC_016434_p16 portal protein phrog_104 portal protein head and packaging 1 8269 9846
YP_004935779.1 NC_016434_p48 DNA polymerase III alpha subunit phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism -1 38933 42214
YP_004935812.1 NC_016434_p81 hypothetical protein singleton unknown function unknown function 1 59675 59950
YP_004935757.1 NC_016434_p26 main tail protein phrog_476 major tail protein tail 1 15663 16346
YP_004935760.1 NC_016434_p29 tape measure protein phrog_6090 tail length tape measure protein tail 1 17717 23122
YP_004935820.1 NC_016434_p89 hypothetical protein phrog_25654 unknown function unknown function 1 64633 64908
YP_004935763.1 NC_016434_p32 minor tail protein phrog_4120 minor tail protein tail 1 25695 26804
YP_004935765.1 NC_016434_p34 carbohydrate binding domain protein phrog_8373 unknown function unknown function 1 29375 29539
YP_004935804.1 NC_016434_p73 hypothetical protein phrog_18547 unknown function unknown function 1 56009 56578
YP_004935739.1 NC_016434_p8 hypothetical protein phrog_14439 unknown function unknown function 1 2149 2331
YP_004935805.1 NC_016434_p74 hypothetical protein phrog_15206 unknown function unknown function 1 56575 56742
YP_004935806.1 NC_016434_p75 hypothetical protein phrog_20867 unknown function unknown function 1 56739 57425
YP_004935800.1 NC_016434_p69 hypothetical protein phrog_10850 unknown function unknown function 1 53879 54112
YP_004935801.1 NC_016434_p70 hypothetical protein phrog_15177 unknown function unknown function 1 54128 54859
YP_004935746.1 NC_016434_p15 terminase large subunit phrog_9 terminase large subunit head and packaging 1 6550 8226
YP_004935816.1 NC_016434_p85 hypothetical protein phrog_13626 unknown function unknown function 1 63211 63474
YP_004935786.1 NC_016434_p55 hypothetical protein phrog_4160 unknown function unknown function -1 46242 46745
YP_004935745.1 NC_016434_p14 terminase small subunit phrog_7785 HNH endonuclease DNA, RNA and nucleotide metabolism 1 6100 6531
YP_004935768.1 NC_016434_p37 hypothetical protein phrog_240 head protein head and packaging 1 30882 31223
YP_004935819.1 NC_016434_p88 hypothetical protein phrog_14019 unknown function unknown function 1 63995 64636
YP_004935791.1 NC_016434_p60 transcriptional regulator phrog_14304 transcriptional regulator WhiB-like transcription regulation -1 49526 50149
YP_004935753.1 NC_016434_p22 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 13921 14376
YP_004935798.1 NC_016434_p67 hypothetical protein singleton unknown function unknown function 1 52937 53458
YP_004935796.1 NC_016434_p65 hypothetical protein phrog_12059 unknown function unknown function -1 51349 52365
YP_004935762.1 NC_016434_p31 minor tail protein phrog_110 minor tail protein tail 1 24044 25663
YP_004935741.1 NC_016434_p10 hypothetical protein phrog_6439 unknown function unknown function 1 3209 3460
YP_004935764.1 NC_016434_p33 hypothetical protein phrog_746 minor tail protein tail 1 26806 29361
YP_004935807.1 NC_016434_p76 hypothetical protein phrog_20357 unknown function unknown function 1 57468 57581
YP_004935785.1 NC_016434_p54 hypothetical protein phrog_1218 exonuclease DNA, RNA and nucleotide metabolism -1 45064 46020
YP_004935744.1 NC_016434_p13 hypothetical protein phrog_18398 unknown function unknown function 1 5633 6103
YP_004935734.1 NC_016434_p3 hypothetical protein phrog_12539 unknown function unknown function 1 748 1053
YP_004935777.1 NC_016434_p46 DNA binding excisionase protein phrog_1729 unknown function unknown function -1 37711 38169
YP_004935737.1 NC_016434_p6 hypothetical protein phrog_13455 unknown function unknown function 1 1516 1779
YP_004935803.1 NC_016434_p72 hypothetical protein phrog_35654 unknown function unknown function 1 55650 55928
YP_004935808.1 NC_016434_p77 hypothetical protein phrog_26507 unknown function unknown function 1 57674 57952
YP_004935733.1 NC_016434_p2 hypothetical protein phrog_15936 membrane protein moron, auxiliary metabolic gene and host takeover 1 305 751
YP_004935754.1 NC_016434_p23 hypothetical protein phrog_12740 head closure Hc1 connector 1 14376 14780
YP_004935749.1 NC_016434_p18 hypothetical protein phrog_12880 head scaffolding protein head and packaging 1 11225 11905
YP_004935821.1 NC_016434_p90 hypothetical protein phrog_2089 unknown function unknown function 1 64905 65159
YP_004935767.1 NC_016434_p36 hypothetical protein phrog_6030 unknown function unknown function 1 30576 30878
YP_004935822.1 NC_016434_p91 hypothetical protein phrog_13327 unknown function unknown function 1 65218 65568
YP_004935792.1 NC_016434_p61 hypothetical protein phrog_10718 unknown function unknown function -1 50146 50310
YP_004935736.1 NC_016434_p5 hypothetical protein phrog_15162 membrane protein moron, auxiliary metabolic gene and host takeover 1 1421 1519
YP_004935773.1 NC_016434_p42 hypothetical protein phrog_726 unknown function unknown function 1 33736 34173
YP_004935774.1 NC_016434_p43 primase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism -1 34156 36717
YP_004935761.1 NC_016434_p30 minor tail protein phrog_106 minor tail protein tail 1 23122 24039
YP_004935817.1 NC_016434_p86 hypothetical protein phrog_20759 unknown function unknown function 1 63462 63755
YP_004935769.1 NC_016434_p38 lysis protein phrog_6007 endolysin lysis 1 31282 31914
YP_004935735.1 NC_016434_p4 hypothetical protein phrog_13444 unknown function unknown function 1 1050 1424
YP_004935766.1 NC_016434_p35 hypothetical protein phrog_416 minor tail protein tail 1 29539 30600
YP_004935810.1 NC_016434_p79 hypothetical protein singleton unknown function unknown function 1 58260 58574
YP_004935788.1 NC_016434_p57 hypothetical protein phrog_14384 unknown function unknown function -1 47108 47230
YP_004935732.1 NC_016434_p1 hypothetical protein phrog_23039 unknown function unknown function 1 55 249
YP_004935793.1 NC_016434_p62 hypothetical protein phrog_14499 membrane protein moron, auxiliary metabolic gene and host takeover -1 50351 50458
YP_004935770.1 NC_016434_p39 lysis protein phrog_9506 endolysin lysis 1 31911 32936
YP_004935794.1 NC_016434_p63 hypothetical protein phrog_5392 unknown function unknown function -1 50473 50838
YP_004935795.1 NC_016434_p64 hypothetical protein phrog_14599 unknown function unknown function -1 50872 51345
YP_004935811.1 NC_016434_p80 hypothetical protein singleton unknown function unknown function 1 59143 59442
YP_004935740.1 NC_016434_p9 hypothetical protein phrog_102 endolysin lysis 1 2331 3101
YP_004935756.1 NC_016434_p25 hypothetical protein phrog_123 tail terminator connector 1 15117 15632
YP_004935752.1 NC_016434_p21 hypothetical protein phrog_6587 head-tail connector protein connector 1 13447 13881
YP_004935780.1 NC_016434_p49 hypothetical protein singleton unknown function unknown function -1 42217 42459
YP_004935823.1 NC_016434_p92 hypothetical protein singleton unknown function unknown function 1 65525 65704
YP_004935815.1 NC_016434_p84 hypothetical protein phrog_20553 unknown function unknown function 1 61835 63214
YP_004935784.1 NC_016434_p53 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 44234 45013
YP_004935775.1 NC_016434_p44 hypothetical protein phrog_14298 unknown function unknown function -1 36719 37126
YP_004935738.1 NC_016434_p7 hypothetical protein phrog_16183 unknown function unknown function 1 1785 2138
YP_004935750.1 NC_016434_p19 hypothetical protein phrog_3583 head decoration head and packaging 1 11921 12340
YP_004935772.1 NC_016434_p41 hypothetical protein phrog_1298 minor tail protein tail 1 33174 33761
YP_004935799.1 NC_016434_p68 hypothetical protein phrog_13959 unknown function unknown function 1 53451 53867
YP_004935813.1 NC_016434_p82 hypothetical protein phrog_226 minor tail protein tail 1 60179 60772